| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66046889
Identifier: 66046889
GI number: 66046889
Start: 4346812
End: 4347339
Strand: Reverse
Name: 66046889
Synonym: Psyr_3660
Alternate gene names: NA
Gene position: 4347339-4346812 (Counterclockwise)
Preceding gene: 66046892
Following gene: 66046888
Centisome position: 71.34
GC content: 59.09
Gene sequence:
>528_bases ATGACCCGTCTTCGTGCCATTTGTACCGCGGTAGCCCTGGTCTGTGCCAGCGGCCAGGTCTTCGCCGACACCGCCAGTCA CAACGCGAGCGCCGAAACGTTCCTGAAGCTTGCCAACGCCGATCGCCTGGGCGCTCCGGTCTACGCTCAGGTTCAGCAGA TGTTCGCTCAGCGTTTTGCTGAAACCAAGGCACCTGCGTCGAAAAAAGCCCTGCTTGAAACCTATCAGGCCAAAGCCAAC ACCGCTCTGGACCAAGCCATTGGCTGGAACAAGCTCAAGCCCGAGATGGTCAAGCTGTACACCGCAAACTTCACCGAAAG CGAGCTGAAGGATCTGGTCGCGTTCTACCAGTCGCCACTGGGCAAGAAAGTGATGACCAAGATGCCTGAGCTGGCTCAGC AGTCGGCCCAGCTGACCCAGAGCAAGCTGGAAAGCGCTGTTCCGGTGGTCAACAAGCTGCTGGCTGACATGACTGCCGAA CTGGAACCTGCCAAGGCAGCTGCTCCGGCTCCGGCCAAAAAGCCCTGA
Upstream 100 bases:
>100_bases TTTTAACCGCTGGGTGAACCGGGGGTTGAGCCAAAAGCCCAGATAAGCGCAGAATGGTCGGCCCTGGGGTAATGCCTCGT TTGCTAGATAAGGAAACTCG
Downstream 100 bases:
>100_bases CAGGCGATTTCCATCATGACCATGCAACAACGAATCGAGTCGGCGCTTGCGCTGCTGCAACCGCACCACCTGCAAGTACT CGACGAGAGTCATATGCACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MTRLRAICTAVALVCASGQVFADTASHNASAETFLKLANADRLGAPVYAQVQQMFAQRFAETKAPASKKALLETYQAKAN TALDQAIGWNKLKPEMVKLYTANFTESELKDLVAFYQSPLGKKVMTKMPELAQQSAQLTQSKLESAVPVVNKLLADMTAE LEPAKAAAPAPAKKP
Sequences:
>Translated_175_residues MTRLRAICTAVALVCASGQVFADTASHNASAETFLKLANADRLGAPVYAQVQQMFAQRFAETKAPASKKALLETYQAKAN TALDQAIGWNKLKPEMVKLYTANFTESELKDLVAFYQSPLGKKVMTKMPELAQQSAQLTQSKLESAVPVVNKLLADMTAE LEPAKAAAPAPAKKP >Mature_174_residues TRLRAICTAVALVCASGQVFADTASHNASAETFLKLANADRLGAPVYAQVQQMFAQRFAETKAPASKKALLETYQAKANT ALDQAIGWNKLKPEMVKLYTANFTESELKDLVAFYQSPLGKKVMTKMPELAQQSAQLTQSKLESAVPVVNKLLADMTAEL EPAKAAAPAPAKKP
Specific function: Unknown
COG id: COG3184
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18843; Mature: 18712
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRLRAICTAVALVCASGQVFADTASHNASAETFLKLANADRLGAPVYAQVQQMFAQRFA CHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH ETKAPASKKALLETYQAKANTALDQAIGWNKLKPEMVKLYTANFTESELKDLVAFYQSPL HHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCC GKKVMTKMPELAQQSAQLTQSKLESAVPVVNKLLADMTAELEPAKAAAPAPAKKP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCC >Mature Secondary Structure TRLRAICTAVALVCASGQVFADTASHNASAETFLKLANADRLGAPVYAQVQQMFAQRFA HHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH ETKAPASKKALLETYQAKANTALDQAIGWNKLKPEMVKLYTANFTESELKDLVAFYQSPL HHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCC GKKVMTKMPELAQQSAQLTQSKLESAVPVVNKLLADMTAELEPAKAAAPAPAKKP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA