| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is wrbA [H]
Identifier: 66046932
GI number: 66046932
Start: 4390342
End: 4390947
Strand: Direct
Name: wrbA [H]
Synonym: Psyr_3703
Alternate gene names: 66046932
Gene position: 4390342-4390947 (Clockwise)
Preceding gene: 66046931
Following gene: 66046933
Centisome position: 72.05
GC content: 67.16
Gene sequence:
>606_bases GTGAGCACACCCTACATTCTGGTCCTTTATTACAGCCGCAACGGTTCCACCAGCGAAATGGCCCGGCAGGTTGCCCGCGG CATCGAACTGGGCGGCATGGAAGCGCGGTTGCGCACCGTGCCCGCCGTTTCCGCCGACTGCGAAGCGACCGCCCCCGAGA TTCCGGAAAGCGGCGCGCTGTACGCGACCCTCGACGACCTGAAAAACTGCTCCGGCCTGGCACTGGGCAGCCCGACGCGC TTCGGCAACATGGCCGCGCCGCTGAAATACTTCCTCGACGGCACCAGCAACCTGTGGCTGACCGGCGCACTGGTCGGCAA ACCGGCTGGCGTCTTTACCTCCACCGCCAGCCTGCACGGCGGTCAGGAAACCACGCTGATGTCGATGCTGCTGCCCCTTC TGCACCACGGCATGCTGATCATGGGCCTGCCCTACAGCGAATCGGCGCTGCTGGAAACCACCGGGGGTGGCACGCCCTAC GGTCCCAGCCATCACGCCGGTGCCGACGGCAAGCGCGCGCTGGACCGTCATGAAACCGACCTGTGCCGCGCGCTGGGCCA GCGTCTGGCCAAGACCGCGGTGCAACTGGACGCGCCGCGCAGCTGA
Upstream 100 bases:
>100_bases CCATGGCCGCTCACCCCAAACTCATCGAACGACCGATTCTGGTCGCTGGCGACAAGGCTGTCATTGGCCGCCCACCCGAG AACATTCTGGAGCTGCTGCC
Downstream 100 bases:
>100_bases ACCGGCAGAACGCCGGGGGCTTTCAGTTAAATCGTAAACTTGCAGGGCAAGGGTCGGTCTGAACCCTTGTCCTGCCTGTT GAATTTCTTTGGAGAACCGA
Product: flavodoxin/nitric oxide synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MSTPYILVLYYSRNGSTSEMARQVARGIELGGMEARLRTVPAVSADCEATAPEIPESGALYATLDDLKNCSGLALGSPTR FGNMAAPLKYFLDGTSNLWLTGALVGKPAGVFTSTASLHGGQETTLMSMLLPLLHHGMLIMGLPYSESALLETTGGGTPY GPSHHAGADGKRALDRHETDLCRALGQRLAKTAVQLDAPRS
Sequences:
>Translated_201_residues MSTPYILVLYYSRNGSTSEMARQVARGIELGGMEARLRTVPAVSADCEATAPEIPESGALYATLDDLKNCSGLALGSPTR FGNMAAPLKYFLDGTSNLWLTGALVGKPAGVFTSTASLHGGQETTLMSMLLPLLHHGMLIMGLPYSESALLETTGGGTPY GPSHHAGADGKRALDRHETDLCRALGQRLAKTAVQLDAPRS >Mature_200_residues STPYILVLYYSRNGSTSEMARQVARGIELGGMEARLRTVPAVSADCEATAPEIPESGALYATLDDLKNCSGLALGSPTRF GNMAAPLKYFLDGTSNLWLTGALVGKPAGVFTSTASLHGGQETTLMSMLLPLLHHGMLIMGLPYSESALLETTGGGTPYG PSHHAGADGKRALDRHETDLCRALGQRLAKTAVQLDAPRS
Specific function: Seems To Enhance The Formation And/Or Stability Of Noncovalent Complexes Between The Trp Repressor Protein And Operator-Bearing DNA. However, Wrba Does Not Specifically Influence The Affinity Or Mode Of Binding Of Trpr To Its Operator. It Seems Possible T
COG id: COG0655
COG function: function code R; Multimeric flavodoxin WrbA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 flavodoxin-like domain [H]
Homologues:
Organism=Escherichia coli, GI1787239, Length=201, Percent_Identity=39.8009950248756, Blast_Score=128, Evalue=3e-31, Organism=Saccharomyces cerevisiae, GI6319849, Length=198, Percent_Identity=35.8585858585859, Blast_Score=110, Evalue=2e-25, Organism=Saccharomyces cerevisiae, GI6320235, Length=204, Percent_Identity=32.843137254902, Blast_Score=97, Evalue=2e-21, Organism=Saccharomyces cerevisiae, GI6319526, Length=185, Percent_Identity=32.972972972973, Blast_Score=83, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008254 - InterPro: IPR010089 - InterPro: IPR005025 [H]
Pfam domain/function: PF03358 FMN_red [H]
EC number: NA
Molecular weight: Translated: 21162; Mature: 21031
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: PS00201 FLAVODOXIN ; PS50902 FLAVODOXIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPYILVLYYSRNGSTSEMARQVARGIELGGMEARLRTVPAVSADCEATAPEIPESGAL CCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCE YATLDDLKNCSGLALGSPTRFGNMAAPLKYFLDGTSNLWLTGALVGKPAGVFTSTASLHG EEEHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCEECCHHCCC GQETTLMSMLLPLLHHGMLIMGLPYSESALLETTGGGTPYGPSHHAGADGKRALDRHETD CCHHHHHHHHHHHHHCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH LCRALGQRLAKTAVQLDAPRS HHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure STPYILVLYYSRNGSTSEMARQVARGIELGGMEARLRTVPAVSADCEATAPEIPESGAL CCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCE YATLDDLKNCSGLALGSPTRFGNMAAPLKYFLDGTSNLWLTGALVGKPAGVFTSTASLHG EEEHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCEECCHHCCC GQETTLMSMLLPLLHHGMLIMGLPYSESALLETTGGGTPYGPSHHAGADGKRALDRHETD CCHHHHHHHHHHHHHCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH LCRALGQRLAKTAVQLDAPRS HHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA