| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is hipO [H]
Identifier: 66046752
GI number: 66046752
Start: 4199121
End: 4200278
Strand: Reverse
Name: hipO [H]
Synonym: Psyr_3523
Alternate gene names: 66046752
Gene position: 4200278-4199121 (Counterclockwise)
Preceding gene: 66046753
Following gene: 66046750
Centisome position: 68.93
GC content: 63.21
Gene sequence:
>1158_bases ATGTCCATTTCAAAGACGTTGATTGACGAAGCAACCGTGTGGCGCCGCACCCTCCATGCCGCGCCGGAACTGGGGTTTCA GGAGCTGAAAACCTCCGACAAGGTGGCTGAGTTGCTGAGCGGTTTCGGCATCGAGATTCACCGTGGGCTGGGCGGCACTG GCGTGGTTGGCACCCTGCGTAACGGCGACGGTCCGACCATCGGCCTGCGTGCCGACATGGATGCCTTGCCGATTCAGGAG CTGGGCGACAGCGTTCACAAGTCGACCCACAAGGGCTGCATGCACGCCTGCGGCCATGATGGCCACACCGCGATCCTGCT GGCCACCGCGAGGCATCTGGCCGAGACTCGGCGCTTTCGCGGCACGGTGCATTTCGTCTTCCAGCCTGCCGAAGAGAACC TCGGCGGCGCACAGCGAATGATCGAAGACGGACTGTTCGAACGCTTTCCGATGGAAGCCATCTACGGCCTGCACAACTGG CCGGGTGTGCCTGCGGGCAAGGTGGTGATCAATCCGGGGCCGATGATGGCGTCGCTCGACACCTTTGAAATCACCCTGAC CGGCAAAGGCAGCCATGCGGCCATGCCGGACAAGGGCAATGATCCGATCGTGGCCGCGGCCGAGCTGGTGCTGGGGCTGC AAACCATTGTCTCCCGGCGCCTGTCGCCGCTCGATTCGGCGGTGGTCAGCATCACTCAGTTCAATGCCGGCGAGGCGATC AACGTGATCCCGGAAACCGCCACGTTGCGTGGCACCGTGCGCTGCCTGCAAACCCCTGTGCGCGAAAAGGTTCAGCAACT GATCGGCGAGTTCGTCGAGCGTTTGCCGACGGCCTTCGGCGTGCGCGGCGAGCTGGTTTACAACGTCGGCTACCCGGTGA CCGAAAACCACGTCGAAGCGGCTGCCACGATCCGTCGTGCAGCAGTCGCCGCAGTCGGCGAGGCCAACGTGCAGTGGGGC TGCAACCCGTCGATGGCCTCTGAAGACTTCGCCTTCATGCTGCATGCATGTCCCGGTGCTTACATCTGGATGGGCGTCGA CGGCGAGAAGCCGTCAGCGGCGTTGCACAACCCTTACTACGACTTCAACGACCAGGTGATCGAACCCGGCGTTGCGGTCT GGACCTCGCTGGTGGAGCAGTGTTTGCCGGTGGCTTGA
Upstream 100 bases:
>100_bases GATGCCCTGCGCGAGTACAGTGAAGTGAAAAGCGTCTGGGTCGAAACCGCCGCCAAGCCAGCCGCCAGCTTTGGCTACGG CGCGAGTCTGGAGTAAGCAC
Downstream 100 bases:
>100_bases ATGGCTCTCGCGCTTACGGCTGCCTTTGATGCTGGCCGTAGGTCATAGGAGCGAAGCGGTTCGCGAAAAGGACGGTACCT CCGCAGGGGATGTACCGTCC
Product: peptidase M20D, amidohydrolase
Products: NA
Alternate protein names: Benzoylglycine amidohydrolase; Hippuricase [H]
Number of amino acids: Translated: 385; Mature: 384
Protein sequence:
>385_residues MSISKTLIDEATVWRRTLHAAPELGFQELKTSDKVAELLSGFGIEIHRGLGGTGVVGTLRNGDGPTIGLRADMDALPIQE LGDSVHKSTHKGCMHACGHDGHTAILLATARHLAETRRFRGTVHFVFQPAEENLGGAQRMIEDGLFERFPMEAIYGLHNW PGVPAGKVVINPGPMMASLDTFEITLTGKGSHAAMPDKGNDPIVAAAELVLGLQTIVSRRLSPLDSAVVSITQFNAGEAI NVIPETATLRGTVRCLQTPVREKVQQLIGEFVERLPTAFGVRGELVYNVGYPVTENHVEAAATIRRAAVAAVGEANVQWG CNPSMASEDFAFMLHACPGAYIWMGVDGEKPSAALHNPYYDFNDQVIEPGVAVWTSLVEQCLPVA
Sequences:
>Translated_385_residues MSISKTLIDEATVWRRTLHAAPELGFQELKTSDKVAELLSGFGIEIHRGLGGTGVVGTLRNGDGPTIGLRADMDALPIQE LGDSVHKSTHKGCMHACGHDGHTAILLATARHLAETRRFRGTVHFVFQPAEENLGGAQRMIEDGLFERFPMEAIYGLHNW PGVPAGKVVINPGPMMASLDTFEITLTGKGSHAAMPDKGNDPIVAAAELVLGLQTIVSRRLSPLDSAVVSITQFNAGEAI NVIPETATLRGTVRCLQTPVREKVQQLIGEFVERLPTAFGVRGELVYNVGYPVTENHVEAAATIRRAAVAAVGEANVQWG CNPSMASEDFAFMLHACPGAYIWMGVDGEKPSAALHNPYYDFNDQVIEPGVAVWTSLVEQCLPVA >Mature_384_residues SISKTLIDEATVWRRTLHAAPELGFQELKTSDKVAELLSGFGIEIHRGLGGTGVVGTLRNGDGPTIGLRADMDALPIQEL GDSVHKSTHKGCMHACGHDGHTAILLATARHLAETRRFRGTVHFVFQPAEENLGGAQRMIEDGLFERFPMEAIYGLHNWP GVPAGKVVINPGPMMASLDTFEITLTGKGSHAAMPDKGNDPIVAAAELVLGLQTIVSRRLSPLDSAVVSITQFNAGEAIN VIPETATLRGTVRCLQTPVREKVQQLIGEFVERLPTAFGVRGELVYNVGYPVTENHVEAAATIRRAAVAAVGEANVQWGC NPSMASEDFAFMLHACPGAYIWMGVDGEKPSAALHNPYYDFNDQVIEPGVAVWTSLVEQCLPVA
Specific function: Required But Not Essential For Aminobenzoyl-Glutamate Utilization. May Participate In Hydrolysis Of Aminobenzoyl- Glutamate To Aminobenzoate, Either Alone Or In Combination With Abgb. [C]
COG id: COG1473
COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M20 family [H]
Homologues:
Organism=Escherichia coli, GI87081880, Length=417, Percent_Identity=28.0575539568345, Blast_Score=111, Evalue=8e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017439 - InterPro: IPR010168 - InterPro: IPR002933 - InterPro: IPR011650 [H]
Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]
EC number: =3.5.1.32 [H]
Molecular weight: Translated: 41361; Mature: 41230
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSISKTLIDEATVWRRTLHAAPELGFQELKTSDKVAELLSGFGIEIHRGLGGTGVVGTLR CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEE NGDGPTIGLRADMDALPIQELGDSVHKSTHKGCMHACGHDGHTAILLATARHLAETRRFR CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHC GTVHFVFQPAEENLGGAQRMIEDGLFERFPMEAIYGLHNWPGVPAGKVVINPGPMMASLD CEEEEEEECCHHCCCHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCEEEECCCCCEEECC TFEITLTGKGSHAAMPDKGNDPIVAAAELVLGLQTIVSRRLSPLDSAVVSITQFNAGEAI EEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEECCCCCEE NVIPETATLRGTVRCLQTPVREKVQQLIGEFVERLPTAFGVRGELVYNVGYPVTENHVEA EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHH AATIRRAAVAAVGEANVQWGCNPSMASEDFAFMLHACPGAYIWMGVDGEKPSAALHNPYY HHHHHHHHHHHHCCCCCEECCCCCCCCCHHHHHEECCCCEEEEEECCCCCCCHHHCCCCC DFNDQVIEPGVAVWTSLVEQCLPVA CCCCCHHCCHHHHHHHHHHHHCCCC >Mature Secondary Structure SISKTLIDEATVWRRTLHAAPELGFQELKTSDKVAELLSGFGIEIHRGLGGTGVVGTLR CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEE NGDGPTIGLRADMDALPIQELGDSVHKSTHKGCMHACGHDGHTAILLATARHLAETRRFR CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHC GTVHFVFQPAEENLGGAQRMIEDGLFERFPMEAIYGLHNWPGVPAGKVVINPGPMMASLD CEEEEEEECCHHCCCHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCEEEECCCCCEEECC TFEITLTGKGSHAAMPDKGNDPIVAAAELVLGLQTIVSRRLSPLDSAVVSITQFNAGEAI EEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEECCCCCEE NVIPETATLRGTVRCLQTPVREKVQQLIGEFVERLPTAFGVRGELVYNVGYPVTENHVEA EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHH AATIRRAAVAAVGEANVQWGCNPSMASEDFAFMLHACPGAYIWMGVDGEKPSAALHNPYY HHHHHHHHHHHHCCCCCEECCCCCCCCCHHHHHEECCCCEEEEEECCCCCCCHHHCCCCC DFNDQVIEPGVAVWTSLVEQCLPVA CCCCCHHCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7730270; 10688204 [H]