| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
Click here to switch to the map view.
The map label for this gene is trkG [H]
Identifier: 66046822
GI number: 66046822
Start: 4274197
End: 4275651
Strand: Direct
Name: trkG [H]
Synonym: Psyr_3593
Alternate gene names: 66046822
Gene position: 4274197-4275651 (Clockwise)
Preceding gene: 66046820
Following gene: 66046823
Centisome position: 70.14
GC content: 59.66
Gene sequence:
>1455_bases ATGTCGTTGCCGACCTTGCGTATCATCGGTTTCATTATCGGCATCTTCCTGATCACCCTGGCTGTTGCCATGATCGTACC CATGGCCACGCTGGTCATCTACGACCGTTTCGAAGACCTGCGCGAGTTTCTCTGGGCCAGCGCCATCACCTTTATCGCCG GCCTGGCGCTGGTGGTGCCCGGACGTCCCGACAACGTTCAGTTGCGCCCGCGGGACATGTACATGCTGACCGTCTCCAGC TGGATCGTGGTATGCATTTTTGCCGCCCTGCCCTTTCTGCTGACCCAGCACATCAGTTACACCGACTCGTTCTTCGAGAG CATGTCCGGCATCACGGCCACCGGCTCGACAGTACTCAGCAACCTGGACAGCATGTCACCGGGCATTCTGATCTGGCGTT CGATGCTGCACTGGCTGGGCGGTATCGGCTTCATCGGTATGGCCGTGGCGATTCTGCCCTTGCTGCGCATCGGCGGCATG CGTCTGTTTCAGACCGAGTCCTCGGACCGCTCGGAAAAGGTCATGCCCCGCTCGCACATGGTGGCCAAGTTCATCGTGCT CGCCTACGTGGGCTTTACCGCGCTGGGCAGCCTGGCTTTCTGGGCGGCGGGCATGAGTCTGTTCGACGCGATCAACCATG CGATGTCGGCGATTTCCACCGGCGGGTTCTCTACCTCCGACCAGTCGCTGGCTAAGTGGCCGCAACCGGCGGTGCACTGG GTGGCGATCGTGGTGATGATCCTCGGCAGCCTGCCCTTTACCCTGTATGTCGCGACCCTGCGCGGCAACCGTAAGGCGTT GATCAAGGATGAGCAGGTTCAGGGCCTGATCGGGTTGCTGTTGATTACCTGGCTGGTCATGACCGTCTGGTACGCCAATA CCACGGACCTGCCGTGGACCGAGGCGCTGCGCCATGTCGCGCTGAACGTGACCTCGGTGGTGACCACGACGGGTTTTGCA CTCGGTGACTACAGCCTGTGGGGCAACTTCTCGCTGATGTTGTTCTTTTATCTGGGCTTTATCGGCGGCTGTTCCGGCTC GACAGCGGGCGGAGTGAAGATCTTTCGCTTTCAGGTGGCCTACATTCTGCTCAAGACCAACCTCAATCAACTGATCCATC CGCGCGCGGTGATCAAGCAGAAATACAACGGCCATCGGCTGGACGACGAGATCGTGCGCTCGATCCTGACCTTTTCGTTT TTCTTCACGATCACTATCTGTCTGATCGCGCTGATGCTGTCGCTGCTCGGGCTGGACTGGATGACTGCGCTGACTGGCGC TGCCAGTACGGTATCGGGTGTGGGACCAGGGCTGGGTGAGGTCATCGGGCCGGCGGGCAATTTCTCTACCCTGCCGGATG CGGCCAAATGGATTCTGTCCGGCGGTATGCTGCTTGGCCGTCTGGAAATCATTACTGTGCTAGTGCTCTGTGTACCGGCA TTCTGGCGGCATTGA
Upstream 100 bases:
>100_bases CGTTACCTCTGCGCTTGCAGCCGGTCCTCGGCCGCGCCGGTTTACATGCCCTCAAGCGCAGGTAGAATGGCGCCTTTCCT CACACCAGCCAGAGCCTGTC
Downstream 100 bases:
>100_bases GGCCTGGCAGAGACCGCGGGCAAGGCATTATTTATCGTCCCCATGCTGCGCGTGGGCATGCAGTTCGTGACGCTCCGCGT CACACCCCGGCTCTGCGATG
Product: K+ transporter Trk
Products: Proton [Cytoplasm]; K (I) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 484; Mature: 483
Protein sequence:
>484_residues MSLPTLRIIGFIIGIFLITLAVAMIVPMATLVIYDRFEDLREFLWASAITFIAGLALVVPGRPDNVQLRPRDMYMLTVSS WIVVCIFAALPFLLTQHISYTDSFFESMSGITATGSTVLSNLDSMSPGILIWRSMLHWLGGIGFIGMAVAILPLLRIGGM RLFQTESSDRSEKVMPRSHMVAKFIVLAYVGFTALGSLAFWAAGMSLFDAINHAMSAISTGGFSTSDQSLAKWPQPAVHW VAIVVMILGSLPFTLYVATLRGNRKALIKDEQVQGLIGLLLITWLVMTVWYANTTDLPWTEALRHVALNVTSVVTTTGFA LGDYSLWGNFSLMLFFYLGFIGGCSGSTAGGVKIFRFQVAYILLKTNLNQLIHPRAVIKQKYNGHRLDDEIVRSILTFSF FFTITICLIALMLSLLGLDWMTALTGAASTVSGVGPGLGEVIGPAGNFSTLPDAAKWILSGGMLLGRLEIITVLVLCVPA FWRH
Sequences:
>Translated_484_residues MSLPTLRIIGFIIGIFLITLAVAMIVPMATLVIYDRFEDLREFLWASAITFIAGLALVVPGRPDNVQLRPRDMYMLTVSS WIVVCIFAALPFLLTQHISYTDSFFESMSGITATGSTVLSNLDSMSPGILIWRSMLHWLGGIGFIGMAVAILPLLRIGGM RLFQTESSDRSEKVMPRSHMVAKFIVLAYVGFTALGSLAFWAAGMSLFDAINHAMSAISTGGFSTSDQSLAKWPQPAVHW VAIVVMILGSLPFTLYVATLRGNRKALIKDEQVQGLIGLLLITWLVMTVWYANTTDLPWTEALRHVALNVTSVVTTTGFA LGDYSLWGNFSLMLFFYLGFIGGCSGSTAGGVKIFRFQVAYILLKTNLNQLIHPRAVIKQKYNGHRLDDEIVRSILTFSF FFTITICLIALMLSLLGLDWMTALTGAASTVSGVGPGLGEVIGPAGNFSTLPDAAKWILSGGMLLGRLEIITVLVLCVPA FWRH >Mature_483_residues SLPTLRIIGFIIGIFLITLAVAMIVPMATLVIYDRFEDLREFLWASAITFIAGLALVVPGRPDNVQLRPRDMYMLTVSSW IVVCIFAALPFLLTQHISYTDSFFESMSGITATGSTVLSNLDSMSPGILIWRSMLHWLGGIGFIGMAVAILPLLRIGGMR LFQTESSDRSEKVMPRSHMVAKFIVLAYVGFTALGSLAFWAAGMSLFDAINHAMSAISTGGFSTSDQSLAKWPQPAVHWV AIVVMILGSLPFTLYVATLRGNRKALIKDEQVQGLIGLLLITWLVMTVWYANTTDLPWTEALRHVALNVTSVVTTTGFAL GDYSLWGNFSLMLFFYLGFIGGCSGSTAGGVKIFRFQVAYILLKTNLNQLIHPRAVIKQKYNGHRLDDEIVRSILTFSFF FTITICLIALMLSLLGLDWMTALTGAASTVSGVGPGLGEVIGPAGNFSTLPDAAKWILSGGMLLGRLEIITVLVLCVPAF WRH
Specific function: Low-affinity potassium transport system. Interacts with trk system potassium uptake protein trkA. TrkE increases the affinity of the system [H]
COG id: COG0168
COG function: function code P; Trk-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trkH potassium transport family [H]
Homologues:
Organism=Escherichia coli, GI1787626, Length=490, Percent_Identity=32.4489795918367, Blast_Score=243, Evalue=3e-65, Organism=Escherichia coli, GI48994987, Length=491, Percent_Identity=35.030549898167, Blast_Score=231, Evalue=6e-62,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003445 - InterPro: IPR004772 [H]
Pfam domain/function: PF02386 TrkH [H]
EC number: NA
Molecular weight: Translated: 52896; Mature: 52765
Theoretical pI: Translated: 8.85; Mature: 8.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPTLRIIGFIIGIFLITLAVAMIVPMATLVIYDRFEDLREFLWASAITFIAGLALVVP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC GRPDNVQLRPRDMYMLTVSSWIVVCIFAALPFLLTQHISYTDSFFESMSGITATGSTVLS CCCCCCEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH NLDSMSPGILIWRSMLHWLGGIGFIGMAVAILPLLRIGGMRLFQTESSDRSEKVMPRSHM HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHCCCHHHH VAKFIVLAYVGFTALGSLAFWAAGMSLFDAINHAMSAISTGGFSTSDQSLAKWPQPAVHW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHH VAIVVMILGSLPFTLYVATLRGNRKALIKDEQVQGLIGLLLITWLVMTVWYANTTDLPWT HHHHHHHHCCCCHHHEEEHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH EALRHVALNVTSVVTTTGFALGDYSLWGNFSLMLFFYLGFIGGCSGSTAGGVKIFRFQVA HHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH YILLKTNLNQLIHPRAVIKQKYNGHRLDDEIVRSILTFSFFFTITICLIALMLSLLGLDW HHHHHHHHHHHHCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MTALTGAASTVSGVGPGLGEVIGPAGNFSTLPDAAKWILSGGMLLGRLEIITVLVLCVPA HHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHH FWRH HHCC >Mature Secondary Structure SLPTLRIIGFIIGIFLITLAVAMIVPMATLVIYDRFEDLREFLWASAITFIAGLALVVP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC GRPDNVQLRPRDMYMLTVSSWIVVCIFAALPFLLTQHISYTDSFFESMSGITATGSTVLS CCCCCCEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH NLDSMSPGILIWRSMLHWLGGIGFIGMAVAILPLLRIGGMRLFQTESSDRSEKVMPRSHM HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHCCCHHHH VAKFIVLAYVGFTALGSLAFWAAGMSLFDAINHAMSAISTGGFSTSDQSLAKWPQPAVHW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHH VAIVVMILGSLPFTLYVATLRGNRKALIKDEQVQGLIGLLLITWLVMTVWYANTTDLPWT HHHHHHHHCCCCHHHEEEHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH EALRHVALNVTSVVTTTGFALGDYSLWGNFSLMLFFYLGFIGGCSGSTAGGVKIFRFQVA HHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH YILLKTNLNQLIHPRAVIKQKYNGHRLDDEIVRSILTFSFFFTITICLIALMLSLLGLDW HHHHHHHHHHHHCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MTALTGAASTVSGVGPGLGEVIGPAGNFSTLPDAAKWILSGGMLLGRLEIITVLVLCVPA HHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHH FWRH HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; K (I) [Periplasm] [C]
Specific reaction: Proton [Periplasm] + K (I) [Periplasm] = Proton [Cytoplasm] + K (I) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2022616; 9097039; 9278503 [H]