| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
Click here to switch to the map view.
The map label for this gene is pucI [H]
Identifier: 66046760
GI number: 66046760
Start: 4207489
End: 4208940
Strand: Direct
Name: pucI [H]
Synonym: Psyr_3531
Alternate gene names: 66046760
Gene position: 4207489-4208940 (Clockwise)
Preceding gene: 66046757
Following gene: 66046761
Centisome position: 69.05
GC content: 60.74
Gene sequence:
>1452_bases ATGACAGATCAACGCCCGGCCGGGTACAGCCCGCGCCTGCACAACCACGATCTGGGGCCGGTGCCGCAGAAGTGGACCTG GTACAACATTCTGGCGTTCTGGATGAGCGATGTGCACAGCGTCGGCGGCTACGTTTTTGCCGCCAGTCTGTTCGCCCTGG GCCTGGCCAGTTGGCAGGTGCTGATCGCCCTGCTGGTGGGGATCTGCATCATTCAGGTGATTGCCAACCTGGTCGCCAAA CCCAGTCAGCAAGCCGCCGTGCCCTACCCGGTCATTTGCCGCCTGGCTTTCGGCGTGTTCGGTGCCAACATTCCCGCCAT CATTCGCGGGCTGATCGCAGTGGCGTGGTACGGCATTCAAACCTACCTGGCGTCCAGCGCACTGGTGATCGTGGTGCTGC GTTTCTTCCCGGAACTGGCCGTCTATCAAAGCGTGACATTTCTCGGACTGTCCTGGCTCGGCTGGTTCGGCTTTCTGGCG TTGTGGGTGGTGCAAGCCGCGGTGTTCTGGACGGGTATGGAGTCGATCAGGCGCTTCATCGACTGGGCCGGCCCTGCCGT TTATGCGGTGATGTTCGCTCTGGCAGGCTGGATTGTCTGGCGCGCCGGCTGGGACAACATCAGTTTTACTCTGGCTGAAA AGGAGTTGTCCGGCTGGGCAGCGTTCGGCCAGGTGGTCATGGCCATTGCGCTGGTGGTCTCGTATTTCTCCGGGCCGACG CTGAACTTCGGTGATTTCAGCCGCTATTGCCGCAGCATGGCCGACGTGCGCCGCGGCAATTTCTGGGGCTTACCGGTGAA TTTTCTGGCGTTTTCACTGGTAACAGTGGTGATCGTCTCGGGCACGTTGCCGATTTTCGGTGAGATGATCCACGACCCGA TTGCGACCGTCGCGCGCATCGACAACACCACGGCCGTGCTGCTCGGCGCCTTCACCTTCGTCACCGCCACGGTCGGCATC AATATCGTCGCCAACTTCGTTTCCCCCGCCTTCGACTTCGCCAACGTGGCGCCCAGCCGCATCAGCTGGCGGGCAGGCGG CATGATCGCAGCGGTAGCGTCGATCTTCATTACGCCCTGGAACCTGTTCAACAACCCTGAAGTGATTCACTACACCCTCG ACGTGCTGGCGGCCTGTATCGGCCCACTGTTCGGCATCCTGCTGGTGGATTACTACCTGATCAAGAAGCAGCAGATCGAT GTGGATGCCCTGTTCGATGACACGCCAAGCGGTCGCTACTGGTACACCAACGGCGTGAACTGGATCGCGGTCAAGGCATT GCTGCTGACGGCACTGGTCGGTCTGTGCTTCACCTTTGTCGAGTGGTTCAAGCCGATTGCCAACTTCGCCTGGTTTACCG GCTGCATCCTGGGCGGCGCAGTGTTTTACGCGTTGACCCGCTGGTCGCCCGTACAGGCTGCTAACCTTCCTGCGCCTGTC GGCCAGCATTGA
Upstream 100 bases:
>100_bases ACGAGAAATCGTATGGCACATGTTTTGCGTACACGATCGTATACAAAAAAATCATCGATCGTACTCCGATCCCGTCACGA CACACCGAGGGAGTCACGCA
Downstream 100 bases:
>100_bases GACGTCGCAAGACGCCAATACCTGAATGAAACCAGCGCTTTCAGAGGATTCGCCAAGCCCGGCATGACCTGAAAGCGCCG CCCTGCCTGCTCCGCTGAAA
Product: permease for cytosine/purines, uracil, thiamine, allantoin
Products: NA
Alternate protein names: Allantoin transport protein [H]
Number of amino acids: Translated: 483; Mature: 482
Protein sequence:
>483_residues MTDQRPAGYSPRLHNHDLGPVPQKWTWYNILAFWMSDVHSVGGYVFAASLFALGLASWQVLIALLVGICIIQVIANLVAK PSQQAAVPYPVICRLAFGVFGANIPAIIRGLIAVAWYGIQTYLASSALVIVVLRFFPELAVYQSVTFLGLSWLGWFGFLA LWVVQAAVFWTGMESIRRFIDWAGPAVYAVMFALAGWIVWRAGWDNISFTLAEKELSGWAAFGQVVMAIALVVSYFSGPT LNFGDFSRYCRSMADVRRGNFWGLPVNFLAFSLVTVVIVSGTLPIFGEMIHDPIATVARIDNTTAVLLGAFTFVTATVGI NIVANFVSPAFDFANVAPSRISWRAGGMIAAVASIFITPWNLFNNPEVIHYTLDVLAACIGPLFGILLVDYYLIKKQQID VDALFDDTPSGRYWYTNGVNWIAVKALLLTALVGLCFTFVEWFKPIANFAWFTGCILGGAVFYALTRWSPVQAANLPAPV GQH
Sequences:
>Translated_483_residues MTDQRPAGYSPRLHNHDLGPVPQKWTWYNILAFWMSDVHSVGGYVFAASLFALGLASWQVLIALLVGICIIQVIANLVAK PSQQAAVPYPVICRLAFGVFGANIPAIIRGLIAVAWYGIQTYLASSALVIVVLRFFPELAVYQSVTFLGLSWLGWFGFLA LWVVQAAVFWTGMESIRRFIDWAGPAVYAVMFALAGWIVWRAGWDNISFTLAEKELSGWAAFGQVVMAIALVVSYFSGPT LNFGDFSRYCRSMADVRRGNFWGLPVNFLAFSLVTVVIVSGTLPIFGEMIHDPIATVARIDNTTAVLLGAFTFVTATVGI NIVANFVSPAFDFANVAPSRISWRAGGMIAAVASIFITPWNLFNNPEVIHYTLDVLAACIGPLFGILLVDYYLIKKQQID VDALFDDTPSGRYWYTNGVNWIAVKALLLTALVGLCFTFVEWFKPIANFAWFTGCILGGAVFYALTRWSPVQAANLPAPV GQH >Mature_482_residues TDQRPAGYSPRLHNHDLGPVPQKWTWYNILAFWMSDVHSVGGYVFAASLFALGLASWQVLIALLVGICIIQVIANLVAKP SQQAAVPYPVICRLAFGVFGANIPAIIRGLIAVAWYGIQTYLASSALVIVVLRFFPELAVYQSVTFLGLSWLGWFGFLAL WVVQAAVFWTGMESIRRFIDWAGPAVYAVMFALAGWIVWRAGWDNISFTLAEKELSGWAAFGQVVMAIALVVSYFSGPTL NFGDFSRYCRSMADVRRGNFWGLPVNFLAFSLVTVVIVSGTLPIFGEMIHDPIATVARIDNTTAVLLGAFTFVTATVGIN IVANFVSPAFDFANVAPSRISWRAGGMIAAVASIFITPWNLFNNPEVIHYTLDVLAACIGPLFGILLVDYYLIKKQQIDV DALFDDTPSGRYWYTNGVNWIAVKALLLTALVGLCFTFVEWFKPIANFAWFTGCILGGAVFYALTRWSPVQAANLPAPVG QH
Specific function: Transport of allantoin [H]
COG id: COG1953
COG function: function code FH; Cytosine/uracil/thiamine/allantoin permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine-cytosine permease family [H]
Homologues:
Organism=Escherichia coli, GI87081749, Length=490, Percent_Identity=26.1224489795918, Blast_Score=203, Evalue=2e-53, Organism=Saccharomyces cerevisiae, GI6319495, Length=436, Percent_Identity=23.8532110091743, Blast_Score=130, Evalue=3e-31, Organism=Saccharomyces cerevisiae, GI6319429, Length=446, Percent_Identity=24.4394618834081, Blast_Score=128, Evalue=2e-30, Organism=Saccharomyces cerevisiae, GI6322219, Length=436, Percent_Identity=22.4770642201835, Blast_Score=119, Evalue=1e-27, Organism=Saccharomyces cerevisiae, GI6324766, Length=427, Percent_Identity=20.8430913348946, Blast_Score=91, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6323266, Length=442, Percent_Identity=22.3981900452489, Blast_Score=89, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6324645, Length=433, Percent_Identity=21.4780600461894, Blast_Score=85, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001248 - InterPro: IPR012681 [H]
Pfam domain/function: PF02133 Transp_cyt_pur [H]
EC number: NA
Molecular weight: Translated: 53032; Mature: 52901
Theoretical pI: Translated: 7.82; Mature: 7.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDQRPAGYSPRLHNHDLGPVPQKWTWYNILAFWMSDVHSVGGYVFAASLFALGLASWQV CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIALLVGICIIQVIANLVAKPSQQAAVPYPVICRLAFGVFGANIPAIIRGLIAVAWYGIQ HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH TYLASSALVIVVLRFFPELAVYQSVTFLGLSWLGWFGFLALWVVQAAVFWTGMESIRRFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DWAGPAVYAVMFALAGWIVWRAGWDNISFTLAEKELSGWAAFGQVVMAIALVVSYFSGPT HHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCC LNFGDFSRYCRSMADVRRGNFWGLPVNFLAFSLVTVVIVSGTLPIFGEMIHDPIATVARI CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC DNTTAVLLGAFTFVTATVGINIVANFVSPAFDFANVAPSRISWRAGGMIAAVASIFITPW CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCH NLFNNPEVIHYTLDVLAACIGPLFGILLVDYYLIKKQQIDVDALFDDTPSGRYWYTNGVN HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCEEEECCCH WIAVKALLLTALVGLCFTFVEWFKPIANFAWFTGCILGGAVFYALTRWSPVQAANLPAPV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC GQH CCC >Mature Secondary Structure TDQRPAGYSPRLHNHDLGPVPQKWTWYNILAFWMSDVHSVGGYVFAASLFALGLASWQV CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIALLVGICIIQVIANLVAKPSQQAAVPYPVICRLAFGVFGANIPAIIRGLIAVAWYGIQ HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH TYLASSALVIVVLRFFPELAVYQSVTFLGLSWLGWFGFLALWVVQAAVFWTGMESIRRFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DWAGPAVYAVMFALAGWIVWRAGWDNISFTLAEKELSGWAAFGQVVMAIALVVSYFSGPT HHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCC LNFGDFSRYCRSMADVRRGNFWGLPVNFLAFSLVTVVIVSGTLPIFGEMIHDPIATVARI CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC DNTTAVLLGAFTFVTATVGINIVANFVSPAFDFANVAPSRISWRAGGMIAAVASIFITPW CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCH NLFNNPEVIHYTLDVLAACIGPLFGILLVDYYLIKKQQIDVDALFDDTPSGRYWYTNGVN HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCEEEECCCH WIAVKALLLTALVGLCFTFVEWFKPIANFAWFTGCILGGAVFYALTRWSPVQAANLPAPV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC GQH CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377; 11344136 [H]