| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66046766
Identifier: 66046766
GI number: 66046766
Start: 4215199
End: 4216062
Strand: Reverse
Name: 66046766
Synonym: Psyr_3537
Alternate gene names: NA
Gene position: 4216062-4215199 (Counterclockwise)
Preceding gene: 66046771
Following gene: 66046765
Centisome position: 69.19
GC content: 57.06
Gene sequence:
>864_bases ATGAGCGACATCATCAAGAGGCTTCGACTATTGACGCTGCGCGGCACGTTCACGCTGATCAGCCGTATTCTACCGGGCAT CACTGGAAGATATCTCGCTCGACGTTTTGTGACTCCGCAGGCGTCCGGATGTGCCAAGGCTGCTGAAATTCTGAGTACAG CGACGGATGTGCAAACCGGTAGCCTTGAACTGGACGGCATCAGAATTGCCACCTATGTCTGGGGCGATCCCTCCAGCCAG CCGTATGTGTTGCTGGCCCACGGCTGGTCAAGTTACGCGATGCGGTTTATCGGATGGGTGCCGTTACTGCGCTCCATGGG CTACGCCGTGGTGGGGTTCGATCAGCCCGCGCACGGGTTGAGCGCGGGCAGCATCAGTCATATGACCCAGTTCGTGGCTG TGCAGCAGCACGTGGGACGCCATTTCGGAAAGCCTTCGGCGGTGATAGCGCATTCACTCGGCGCTTCATCGATTGTTTTC GCTCAGGAACAGTCGTGGCGCCCCGAGCGTTTTATCCTGATTGCGCCGCTCCTGGCACCTACGGACAGCGTATTTCAACA GTTCGACTCAGTCGGTGTTGCCCACAAAGTATTCAAACCTTTCGAGGCCGTCCTGCATTCGCTGACCGGTCGCCGCTTTG CAGACTACGACGCCACTTCGCGACTGCCGCTGCTTGATCGTCCCGCCCTGATCATTCATGACCGCCGTGACCGCGAAACA CCGTGGGAAAAGGGCGCTCGTTTTGCAGAACTATGGCCGGGGGCGCGTCTGTTTACTACTGAAGGGCTTGGCCACAATCG GTTGATTGATCATCCATCGGTGATAGACGAAGTGATGAAGTTTCTGAAACCGGATCATCGTTAA
Upstream 100 bases:
>100_bases GAAACAAAAGTTATATTCCCGTCGGCTCAGCCTATCTTGTCAGTGACAAGATAGGCTGTTCTAATGGTGCCAGATCATCT GACGGGTGTGGGGAATACCG
Downstream 100 bases:
>100_bases CGGCATCCGCAACGGATGGCCTTTCCAACGATTCCACTCTAAAGCGTCTACACGCAGCTTCATGAAATCCGTATGTGCCA GTTGGACCTGGCTCGTTTAA
Product: hydrolase
Products: NA
Alternate protein names: Hydrolase Or Acyltransferase; Esterase/Lipase; Hydrolase Protein; Alpha/Beta Superfamily Hydrolase/Acyltransferase; Alpha/Beta Fold Superfamily Hydrolase; Alpha/Beta Hydrolase Fold Protein; Lysophospholipase
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MSDIIKRLRLLTLRGTFTLISRILPGITGRYLARRFVTPQASGCAKAAEILSTATDVQTGSLELDGIRIATYVWGDPSSQ PYVLLAHGWSSYAMRFIGWVPLLRSMGYAVVGFDQPAHGLSAGSISHMTQFVAVQQHVGRHFGKPSAVIAHSLGASSIVF AQEQSWRPERFILIAPLLAPTDSVFQQFDSVGVAHKVFKPFEAVLHSLTGRRFADYDATSRLPLLDRPALIIHDRRDRET PWEKGARFAELWPGARLFTTEGLGHNRLIDHPSVIDEVMKFLKPDHR
Sequences:
>Translated_287_residues MSDIIKRLRLLTLRGTFTLISRILPGITGRYLARRFVTPQASGCAKAAEILSTATDVQTGSLELDGIRIATYVWGDPSSQ PYVLLAHGWSSYAMRFIGWVPLLRSMGYAVVGFDQPAHGLSAGSISHMTQFVAVQQHVGRHFGKPSAVIAHSLGASSIVF AQEQSWRPERFILIAPLLAPTDSVFQQFDSVGVAHKVFKPFEAVLHSLTGRRFADYDATSRLPLLDRPALIIHDRRDRET PWEKGARFAELWPGARLFTTEGLGHNRLIDHPSVIDEVMKFLKPDHR >Mature_286_residues SDIIKRLRLLTLRGTFTLISRILPGITGRYLARRFVTPQASGCAKAAEILSTATDVQTGSLELDGIRIATYVWGDPSSQP YVLLAHGWSSYAMRFIGWVPLLRSMGYAVVGFDQPAHGLSAGSISHMTQFVAVQQHVGRHFGKPSAVIAHSLGASSIVFA QEQSWRPERFILIAPLLAPTDSVFQQFDSVGVAHKVFKPFEAVLHSLTGRRFADYDATSRLPLLDRPALIIHDRRDRETP WEKGARFAELWPGARLFTTEGLGHNRLIDHPSVIDEVMKFLKPDHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31950; Mature: 31819
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDIIKRLRLLTLRGTFTLISRILPGITGRYLARRFVTPQASGCAKAAEILSTATDVQTG CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC SLELDGIRIATYVWGDPSSQPYVLLAHGWSSYAMRFIGWVPLLRSMGYAVVGFDQPAHGL CEEECCEEEEEEEECCCCCCCEEEEEECHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCC SAGSISHMTQFVAVQQHVGRHFGKPSAVIAHSLGASSIVFAQEQSWRPERFILIAPLLAP CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEECCCCCCCCEEEEEECCCCC TDSVFQQFDSVGVAHKVFKPFEAVLHSLTGRRFADYDATSRLPLLDRPALIIHDRRDRET CHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCEEEEECCCCCCC PWEKGARFAELWPGARLFTTEGLGHNRLIDHPSVIDEVMKFLKPDHR CHHHCCCHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure SDIIKRLRLLTLRGTFTLISRILPGITGRYLARRFVTPQASGCAKAAEILSTATDVQTG HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC SLELDGIRIATYVWGDPSSQPYVLLAHGWSSYAMRFIGWVPLLRSMGYAVVGFDQPAHGL CEEECCEEEEEEEECCCCCCCEEEEEECHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCC SAGSISHMTQFVAVQQHVGRHFGKPSAVIAHSLGASSIVFAQEQSWRPERFILIAPLLAP CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEECCCCCCCCEEEEEECCCCC TDSVFQQFDSVGVAHKVFKPFEAVLHSLTGRRFADYDATSRLPLLDRPALIIHDRRDRET CHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCEEEEECCCCCCC PWEKGARFAELWPGARLFTTEGLGHNRLIDHPSVIDEVMKFLKPDHR CHHHCCCHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA