| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is zraS [C]
Identifier: 66046761
GI number: 66046761
Start: 4209228
End: 4211303
Strand: Direct
Name: zraS [C]
Synonym: Psyr_3532
Alternate gene names: 66046761
Gene position: 4209228-4211303 (Clockwise)
Preceding gene: 66046760
Following gene: 66046762
Centisome position: 69.08
GC content: 61.08
Gene sequence:
>2076_bases ATGAGCAATGATGTTTTTGGCGGCAGGCCATTCGCCCCCCAGCCACCCGTTCCCTCGGCGCAGGAAGCAGCCGAGCGGCT GCAACTTGCCTTGGAGTCAGGGGCGGTTGTCGGTACCTGGGTGTGGGACATCATTGCCGATCAGTTGACCGGCGATGAGC GTTTTGCCCGGACCTTCGGCTTGTGCCCGAAGCTGTGCGCCAAAGGTTTGCCACTGGAACTGGTGATTGCCTCCATTCAT CCTGACGATTCGGCCAGAGTCGACAAGTCAATCGAGGAAGCGCTGCAGAGTAGCGAAACCTATCGATGCGAATACCGGGT TCTCCATGAAGACGGTATTTATCGCTGGATCGAAGCCAGCGGAAGAATCGAACGCGACAGTCGTGGCAAACCCATTCGCA GTCCGGGTGTATTGCTTGATATAGACGGCCGTCGCACTGCCGAAGACGAGCGCGACCGCCTCAACGAGTTGCTGAGAATA TTCACAGCTGCCGTTCCCGGCGTTGTCTACGCCAAGGATCTCGAAGGTCGAATGCTGGTCGCCAATCGTGGCACCGCTGA CCTGATCGGCAAGCCGCCCGAGTTTTTCATTGGCAAGACGGACCTGGAATTTCTGGATGATCAGGAACAGGCGCGGACGC TCATGGAAACCGACCGCCGGATCATGCAGAGCAATGTCAGCGAACAGATTGAAGAACAGGTCAACCTGGCTGACGGCTCT GCAGCGATATGGCTCTCGACCAAAGCGCCGCTGCTCGATGCCAGCGGCGACGTGATCGGTCTGATCGGCTCCTCTATCGA TGTAACCGCCAGAAAAAAAGCCGAAGAAGCGGTCAGAGAACTCAACCAGACACTCGAACAGCGCATCGAACAAGCGGTTT TCGAACGCGAGCAGATCGAAGACGCCCTGCGTCACTCGCAGAAGATGGATGCCGTCGGACAACTGACGGGGGGCATCGCC CATGATTTCAACAACTTGCTGGCCGGCATTTCCGGCAGCCTGGAACTGATCACCAAACGCCTGGCCCAGGGCCGCGTCGG TGACGTCGACCGTTACGTGTCGGTCGCCCAGGGCGCAGTACGCCGCGCCGCATCGCTGACCCACCGCCTGCTGGCGTTCT CAAGACGCCAGACACTGTCGCCAAGAGTCACCGACGTGAACGGGTTGATTCATGACATGGAAGAGTTGATCGCGCGCACG GTCGGCCCGGAGATAGACATCAAGGTCGTCGCCCATGATGACCTGTGGCCCGCGCTGATCGATCATGCCCAGCTGGAAAG CTCGCTGCTTAACCTGTGCCTGAACGCCCGTGACGCAATGCCCAACGGCGGGCGCATTATCATCGAGACCGCCAATGCGT CCCTCGAAGAGTGCACCGACCCGGATCACGGCATTCCTGCCGGCGAGCACCTGAGCATCCGCGTGACCGACACGGGCATC GGCATGAGTCCGGACATCGCCGCCAAAGCCTTTGAACCGTTCTTCACCACCAAGGCCATCGGTGCCGGCACCGGTCTCGG GCTGTCGATGGTGTATGGCTTTGTGCGCCAGTCCGGCGGGCAGATTCGCGTCGAGTCGGTCGAAGGCCAGGGCACCAGCG TAGTCATGCACCTGCCCCGCCACACCGCTGAAAGCGCTCCGCGCCCCGTTGCGCCGGAAGTCATCGAAGAGCCGCCGCAT CACACCGGCGAAACCGTTCTGGTCGTAGACGACGAACCCTCGGTGAGGATGCTCGTCGCCGAAGTCATCAGCGGTCTGGG CTACAACTGCCTGGAAGCGGCAGACGCACAATCGGGCTTGCAGATCCTGCAGTCGGACACACGCATCGACCTGCTGATCA GTGACATAGGCTTGCCAGGCGGCATGAACGGCCGGGAAATGGCCGATGCGGCCGGTGACTGTCGACCAGGCTTGCCGACC CTGTTCATCACCGGTTACGCCAAGACATCCGTGCTGGACGATTGCCACCTGCGGCCTTGCACGCAAGTGCTGACCAAGCC GTTCGGGCTGGACGCGCTGGCCGGGCGGGTGACAGGTCTGATCGGCGCTGACGCGGTCGCCCGCGGGTATTCGTGA
Upstream 100 bases:
>100_bases CTGAAGCACAAAATAGAATAAATTTTGTACAACTTTCAGGCCGCTGCGCTGCCCTATGACTGAGTCTTTGTGAACCAGGC GTTCAAGTGGGTCGATAGTG
Downstream 100 bases:
>100_bases GGTGAACCCGACCACGCCTGATGGTCGGTATTTCGTGGTCAAGGGGCAACTCTGGCGGTGCTCCAATCCCTCCTTGAGCG ACGACGTCCGCCAGCACCTT
Product: PAS
Products: NA
Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]
Number of amino acids: Translated: 691; Mature: 690
Protein sequence:
>691_residues MSNDVFGGRPFAPQPPVPSAQEAAERLQLALESGAVVGTWVWDIIADQLTGDERFARTFGLCPKLCAKGLPLELVIASIH PDDSARVDKSIEEALQSSETYRCEYRVLHEDGIYRWIEASGRIERDSRGKPIRSPGVLLDIDGRRTAEDERDRLNELLRI FTAAVPGVVYAKDLEGRMLVANRGTADLIGKPPEFFIGKTDLEFLDDQEQARTLMETDRRIMQSNVSEQIEEQVNLADGS AAIWLSTKAPLLDASGDVIGLIGSSIDVTARKKAEEAVRELNQTLEQRIEQAVFEREQIEDALRHSQKMDAVGQLTGGIA HDFNNLLAGISGSLELITKRLAQGRVGDVDRYVSVAQGAVRRAASLTHRLLAFSRRQTLSPRVTDVNGLIHDMEELIART VGPEIDIKVVAHDDLWPALIDHAQLESSLLNLCLNARDAMPNGGRIIIETANASLEECTDPDHGIPAGEHLSIRVTDTGI GMSPDIAAKAFEPFFTTKAIGAGTGLGLSMVYGFVRQSGGQIRVESVEGQGTSVVMHLPRHTAESAPRPVAPEVIEEPPH HTGETVLVVDDEPSVRMLVAEVISGLGYNCLEAADAQSGLQILQSDTRIDLLISDIGLPGGMNGREMADAAGDCRPGLPT LFITGYAKTSVLDDCHLRPCTQVLTKPFGLDALAGRVTGLIGADAVARGYS
Sequences:
>Translated_691_residues MSNDVFGGRPFAPQPPVPSAQEAAERLQLALESGAVVGTWVWDIIADQLTGDERFARTFGLCPKLCAKGLPLELVIASIH PDDSARVDKSIEEALQSSETYRCEYRVLHEDGIYRWIEASGRIERDSRGKPIRSPGVLLDIDGRRTAEDERDRLNELLRI FTAAVPGVVYAKDLEGRMLVANRGTADLIGKPPEFFIGKTDLEFLDDQEQARTLMETDRRIMQSNVSEQIEEQVNLADGS AAIWLSTKAPLLDASGDVIGLIGSSIDVTARKKAEEAVRELNQTLEQRIEQAVFEREQIEDALRHSQKMDAVGQLTGGIA HDFNNLLAGISGSLELITKRLAQGRVGDVDRYVSVAQGAVRRAASLTHRLLAFSRRQTLSPRVTDVNGLIHDMEELIART VGPEIDIKVVAHDDLWPALIDHAQLESSLLNLCLNARDAMPNGGRIIIETANASLEECTDPDHGIPAGEHLSIRVTDTGI GMSPDIAAKAFEPFFTTKAIGAGTGLGLSMVYGFVRQSGGQIRVESVEGQGTSVVMHLPRHTAESAPRPVAPEVIEEPPH HTGETVLVVDDEPSVRMLVAEVISGLGYNCLEAADAQSGLQILQSDTRIDLLISDIGLPGGMNGREMADAAGDCRPGLPT LFITGYAKTSVLDDCHLRPCTQVLTKPFGLDALAGRVTGLIGADAVARGYS >Mature_690_residues SNDVFGGRPFAPQPPVPSAQEAAERLQLALESGAVVGTWVWDIIADQLTGDERFARTFGLCPKLCAKGLPLELVIASIHP DDSARVDKSIEEALQSSETYRCEYRVLHEDGIYRWIEASGRIERDSRGKPIRSPGVLLDIDGRRTAEDERDRLNELLRIF TAAVPGVVYAKDLEGRMLVANRGTADLIGKPPEFFIGKTDLEFLDDQEQARTLMETDRRIMQSNVSEQIEEQVNLADGSA AIWLSTKAPLLDASGDVIGLIGSSIDVTARKKAEEAVRELNQTLEQRIEQAVFEREQIEDALRHSQKMDAVGQLTGGIAH DFNNLLAGISGSLELITKRLAQGRVGDVDRYVSVAQGAVRRAASLTHRLLAFSRRQTLSPRVTDVNGLIHDMEELIARTV GPEIDIKVVAHDDLWPALIDHAQLESSLLNLCLNARDAMPNGGRIIIETANASLEECTDPDHGIPAGEHLSIRVTDTGIG MSPDIAAKAFEPFFTTKAIGAGTGLGLSMVYGFVRQSGGQIRVESVEGQGTSVVMHLPRHTAESAPRPVAPEVIEEPPHH TGETVLVVDDEPSVRMLVAEVISGLGYNCLEAADAQSGLQILQSDTRIDLLISDIGLPGGMNGREMADAAGDCRPGLPTL FITGYAKTSVLDDCHLRPCTQVLTKPFGLDALAGRVTGLIGADAVARGYS
Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=254, Percent_Identity=31.8897637795276, Blast_Score=112, Evalue=9e-26, Organism=Escherichia coli, GI1788549, Length=393, Percent_Identity=24.6819338422392, Blast_Score=94, Evalue=4e-20, Organism=Escherichia coli, GI48994928, Length=567, Percent_Identity=22.3985890652557, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1790300, Length=250, Percent_Identity=30.4, Blast_Score=75, Evalue=2e-14, Organism=Escherichia coli, GI145693157, Length=294, Percent_Identity=25.5102040816327, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1788713, Length=280, Percent_Identity=27.1428571428571, Blast_Score=69, Evalue=7e-13, Organism=Escherichia coli, GI87081816, Length=202, Percent_Identity=25.7425742574257, Blast_Score=66, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 74750; Mature: 74618
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNDVFGGRPFAPQPPVPSAQEAAERLQLALESGAVVGTWVWDIIADQLTGDERFARTFG CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCHHHHHHHHC LCPKLCAKGLPLELVIASIHPDDSARVDKSIEEALQSSETYRCEYRVLHEDGIYRWIEAS CCHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEECCC GRIERDSRGKPIRSPGVLLDIDGRRTAEDERDRLNELLRIFTAAVPGVVYAKDLEGRMLV CCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEE ANRGTADLIGKPPEFFIGKTDLEFLDDQEQARTLMETDRRIMQSNVSEQIEEQVNLADGS ECCCCHHHCCCCCHHEECCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC AAIWLSTKAPLLDASGDVIGLIGSSIDVTARKKAEEAVRELNQTLEQRIEQAVFEREQIE EEEEEECCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DALRHSQKMDAVGQLTGGIAHDFNNLLAGISGSLELITKRLAQGRVGDVDRYVSVAQGAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHH RRAASLTHRLLAFSRRQTLSPRVTDVNGLIHDMEELIARTVGPEIDIKVVAHDDLWPALI HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHH DHAQLESSLLNLCLNARDAMPNGGRIIIETANASLEECTDPDHGIPAGEHLSIRVTDTGI HHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHCCCCCCCCCCCCEEEEEEEECCC GMSPDIAAKAFEPFFTTKAIGAGTGLGLSMVYGFVRQSGGQIRVESVEGQGTSVVMHLPR CCCCCHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEECCC HTAESAPRPVAPEVIEEPPHHTGETVLVVDDEPSVRMLVAEVISGLGYNCLEAADAQSGL HHHHCCCCCCCCHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCHHHHHHCHHHHH QILQSDTRIDLLISDIGLPGGMNGREMADAAGDCRPGLPTLFITGYAKTSVLDDCHLRPC HHHHCCCCEEEEEEECCCCCCCCCHHHHHHCCCCCCCCCEEEEECCHHHHHHCCCCCCHH TQVLTKPFGLDALAGRVTGLIGADAVARGYS HHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SNDVFGGRPFAPQPPVPSAQEAAERLQLALESGAVVGTWVWDIIADQLTGDERFARTFG CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCHHHHHHHHC LCPKLCAKGLPLELVIASIHPDDSARVDKSIEEALQSSETYRCEYRVLHEDGIYRWIEAS CCHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEECCC GRIERDSRGKPIRSPGVLLDIDGRRTAEDERDRLNELLRIFTAAVPGVVYAKDLEGRMLV CCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEE ANRGTADLIGKPPEFFIGKTDLEFLDDQEQARTLMETDRRIMQSNVSEQIEEQVNLADGS ECCCCHHHCCCCCHHEECCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC AAIWLSTKAPLLDASGDVIGLIGSSIDVTARKKAEEAVRELNQTLEQRIEQAVFEREQIE EEEEEECCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DALRHSQKMDAVGQLTGGIAHDFNNLLAGISGSLELITKRLAQGRVGDVDRYVSVAQGAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHH RRAASLTHRLLAFSRRQTLSPRVTDVNGLIHDMEELIARTVGPEIDIKVVAHDDLWPALI HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHH DHAQLESSLLNLCLNARDAMPNGGRIIIETANASLEECTDPDHGIPAGEHLSIRVTDTGI HHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHCCCCCCCCCCCCEEEEEEEECCC GMSPDIAAKAFEPFFTTKAIGAGTGLGLSMVYGFVRQSGGQIRVESVEGQGTSVVMHLPR CCCCCHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEECCC HTAESAPRPVAPEVIEEPPHHTGETVLVVDDEPSVRMLVAEVISGLGYNCLEAADAQSGL HHHHCCCCCCCCHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCHHHHHHCHHHHH QILQSDTRIDLLISDIGLPGGMNGREMADAAGDCRPGLPTLFITGYAKTSVLDDCHLRPC HHHHCCCCEEEEEEECCCCCCCCCHHHHHHCCCCCCCCCEEEEECCHHHHHHCCCCCCHH TQVLTKPFGLDALAGRVTGLIGADAVARGYS HHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA