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The map label for this gene is ygiM [H]

Identifier: 66046726

GI number: 66046726

Start: 4167018

End: 4167848

Strand: Reverse

Name: ygiM [H]

Synonym: Psyr_3497

Alternate gene names: 66046726

Gene position: 4167848-4167018 (Counterclockwise)

Preceding gene: 66046728

Following gene: 66046725

Centisome position: 68.4

GC content: 60.17

Gene sequence:

>831_bases
ATGAAAGGGATCATCAGGTGCTTTTTCAACGCGCCTGATAGGCAGACATTCCGTCCGGGCAGGAGTTGCAAAACCGTTGA
TCACTTGCCGCTCCCATCCTTAGCCGGCCCGTTAAACGAGGCTTTATTTTCATTTCAGATAAAGATAATTATCGCCATGT
CTCGTCATTTTTCCGCACTTCTTTCCCGAGCCCCTGGCCTGTTCGCCGTTTCGCGTCGCTTGCTCGGCGCAGGCTTGGTT
GGCGCTGCATTGACCGTTGTCATGCCTGGCAGCGCACAGGCCGCCGGCAGCGATCGCTGGGTCAGCGACAGCCTCACTAC
CTACGTACGCAGCGGACCAACCGATGATCATCGGATTGTGGGGACGCTGAAATCCGGGCAGAAGGTCGAGCTGCTCAGCG
CTTCGGGCAAGTTCAGCCAGGTGCGTGGCGAAGGCGGTTCCACCGTGTGGATCCCCAGCAGCGACTTGCAGGAAGTTCCT
GGCCAGGCCGAGCGTGTGCCGCAGCTGACTCAGCAGGTTGCCGACCTGACCGAGCAGCTGGCGGGCATCGACAACACCTG
GAAGACCCGCGTGCAAGGCATGCAGGAAACGCTGGACGCGCGCAAGAAGCTGGTCGACGAACTGGAGGCGCGCACCAAGA
CCCTCAACGATCAACTGGCCGACTCTCAGGCTGAGTTGCGTGCGACTCAGGCGCGACTTGGCGACGAGAACAAGCAGGTG
ATGATGCGTTACATGGTCTACGGCGGCAGCATTGCCGGTGCTGGCTTGCTGGTCGGCCTGATCCTTCCGGCGCTGACCAA
GGGCCGCAAGAAGAACGACGGCTGGGTGTAA

Upstream 100 bases:

>100_bases
GCATGACCGTGCGGCTGAATTTTGACGCGGACAACGGGCAATAGTGAACCTGACCCCTTTAACGGAGTCTGTTAGCTGAT
GGACTTTCTGGACGGCCTGC

Downstream 100 bases:

>100_bases
ACTACCTGTGCAACCTCGCATGCCAGCGCGCCGCGCTGGCATGCCGTTCCGCCACGCTGTGCGTTGTATCGAATGCACAG
CCGATGTGTGACAAACCTCT

Product: SH3-like region

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MKGIIRCFFNAPDRQTFRPGRSCKTVDHLPLPSLAGPLNEALFSFQIKIIIAMSRHFSALLSRAPGLFAVSRRLLGAGLV
GAALTVVMPGSAQAAGSDRWVSDSLTTYVRSGPTDDHRIVGTLKSGQKVELLSASGKFSQVRGEGGSTVWIPSSDLQEVP
GQAERVPQLTQQVADLTEQLAGIDNTWKTRVQGMQETLDARKKLVDELEARTKTLNDQLADSQAELRATQARLGDENKQV
MMRYMVYGGSIAGAGLLVGLILPALTKGRKKNDGWV

Sequences:

>Translated_276_residues
MKGIIRCFFNAPDRQTFRPGRSCKTVDHLPLPSLAGPLNEALFSFQIKIIIAMSRHFSALLSRAPGLFAVSRRLLGAGLV
GAALTVVMPGSAQAAGSDRWVSDSLTTYVRSGPTDDHRIVGTLKSGQKVELLSASGKFSQVRGEGGSTVWIPSSDLQEVP
GQAERVPQLTQQVADLTEQLAGIDNTWKTRVQGMQETLDARKKLVDELEARTKTLNDQLADSQAELRATQARLGDENKQV
MMRYMVYGGSIAGAGLLVGLILPALTKGRKKNDGWV
>Mature_276_residues
MKGIIRCFFNAPDRQTFRPGRSCKTVDHLPLPSLAGPLNEALFSFQIKIIIAMSRHFSALLSRAPGLFAVSRRLLGAGLV
GAALTVVMPGSAQAAGSDRWVSDSLTTYVRSGPTDDHRIVGTLKSGQKVELLSASGKFSQVRGEGGSTVWIPSSDLQEVP
GQAERVPQLTQQVADLTEQLAGIDNTWKTRVQGMQETLDARKKLVDELEARTKTLNDQLADSQAELRATQARLGDENKQV
MMRYMVYGGSIAGAGLLVGLILPALTKGRKKNDGWV

Specific function: Unknown

COG id: COG3103

COG function: function code T; SH3 domain protein

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1605 [H]

Homologues:

Organism=Escherichia coli, GI1789435, Length=206, Percent_Identity=37.8640776699029, Blast_Score=125, Evalue=4e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003646
- InterPro:   IPR013247
- InterPro:   IPR016476 [H]

Pfam domain/function: PF08239 SH3_3 [H]

EC number: NA

Molecular weight: Translated: 29844; Mature: 29844

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGIIRCFFNAPDRQTFRPGRSCKTVDHLPLPSLAGPLNEALFSFQIKIIIAMSRHFSAL
CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHH
LSRAPGLFAVSRRLLGAGLVGAALTVVMPGSAQAAGSDRWVSDSLTTYVRSGPTDDHRIV
HHCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEE
GTLKSGQKVELLSASGKFSQVRGEGGSTVWIPSSDLQEVPGQAERVPQLTQQVADLTEQL
EECCCCCEEEEEECCCCHHHHCCCCCCEEEECCCHHHHCCCHHHHHHHHHHHHHHHHHHH
AGIDNTWKTRVQGMQETLDARKKLVDELEARTKTLNDQLADSQAELRATQARLGDENKQV
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHH
MMRYMVYGGSIAGAGLLVGLILPALTKGRKKNDGWV
HHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKGIIRCFFNAPDRQTFRPGRSCKTVDHLPLPSLAGPLNEALFSFQIKIIIAMSRHFSAL
CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHH
LSRAPGLFAVSRRLLGAGLVGAALTVVMPGSAQAAGSDRWVSDSLTTYVRSGPTDDHRIV
HHCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEE
GTLKSGQKVELLSASGKFSQVRGEGGSTVWIPSSDLQEVPGQAERVPQLTQQVADLTEQL
EECCCCCEEEEEECCCCHHHHCCCCCCEEEECCCHHHHCCCHHHHHHHHHHHHHHHHHHH
AGIDNTWKTRVQGMQETLDARKKLVDELEARTKTLNDQLADSQAELRATQARLGDENKQV
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHH
MMRYMVYGGSIAGAGLLVGLILPALTKGRKKNDGWV
HHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]