Click here to switch to the map view.

The map label for this gene is ycaK [C]

Identifier: 66046891

GI number: 66046891

Start: 4348896

End: 4349510

Strand: Direct

Name: ycaK [C]

Synonym: Psyr_3662

Alternate gene names: 66046891

Gene position: 4348896-4349510 (Clockwise)

Preceding gene: 66046890

Following gene: 66046894

Centisome position: 71.37

GC content: 61.46

Gene sequence:

>615_bases
ATGGCTGATGCCAGAAGCGGCGCAACGCCACTGGAAGGCAATGGCAAACGAATCCTGATGGTCTACGGCACGCCGAAGGC
CATCAGTTTCTGCCACGCCCTGGGTGACGCCTACGCGCAAACGGCGCGTGGCGAAGGGCATGTGGTGCGGGTCATCAAGC
TGGGCGAACTGGACTTCGATCCGATTCTGCACAATGGCTACGATCAGACTCAAACCCTTGAGCCCGACCTGCTCGAAGCC
CAGCGCCAGATTCACTGGGCCGAGCACCTGGTCTTCGTCTATCCGGTCTGGTGGGGCGGCTTGCCGGCGTTGTTGACGGG
CTTTTTCGACCGGGTGCTGACACCCGGTTTTGCGTTCAAGGTCCACGGCCGCAAGCACTCATCCAATGAACTGCTTCGCG
GCCGGACAGCTGAGCTGCTGGTCGCCATGGACACGCCGCCGCGCTACTTTCACTGGATCTACGGCGCGCCGGCTCACCGG
CAGATGGTACGGACCATACTCGGCTTTTGCGGGATAAAGACCAAACGTCTGACCGAGTTTGCTCCGGTACACAGCGCCAG
CGAACAGCAGCGCCAGGAATGGATTATTCAGGCGCAGGGGCTGGGCAGACGCTGA

Upstream 100 bases:

>100_bases
GGTCTGACCCTGCGCGAAGCGGCATTGGCGCTGGGTTACCTGACCGATGAAGAGTTCGATGCCTGGGTGCGGCCGGACAA
AATGCTCGAGGCAGGCAGTA

Downstream 100 bases:

>100_bases
TCTGCCCCGCCACCCACCAGTCAGGCCTGTGCCAGCCGGGCCTTGCGTGCCCTGAGGCCGGCGACCAGCGAAGGGCCAAG
CGCAGTCAGCGCCGACCCGG

Product: NAD(P)H dehydrogenase (quinone)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 203

Protein sequence:

>204_residues
MADARSGATPLEGNGKRILMVYGTPKAISFCHALGDAYAQTARGEGHVVRVIKLGELDFDPILHNGYDQTQTLEPDLLEA
QRQIHWAEHLVFVYPVWWGGLPALLTGFFDRVLTPGFAFKVHGRKHSSNELLRGRTAELLVAMDTPPRYFHWIYGAPAHR
QMVRTILGFCGIKTKRLTEFAPVHSASEQQRQEWIIQAQGLGRR

Sequences:

>Translated_204_residues
MADARSGATPLEGNGKRILMVYGTPKAISFCHALGDAYAQTARGEGHVVRVIKLGELDFDPILHNGYDQTQTLEPDLLEA
QRQIHWAEHLVFVYPVWWGGLPALLTGFFDRVLTPGFAFKVHGRKHSSNELLRGRTAELLVAMDTPPRYFHWIYGAPAHR
QMVRTILGFCGIKTKRLTEFAPVHSASEQQRQEWIIQAQGLGRR
>Mature_203_residues
ADARSGATPLEGNGKRILMVYGTPKAISFCHALGDAYAQTARGEGHVVRVIKLGELDFDPILHNGYDQTQTLEPDLLEAQ
RQIHWAEHLVFVYPVWWGGLPALLTGFFDRVLTPGFAFKVHGRKHSSNELLRGRTAELLVAMDTPPRYFHWIYGAPAHRQ
MVRTILGFCGIKTKRLTEFAPVHSASEQQRQEWIIQAQGLGRR

Specific function: Unknown

COG id: COG2249

COG function: function code R; Putative NADPH-quinone reductase (modulator of drug activity B)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NAD(P)H dehydrogenase (quinone) family [H]

Homologues:

Organism=Homo sapiens, GI156564357, Length=212, Percent_Identity=27.8301886792453, Blast_Score=71, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003680 [H]

Pfam domain/function: PF02525 Flavodoxin_2 [H]

EC number: 1.6.99.- [C]

Molecular weight: Translated: 22985; Mature: 22853

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADARSGATPLEGNGKRILMVYGTPKAISFCHALGDAYAQTARGEGHVVRVIKLGELDFD
CCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCC
PILHNGYDQTQTLEPDLLEAQRQIHWAEHLVFVYPVWWGGLPALLTGFFDRVLTPGFAFK
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEEHHHCCHHHHHHHHHHHHHCCCEEEE
VHGRKHSSNELLRGRTAELLVAMDTPPRYFHWIYGAPAHRQMVRTILGFCGIKTKRLTEF
EECCCCCCCHHHCCCCEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHH
APVHSASEQQRQEWIIQAQGLGRR
CCCCCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ADARSGATPLEGNGKRILMVYGTPKAISFCHALGDAYAQTARGEGHVVRVIKLGELDFD
CCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCC
PILHNGYDQTQTLEPDLLEAQRQIHWAEHLVFVYPVWWGGLPALLTGFFDRVLTPGFAFK
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEEHHHCCHHHHHHHHHHHHHCCCEEEE
VHGRKHSSNELLRGRTAELLVAMDTPPRYFHWIYGAPAHRQMVRTILGFCGIKTKRLTEF
EECCCCCCCHHHCCCCEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHH
APVHSASEQQRQEWIIQAQGLGRR
CCCCCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]