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The map label for this gene is qseB [H]

Identifier: 66046740

GI number: 66046740

Start: 4185924

End: 4186586

Strand: Direct

Name: qseB [H]

Synonym: Psyr_3511

Alternate gene names: 66046740

Gene position: 4185924-4186586 (Clockwise)

Preceding gene: 66046732

Following gene: 66046741

Centisome position: 68.69

GC content: 63.65

Gene sequence:

>663_bases
ATGCGCCTGCTTCTCGTCGAGGATGATCGAGCCATTGGTCAGGGCATCCGCGTGGCCCTGAATACCGAGGGCTATACCCT
CGACTGGCTGGAGGACGGACTGAGCGCGCTGCACGCTTTGCGCAGCGAGCCATTCGACCTGTTGCTGCTCGACCTCGGCC
TGCCGCGCCTGGATGGCCTGGACCTGCTGCGCCAGTTGCGCGCCGAAGCACTCACCCTGCCGGTGCTGATCCTGACCGCG
CGCGACGGGACTGCCGACCGTATTGCCGGTCTGGATGCCGGTGCGGACGATTACCTGATCAAGCCATTCGACGTCGATGA
ACTGAAAGCCCGGGTCCGCGCCCTGCTCAGGCGCAGCCAGGGCCGTGCGCAACCGCTGCTGGAACATGCCGGCATCAGCC
TCGATCCGGCGTCGCAGCAGGTCAGTTTCCAGGGCAGCGAAGTACCGATGACGCCCATGGAGTACCAGTTGCTGCATCAA
CTGATGATCCGCCCCGGCAAGGTGGTCACCCGCGAGCGCTTGTCCAATACCCTGTACGGTTGGCAGGACAAGGTCGAAAG
CAACACGCTGGAGGTACTGATTCACAACCTGCGCAAGAAACTGTCCACCGAGCTGATCCGCACCGTGCGCGGCGTCGGTT
ACCTGCTGGAGCTCAAGGCATGA

Upstream 100 bases:

>100_bases
GTAACAGCTCGTAACATCTTCCCGGACACACGGCACTTCGCGCTGCTGTCTGCTGACGGCATCATGGCGCCCTTCTCCCC
ACACTCACCGGTCAAACCCT

Downstream 100 bases:

>100_bases
CCTCGGTACGCGCGCGCATTCTGGTCCCGGTGCTGATGCTGTTGCTGCTCGGCGACCTGACCATCAGCCTGCTCGCCCTG
CGCGACAGCCATCACGAAAT

Product: response regulator receiver:transcriptional regulatory protein, C-terminal

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MRLLLVEDDRAIGQGIRVALNTEGYTLDWLEDGLSALHALRSEPFDLLLLDLGLPRLDGLDLLRQLRAEALTLPVLILTA
RDGTADRIAGLDAGADDYLIKPFDVDELKARVRALLRRSQGRAQPLLEHAGISLDPASQQVSFQGSEVPMTPMEYQLLHQ
LMIRPGKVVTRERLSNTLYGWQDKVESNTLEVLIHNLRKKLSTELIRTVRGVGYLLELKA

Sequences:

>Translated_220_residues
MRLLLVEDDRAIGQGIRVALNTEGYTLDWLEDGLSALHALRSEPFDLLLLDLGLPRLDGLDLLRQLRAEALTLPVLILTA
RDGTADRIAGLDAGADDYLIKPFDVDELKARVRALLRRSQGRAQPLLEHAGISLDPASQQVSFQGSEVPMTPMEYQLLHQ
LMIRPGKVVTRERLSNTLYGWQDKVESNTLEVLIHNLRKKLSTELIRTVRGVGYLLELKA
>Mature_220_residues
MRLLLVEDDRAIGQGIRVALNTEGYTLDWLEDGLSALHALRSEPFDLLLLDLGLPRLDGLDLLRQLRAEALTLPVLILTA
RDGTADRIAGLDAGADDYLIKPFDVDELKARVRALLRRSQGRAQPLLEHAGISLDPASQQVSFQGSEVPMTPMEYQLLHQ
LMIRPGKVVTRERLSNTLYGWQDKVESNTLEVLIHNLRKKLSTELIRTVRGVGYLLELKA

Specific function: Member of a two-component regulatory system qseB/qseC. Activates the flagella regulon by activating transcription of flhDC [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789402, Length=216, Percent_Identity=45.8333333333333, Blast_Score=202, Evalue=1e-53,
Organism=Escherichia coli, GI1790552, Length=216, Percent_Identity=49.0740740740741, Blast_Score=201, Evalue=5e-53,
Organism=Escherichia coli, GI1787375, Length=223, Percent_Identity=38.1165919282511, Blast_Score=154, Evalue=5e-39,
Organism=Escherichia coli, GI1786599, Length=221, Percent_Identity=40.2714932126697, Blast_Score=146, Evalue=9e-37,
Organism=Escherichia coli, GI87082012, Length=218, Percent_Identity=38.0733944954128, Blast_Score=146, Evalue=1e-36,
Organism=Escherichia coli, GI1786784, Length=223, Percent_Identity=35.4260089686099, Blast_Score=144, Evalue=5e-36,
Organism=Escherichia coli, GI1786911, Length=222, Percent_Identity=39.1891891891892, Blast_Score=134, Evalue=4e-33,
Organism=Escherichia coli, GI1788394, Length=226, Percent_Identity=38.4955752212389, Blast_Score=132, Evalue=1e-32,
Organism=Escherichia coli, GI1790860, Length=221, Percent_Identity=37.5565610859729, Blast_Score=131, Evalue=4e-32,
Organism=Escherichia coli, GI2367329, Length=228, Percent_Identity=38.5964912280702, Blast_Score=120, Evalue=8e-29,
Organism=Escherichia coli, GI1787229, Length=222, Percent_Identity=34.6846846846847, Blast_Score=115, Evalue=2e-27,
Organism=Escherichia coli, GI1789809, Length=227, Percent_Identity=31.2775330396476, Blast_Score=110, Evalue=9e-26,
Organism=Escherichia coli, GI1790863, Length=226, Percent_Identity=30.5309734513274, Blast_Score=101, Evalue=3e-23,
Organism=Escherichia coli, GI1790299, Length=123, Percent_Identity=38.2113821138211, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI145693140, Length=231, Percent_Identity=28.1385281385281, Blast_Score=77, Evalue=9e-16,
Organism=Escherichia coli, GI1788550, Length=108, Percent_Identity=32.4074074074074, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1790437, Length=119, Percent_Identity=33.6134453781513, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1788713, Length=92, Percent_Identity=38.0434782608696, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1788191, Length=121, Percent_Identity=30.5785123966942, Blast_Score=67, Evalue=9e-13,
Organism=Escherichia coli, GI1788521, Length=208, Percent_Identity=27.8846153846154, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1788905, Length=117, Percent_Identity=33.3333333333333, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI1787487, Length=119, Percent_Identity=32.7731092436975, Blast_Score=61, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6322000, Length=110, Percent_Identity=34.5454545454545, Blast_Score=63, Evalue=4e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 24622; Mature: 24622

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLLVEDDRAIGQGIRVALNTEGYTLDWLEDGLSALHALRSEPFDLLLLDLGLPRLDGL
CEEEEECCCCHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHH
DLLRQLRAEALTLPVLILTARDGTADRIAGLDAGADDYLIKPFDVDELKARVRALLRRSQ
HHHHHHHHHHHHEEEEEEEECCCCHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHHC
GRAQPLLEHAGISLDPASQQVSFQGSEVPMTPMEYQLLHQLMIRPGKVVTRERLSNTLYG
CCCHHHHHHCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCC
WQDKVESNTLEVLIHNLRKKLSTELIRTVRGVGYLLELKA
CHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECC
>Mature Secondary Structure
MRLLLVEDDRAIGQGIRVALNTEGYTLDWLEDGLSALHALRSEPFDLLLLDLGLPRLDGL
CEEEEECCCCHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHH
DLLRQLRAEALTLPVLILTARDGTADRIAGLDAGADDYLIKPFDVDELKARVRALLRRSQ
HHHHHHHHHHHHEEEEEEEECCCCHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHHC
GRAQPLLEHAGISLDPASQQVSFQGSEVPMTPMEYQLLHQLMIRPGKVVTRERLSNTLYG
CCCHHHHHHCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCC
WQDKVESNTLEVLIHNLRKKLSTELIRTVRGVGYLLELKA
CHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]