Click here to switch to the map view.

The map label for this gene is 66046776

Identifier: 66046776

GI number: 66046776

Start: 4224580

End: 4225143

Strand: Reverse

Name: 66046776

Synonym: Psyr_3547

Alternate gene names: NA

Gene position: 4225143-4224580 (Counterclockwise)

Preceding gene: 66046777

Following gene: 66046774

Centisome position: 69.34

GC content: 60.11

Gene sequence:

>564_bases
ATGACCATCAACGCCCGTGAGGCGATCCTGCTTGCTGCGAGAAACATTGCCCAGTCGCAGGGCTACAACGGCCTGAACTT
TCGCGATCTGGCCGCTCAGGTCGGAATCAAGCCGGCCAGTATTTACTACCACTTCCCCAGCAAGGCTGATCTGGGTGTCG
CGGTTGCCAGGCGATACTGGCAGGATGGTGCCGCTGCACTCGAGACGATCTCCGCAGAAACCCCCGATCCCGGCGAAGCG
TTACAGCGTTTCCCGGAAGTTTTCCGGCGTTCGCTGGAGGTTGAAAACCGCCTTTGCCTGGGCACTTTCGTCGGCGCTGA
AACCGACAACCTGCCGCCTGAGATGACCGAGGAAATGCAGCTATTCGCCCAGGTCAACATTGCCTGGTTGAGCAAGCTTC
TGGTGGCTGCGAAGGTTTGCGCGCCCTCGGACAGCGAGGTGCGGGCGCAGGCCATTTTTTCCGCTGTGGCGGGCGCTCAA
CTGGTTGCCAGAAGCAGGTCGGATATTTCCCTTTTTGACACGTTGATCGACACCTATCGTGCCTGCGGGCCGCTGCCGGC
CTAG

Upstream 100 bases:

>100_bases
CGCTGCCATGCCCACACCGTCTTTCTACCTAACAAAAGGCAGGTTTTTGAATTAGCATGTGTCGGTTTCCAGAAACGCGT
CCGAAGTACAAGGCACTACG

Downstream 100 bases:

>100_bases
AGGCCCGCCGCTCTGCGTCCATCAGGCGAGAGGCTGATTAACTGCCGCGCCCCTCGTAGCCTCGAGGATCCGCCCGGCAT
CCTGGGCCGGGGGAAGTCCG

Product: regulatory protein, TetR

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Transcriptional Regulatory Protein; Regulatory Protein TetR; TetR Family Regulatory Protein; HTH-Type Transcriptional Regulator; Transcriptional Regulator Protein; TetR/AcrR Family Transcriptional Regulator; Transcriptional Regulator Protein TetR Family; TetR-Family Transcriptional Regulator; Transcriptional Regulator Of TetR Family Protein; HTH-Type Protein SlmA; Transcriptional Regulator Protein Tetr Family

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MTINAREAILLAARNIAQSQGYNGLNFRDLAAQVGIKPASIYYHFPSKADLGVAVARRYWQDGAAALETISAETPDPGEA
LQRFPEVFRRSLEVENRLCLGTFVGAETDNLPPEMTEEMQLFAQVNIAWLSKLLVAAKVCAPSDSEVRAQAIFSAVAGAQ
LVARSRSDISLFDTLIDTYRACGPLPA

Sequences:

>Translated_187_residues
MTINAREAILLAARNIAQSQGYNGLNFRDLAAQVGIKPASIYYHFPSKADLGVAVARRYWQDGAAALETISAETPDPGEA
LQRFPEVFRRSLEVENRLCLGTFVGAETDNLPPEMTEEMQLFAQVNIAWLSKLLVAAKVCAPSDSEVRAQAIFSAVAGAQ
LVARSRSDISLFDTLIDTYRACGPLPA
>Mature_186_residues
TINAREAILLAARNIAQSQGYNGLNFRDLAAQVGIKPASIYYHFPSKADLGVAVARRYWQDGAAALETISAETPDPGEAL
QRFPEVFRRSLEVENRLCLGTFVGAETDNLPPEMTEEMQLFAQVNIAWLSKLLVAAKVCAPSDSEVRAQAIFSAVAGAQL
VARSRSDISLFDTLIDTYRACGPLPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20303; Mature: 20172

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTINAREAILLAARNIAQSQGYNGLNFRDLAAQVGIKPASIYYHFPSKADLGVAVARRYW
CCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHH
QDGAAALETISAETPDPGEALQRFPEVFRRSLEVENRLCLGTFVGAETDNLPPEMTEEMQ
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEHHEECCCCCCCCHHHHHHHH
LFAQVNIAWLSKLLVAAKVCAPSDSEVRAQAIFSAVAGAQLVARSRSDISLFDTLIDTYR
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
ACGPLPA
HCCCCCC
>Mature Secondary Structure 
TINAREAILLAARNIAQSQGYNGLNFRDLAAQVGIKPASIYYHFPSKADLGVAVARRYW
CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHH
QDGAAALETISAETPDPGEALQRFPEVFRRSLEVENRLCLGTFVGAETDNLPPEMTEEMQ
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEHHEECCCCCCCCHHHHHHHH
LFAQVNIAWLSKLLVAAKVCAPSDSEVRAQAIFSAVAGAQLVARSRSDISLFDTLIDTYR
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
ACGPLPA
HCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA