| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is bolA [H]
Identifier: 66046888
GI number: 66046888
Start: 4346503
End: 4346796
Strand: Reverse
Name: bolA [H]
Synonym: Psyr_3659
Alternate gene names: 66046888
Gene position: 4346796-4346503 (Counterclockwise)
Preceding gene: 66046889
Following gene: 66046887
Centisome position: 71.33
GC content: 59.18
Gene sequence:
>294_bases ATGACCATGCAACAACGAATCGAGTCGGCGCTTGCGCTGCTGCAACCGCACCACCTGCAAGTACTCGACGAGAGTCATAT GCACAGTCGTGGTCAGCAGACCCATTACAAGGCGGTTCTGGTCAGTGACCAGTTTCAGGGCCTGAACTCTGTCAAGCGGC ACCAGAAGGTCTACGCCACGCTGGGCCCGCTCATGGGCGAGTTTCATGCACTGGCGTTGCACACCTACACGCCTGAAGAA TGGTCGAAGGTCGGTACAGCGCCTGCTTCACCGACCTGCGCCGGCGGGCATTGA
Upstream 100 bases:
>100_bases GGTGGTCAACAAGCTGCTGGCTGACATGACTGCCGAACTGGAACCTGCCAAGGCAGCTGCTCCGGCTCCGGCCAAAAAGC CCTGACAGGCGATTTCCATC
Downstream 100 bases:
>100_bases TCAGGGCTTTTTACTGATCCTGCCCCCTTGCCGGGGGCGATTGCCCCGCCGAGCTGTCTGCTGCACTCCGGTTTTTGCTA GAATCCGCACCGCGCCGCCT
Product: BolA-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 97; Mature: 96
Protein sequence:
>97_residues MTMQQRIESALALLQPHHLQVLDESHMHSRGQQTHYKAVLVSDQFQGLNSVKRHQKVYATLGPLMGEFHALALHTYTPEE WSKVGTAPASPTCAGGH
Sequences:
>Translated_97_residues MTMQQRIESALALLQPHHLQVLDESHMHSRGQQTHYKAVLVSDQFQGLNSVKRHQKVYATLGPLMGEFHALALHTYTPEE WSKVGTAPASPTCAGGH >Mature_96_residues TMQQRIESALALLQPHHLQVLDESHMHSRGQQTHYKAVLVSDQFQGLNSVKRHQKVYATLGPLMGEFHALALHTYTPEEW SKVGTAPASPTCAGGH
Specific function: Plays an important role in general stress response (heat shock, acidic stress, oxidative stress, carbon-starvation stress and osmotic shock). Involved in morphogenetic pathway. Has a role in the induction of the expression of dacA (PBP5), dacC (PBP6) and
COG id: COG0271
COG function: function code T; Stress-induced morphogen (activity unknown)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bolA/yrbA family [H]
Homologues:
Organism=Homo sapiens, GI7705638, Length=98, Percent_Identity=35.7142857142857, Blast_Score=63, Evalue=4e-11, Organism=Escherichia coli, GI87081740, Length=101, Percent_Identity=46.5346534653465, Blast_Score=84, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002634 [H]
Pfam domain/function: PF01722 BolA [H]
EC number: NA
Molecular weight: Translated: 10769; Mature: 10638
Theoretical pI: Translated: 7.87; Mature: 7.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMQQRIESALALLQPHHLQVLDESHMHSRGQQTHYKAVLVSDQFQGLNSVKRHQKVYAT CCHHHHHHHHHHHHCCHHHHHHCHHHHHCCCCCCHHHEEEECHHHCCHHHHHHHHHHHHH LGPLMGEFHALALHTYTPEEWSKVGTAPASPTCAGGH HHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure TMQQRIESALALLQPHHLQVLDESHMHSRGQQTHYKAVLVSDQFQGLNSVKRHQKVYAT CHHHHHHHHHHHHCCHHHHHHCHHHHHCCCCCCHHHEEEECHHHCCHHHHHHHHHHHHH LGPLMGEFHALALHTYTPEEWSKVGTAPASPTCAGGH HHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]