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The map label for this gene is yfbQ [H]

Identifier: 66046844

GI number: 66046844

Start: 4298906

End: 4300117

Strand: Direct

Name: yfbQ [H]

Synonym: Psyr_3615

Alternate gene names: 66046844

Gene position: 4298906-4300117 (Clockwise)

Preceding gene: 66046841

Following gene: 66046845

Centisome position: 70.55

GC content: 59.9

Gene sequence:

>1212_bases
ATGCAGTTCAACAAATCGAACAAGCTCGCAAACGTCTGCTATGACATTCGCGGGCCGGTGCTCAAGCACGCCAAACGCCT
GGAAGAGGAAGGTCACCGCATCCTCAAGCTGAACATCGGCAACCCGGCGCCGTTTGGTTTCGAGGCGCCGGACGAAATTC
TGCAGGACGTGATCCGCAACTTGCCGACTGCGCAGGGCTACAGCGACTCCAAGGGCCTGTTCAGCGCCCGCAAGGCGGTG
ATGCAGTATTACCAGCAGAAGCAGGTCGAAGGCGTCGGCATCGAAGACATCTACCTGGGCAACGGCGTGTCCGAGCTGAT
CGTGATGTCGATGCAGGCGTTGCTCAACAATGGCGACGAAGTGCTGGTTCCGGCCCCCGACTACCCGCTGTGGACCGCTG
CTGTCGCCTTGTCCGGTGGCAGCCCGGTGCACTACCTGTGCGACGAACAGGCCAACTGGTGGCCTGATCTTGAAGACATC
AAGGCCAAGATCACCCCGAACACCAAGGCCATGGTCATCATCAACCCGAACAACCCGACAGGTGCGGTGTATTCGCGCGA
AGTACTGCTGGGCATGCTGGAGCTGGCTCGCCAGCATAATCTGGTGGTGTTCTCCGACGAAATCTACGACAAGATCCTGT
ATGACGACGCGGTACACATCTGCACCGCCTCGCTGGCGCCGGACCTGCTGTGCCTGACCTTCAACGGCCTGTCCAAGTCG
TATCGGGTTGCGGGCTTCCGCTCCGGCTGGATCGCCATTTCCGGGCCGAAACACAACGCGCAGAGCTACATCGAAGGCAT
CGACATTCTGGCCAACATGCGCCTGTGTGCCAACGTACCGAGCCAGCACGCCATCCAGACCGCGCTGGGCGGCTATCAGA
GCATCAATGATCTGATTCTTCCCCCTGGCCGTCTGCTGGAACAGCGCAACCGCACCTGGGAGCTGCTCAACGACATTCCC
GGTGTCAGCTGCGTGAAGCCGATGGGCGCGCTGTATGCGTTCCCGCGCATTGACCCGAAAGTCTGCCCGATCCTCAACGA
CGAGAAGTTCGTCCTCGACCTGCTGCTTTCCGAAAAACTGCTGGTGGTTCAGGGTACAGCGTTCAATTGGCCATACCCCG
ACCACTTCCGCGTCGTGACCCTGCCCCGCGTCGATGAACTGGAGCAGGCCATTGGCCGCATCGGTAACTTCCTCAAGGGT
TATCGGCAGTAA

Upstream 100 bases:

>100_bases
CTGGCACCCGCGTTTGTCGTACACAAACCCATTTTCATGGCGAATGTAGCGACCTTCATTGCAAGCCGGCGACAGCTCGT
CCATTTTCGGGATCATCACC

Downstream 100 bases:

>100_bases
ACAGCCACAGCGCTCTCCCCCGACCTCTCTGCCCCGACCCGCTCGGGGCAGTTTATTTCTGTGCGCCCGAAACATCATGG
ACGCCCTGCCCCAAACGCTT

Product: aminotransferase AlaT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MQFNKSNKLANVCYDIRGPVLKHAKRLEEEGHRILKLNIGNPAPFGFEAPDEILQDVIRNLPTAQGYSDSKGLFSARKAV
MQYYQQKQVEGVGIEDIYLGNGVSELIVMSMQALLNNGDEVLVPAPDYPLWTAAVALSGGSPVHYLCDEQANWWPDLEDI
KAKITPNTKAMVIINPNNPTGAVYSREVLLGMLELARQHNLVVFSDEIYDKILYDDAVHICTASLAPDLLCLTFNGLSKS
YRVAGFRSGWIAISGPKHNAQSYIEGIDILANMRLCANVPSQHAIQTALGGYQSINDLILPPGRLLEQRNRTWELLNDIP
GVSCVKPMGALYAFPRIDPKVCPILNDEKFVLDLLLSEKLLVVQGTAFNWPYPDHFRVVTLPRVDELEQAIGRIGNFLKG
YRQ

Sequences:

>Translated_403_residues
MQFNKSNKLANVCYDIRGPVLKHAKRLEEEGHRILKLNIGNPAPFGFEAPDEILQDVIRNLPTAQGYSDSKGLFSARKAV
MQYYQQKQVEGVGIEDIYLGNGVSELIVMSMQALLNNGDEVLVPAPDYPLWTAAVALSGGSPVHYLCDEQANWWPDLEDI
KAKITPNTKAMVIINPNNPTGAVYSREVLLGMLELARQHNLVVFSDEIYDKILYDDAVHICTASLAPDLLCLTFNGLSKS
YRVAGFRSGWIAISGPKHNAQSYIEGIDILANMRLCANVPSQHAIQTALGGYQSINDLILPPGRLLEQRNRTWELLNDIP
GVSCVKPMGALYAFPRIDPKVCPILNDEKFVLDLLLSEKLLVVQGTAFNWPYPDHFRVVTLPRVDELEQAIGRIGNFLKG
YRQ
>Mature_403_residues
MQFNKSNKLANVCYDIRGPVLKHAKRLEEEGHRILKLNIGNPAPFGFEAPDEILQDVIRNLPTAQGYSDSKGLFSARKAV
MQYYQQKQVEGVGIEDIYLGNGVSELIVMSMQALLNNGDEVLVPAPDYPLWTAAVALSGGSPVHYLCDEQANWWPDLEDI
KAKITPNTKAMVIINPNNPTGAVYSREVLLGMLELARQHNLVVFSDEIYDKILYDDAVHICTASLAPDLLCLTFNGLSKS
YRVAGFRSGWIAISGPKHNAQSYIEGIDILANMRLCANVPSQHAIQTALGGYQSINDLILPPGRLLEQRNRTWELLNDIP
GVSCVKPMGALYAFPRIDPKVCPILNDEKFVLDLLLSEKLLVVQGTAFNWPYPDHFRVVTLPRVDELEQAIGRIGNFLKG
YRQ

Specific function: Unknown

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI4507369, Length=377, Percent_Identity=28.9124668435013, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI19263340, Length=465, Percent_Identity=26.0215053763441, Blast_Score=124, Evalue=1e-28,
Organism=Homo sapiens, GI215599424, Length=370, Percent_Identity=27.5675675675676, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI4885351, Length=447, Percent_Identity=24.8322147651007, Blast_Score=119, Evalue=4e-27,
Organism=Homo sapiens, GI95147551, Length=243, Percent_Identity=27.9835390946502, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI169881279, Length=243, Percent_Identity=27.9835390946502, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI56713256, Length=330, Percent_Identity=25.4545454545455, Blast_Score=90, Evalue=4e-18,
Organism=Homo sapiens, GI56713254, Length=330, Percent_Identity=25.4545454545455, Blast_Score=89, Evalue=5e-18,
Organism=Homo sapiens, GI169881281, Length=150, Percent_Identity=32.6666666666667, Blast_Score=82, Evalue=6e-16,
Organism=Escherichia coli, GI1788627, Length=399, Percent_Identity=72.9323308270677, Blast_Score=632, Evalue=0.0,
Organism=Escherichia coli, GI1788722, Length=408, Percent_Identity=25.7352941176471, Blast_Score=104, Evalue=8e-24,
Organism=Escherichia coli, GI1786816, Length=235, Percent_Identity=24.2553191489362, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1787909, Length=219, Percent_Identity=23.2876712328767, Blast_Score=62, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI17567663, Length=370, Percent_Identity=28.9189189189189, Blast_Score=148, Evalue=6e-36,
Organism=Caenorhabditis elegans, GI71981209, Length=477, Percent_Identity=24.9475890985325, Blast_Score=112, Evalue=4e-25,
Organism=Caenorhabditis elegans, GI71994472, Length=184, Percent_Identity=32.6086956521739, Blast_Score=92, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI71994476, Length=184, Percent_Identity=32.6086956521739, Blast_Score=92, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI71981215, Length=308, Percent_Identity=26.9480519480519, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17567369, Length=234, Percent_Identity=29.4871794871795, Blast_Score=89, Evalue=6e-18,
Organism=Saccharomyces cerevisiae, GI6320317, Length=355, Percent_Identity=27.3239436619718, Blast_Score=114, Evalue=2e-26,
Organism=Saccharomyces cerevisiae, GI6323118, Length=365, Percent_Identity=27.1232876712329, Blast_Score=114, Evalue=3e-26,
Organism=Saccharomyces cerevisiae, GI6322401, Length=284, Percent_Identity=28.8732394366197, Blast_Score=105, Evalue=1e-23,
Organism=Drosophila melanogaster, GI18859735, Length=375, Percent_Identity=27.7333333333333, Blast_Score=147, Evalue=1e-35,
Organism=Drosophila melanogaster, GI45551451, Length=468, Percent_Identity=25.2136752136752, Blast_Score=119, Evalue=3e-27,
Organism=Drosophila melanogaster, GI24641770, Length=468, Percent_Identity=25.2136752136752, Blast_Score=119, Evalue=3e-27,
Organism=Drosophila melanogaster, GI24641760, Length=468, Percent_Identity=25.2136752136752, Blast_Score=119, Evalue=3e-27,
Organism=Drosophila melanogaster, GI24641768, Length=468, Percent_Identity=25.2136752136752, Blast_Score=119, Evalue=3e-27,
Organism=Drosophila melanogaster, GI24641766, Length=468, Percent_Identity=25.2136752136752, Blast_Score=119, Evalue=3e-27,
Organism=Drosophila melanogaster, GI24641764, Length=468, Percent_Identity=25.2136752136752, Blast_Score=119, Evalue=3e-27,
Organism=Drosophila melanogaster, GI28573069, Length=167, Percent_Identity=26.9461077844311, Blast_Score=79, Evalue=5e-15,
Organism=Drosophila melanogaster, GI24646114, Length=167, Percent_Identity=26.9461077844311, Blast_Score=79, Evalue=5e-15,
Organism=Drosophila melanogaster, GI28573067, Length=167, Percent_Identity=26.9461077844311, Blast_Score=79, Evalue=5e-15,
Organism=Drosophila melanogaster, GI28573065, Length=167, Percent_Identity=26.9461077844311, Blast_Score=79, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001176
- InterPro:   IPR004839
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: 2.6.1.- [C]

Molecular weight: Translated: 44857; Mature: 44857

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFNKSNKLANVCYDIRGPVLKHAKRLEEEGHRILKLNIGNPAPFGFEAPDEILQDVIRN
CCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHH
LPTAQGYSDSKGLFSARKAVMQYYQQKQVEGVGIEDIYLGNGVSELIVMSMQALLNNGDE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCE
VLVPAPDYPLWTAAVALSGGSPVHYLCDEQANWWPDLEDIKAKITPNTKAMVIINPNNPT
EEEECCCCCHHHHEEEECCCCCEEEEECCCCCCCCCHHHCEEEECCCCEEEEEECCCCCC
GAVYSREVLLGMLELARQHNLVVFSDEIYDKILYDDAVHICTASLAPDLLCLTFNGLSKS
CCHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC
YRVAGFRSGWIAISGPKHNAQSYIEGIDILANMRLCANVPSQHAIQTALGGYQSINDLIL
EEEEEECCCEEEEECCCCCHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHCCHHHCCCCCC
PPGRLLEQRNRTWELLNDIPGVSCVKPMGALYAFPRIDPKVCPILNDEKFVLDLLLSEKL
CCHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCE
LVVQGTAFNWPYPDHFRVVTLPRVDELEQAIGRIGNFLKGYRQ
EEEECCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQFNKSNKLANVCYDIRGPVLKHAKRLEEEGHRILKLNIGNPAPFGFEAPDEILQDVIRN
CCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHH
LPTAQGYSDSKGLFSARKAVMQYYQQKQVEGVGIEDIYLGNGVSELIVMSMQALLNNGDE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCE
VLVPAPDYPLWTAAVALSGGSPVHYLCDEQANWWPDLEDIKAKITPNTKAMVIINPNNPT
EEEECCCCCHHHHEEEECCCCCEEEEECCCCCCCCCHHHCEEEECCCCEEEEEECCCCCC
GAVYSREVLLGMLELARQHNLVVFSDEIYDKILYDDAVHICTASLAPDLLCLTFNGLSKS
CCHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC
YRVAGFRSGWIAISGPKHNAQSYIEGIDILANMRLCANVPSQHAIQTALGGYQSINDLIL
EEEEEECCCEEEEECCCCCHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHCCHHHCCCCCC
PPGRLLEQRNRTWELLNDIPGVSCVKPMGALYAFPRIDPKVCPILNDEKFVLDLLLSEKL
CCHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCE
LVVQGTAFNWPYPDHFRVVTLPRVDELEQAIGRIGNFLKGYRQ
EEEECCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Pyridoxal Phosphate. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]