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The map label for this gene is rlmM [H]

Identifier: 66046632

GI number: 66046632

Start: 4061045

End: 4062118

Strand: Reverse

Name: rlmM [H]

Synonym: Psyr_3403

Alternate gene names: 66046632

Gene position: 4062118-4061045 (Counterclockwise)

Preceding gene: 66046637

Following gene: 66046626

Centisome position: 66.66

GC content: 62.57

Gene sequence:

>1074_bases
ATGAATACACTGTTTATGCACTGCCGACCCGGTTTTGAGGGCGAAGTCTGCTCGGAAATAGCCGATCACGCCGCGCGCCT
GGACGTGGCCGGGTATGCCAAGGCCCGTCCCGACACGGCTTGCGCCGAATTCATCTGCACCGAGGCGGATGGCGCCGAAC
GGTTGATGAACGGTCAGCGCTTCGACAAGCTGATATTTCCCCGGCAGTGGGCGCGGGGGCTGTTTCTCGAGTTGCCGGAA
ACCGATCGCATCAGCGTGATTCTCGCGCAGCTGGCGGCGTTCCCGATTTGCGGCAGTCTGTGGCTGGAGGTCGTGGATAC
CAACGACGGCAAGGAGCTGTCGAATTTCTGCAAGAAGTTCGAGGCGCCGCTGCGCAAGGCCCTGACTCAGGCAGGCAAAC
TGGTGGATGATCCGCGCAAGCCGCGTCTGCTGCTGACCTTCAAGAGTGGTCGCGAGGTGTTTCTCGGTCTGGCCGATGCG
GACAACTCCGCCATGTGGCCGATGGGCATCCCGCGCCTCAAGTTTCCCCGCGAAGCGCCAAGCCGCTCGACCCTGAAGCT
TGAAGAGGCCTGGCACCACTTCATTCCCAGAGACCAGTGGGACGAGCGCCTTTCCGGCGACATGACCAGCGTGGACCTGG
GTGCCGCGCCGGGCGGCTGGACGTATCAACTGGTGCGCCGCGGCATGCTGGTGACCGCCATCGATAACGGGCCGATGGCG
GAAAGCCTGATGGACACCGGGCTGGTGCAGCATCTGATGGCGGACGGTTTTACCTACAAGCCTCGACAGCCTGTGGACTG
GATGGTCTGCGACATCGTCGAAAAGCCTGCGCGTAATGCAGCCCTGCTGGAAACCTGGCTGGGTGAAGGCCTGTGCCGCG
AAGCGGTGGTCAACCTCAAGTTGCCTATGAAACAGCGCTACGCTGAAGTGCGCCGACTGCTCGACCGTATCGAAGAGGGC
TTTCAGGCGCGAGGGGTGCGGGTGTCCATCGGCTGCAAACAGCTCTACCACGACCGCGAAGAAGTCACCTGCCACCTGCG
CAGGCTGGACGTGGCCAAAGCGGCGAGGAAGTGA

Upstream 100 bases:

>100_bases
GGACTGTTCGGCCGCACCAGTGGTTCCTGGATTGGGCTATCATGCGCGGCTTTCAAGTCTGCGGGGTTACGCCCGAGTGC
CCACTGCCCAGGAGTAACCC

Downstream 100 bases:

>100_bases
TTCCTTACTCTCGTTTCGCACGCTCCAGTGACTATCGTGCCAATGCTCCGTGCAGGCATGGAGTTCTTGGTGCTCCGCGT
CACAAATCGTCGATGCGAAA

Product: putative RNA 2'-O-ribose methyltransferase

Products: NA

Alternate protein names: 23S rRNA 2'-O-ribose methyltransferase rlmM [H]

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MNTLFMHCRPGFEGEVCSEIADHAARLDVAGYAKARPDTACAEFICTEADGAERLMNGQRFDKLIFPRQWARGLFLELPE
TDRISVILAQLAAFPICGSLWLEVVDTNDGKELSNFCKKFEAPLRKALTQAGKLVDDPRKPRLLLTFKSGREVFLGLADA
DNSAMWPMGIPRLKFPREAPSRSTLKLEEAWHHFIPRDQWDERLSGDMTSVDLGAAPGGWTYQLVRRGMLVTAIDNGPMA
ESLMDTGLVQHLMADGFTYKPRQPVDWMVCDIVEKPARNAALLETWLGEGLCREAVVNLKLPMKQRYAEVRRLLDRIEEG
FQARGVRVSIGCKQLYHDREEVTCHLRRLDVAKAARK

Sequences:

>Translated_357_residues
MNTLFMHCRPGFEGEVCSEIADHAARLDVAGYAKARPDTACAEFICTEADGAERLMNGQRFDKLIFPRQWARGLFLELPE
TDRISVILAQLAAFPICGSLWLEVVDTNDGKELSNFCKKFEAPLRKALTQAGKLVDDPRKPRLLLTFKSGREVFLGLADA
DNSAMWPMGIPRLKFPREAPSRSTLKLEEAWHHFIPRDQWDERLSGDMTSVDLGAAPGGWTYQLVRRGMLVTAIDNGPMA
ESLMDTGLVQHLMADGFTYKPRQPVDWMVCDIVEKPARNAALLETWLGEGLCREAVVNLKLPMKQRYAEVRRLLDRIEEG
FQARGVRVSIGCKQLYHDREEVTCHLRRLDVAKAARK
>Mature_357_residues
MNTLFMHCRPGFEGEVCSEIADHAARLDVAGYAKARPDTACAEFICTEADGAERLMNGQRFDKLIFPRQWARGLFLELPE
TDRISVILAQLAAFPICGSLWLEVVDTNDGKELSNFCKKFEAPLRKALTQAGKLVDDPRKPRLLLTFKSGREVFLGLADA
DNSAMWPMGIPRLKFPREAPSRSTLKLEEAWHHFIPRDQWDERLSGDMTSVDLGAAPGGWTYQLVRRGMLVTAIDNGPMA
ESLMDTGLVQHLMADGFTYKPRQPVDWMVCDIVEKPARNAALLETWLGEGLCREAVVNLKLPMKQRYAEVRRLLDRIEEG
FQARGVRVSIGCKQLYHDREEVTCHLRRLDVAKAARK

Specific function: Catalyzes the 2'-O-methylation at nucleotide C2498 in 23S rRNA [H]

COG id: COG2933

COG function: function code R; Predicted SAM-dependent methyltransferase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RlmE family. RlmM subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789171, Length=363, Percent_Identity=48.7603305785124, Blast_Score=343, Evalue=9e-96,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011224
- InterPro:   IPR002877 [H]

Pfam domain/function: PF01728 FtsJ [H]

EC number: NA

Molecular weight: Translated: 40315; Mature: 40315

Theoretical pI: Translated: 7.40; Mature: 7.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTLFMHCRPGFEGEVCSEIADHAARLDVAGYAKARPDTACAEFICTEADGAERLMNGQR
CCCEEEECCCCCCHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHCCCCCHHHHHCCHH
FDKLIFPRQWARGLFLELPETDRISVILAQLAAFPICGSLWLEVVDTNDGKELSNFCKKF
HHHHHCCHHHHCCEEEECCCCCHHHHHHHHHHHHCCHHHHHEEEEECCCCHHHHHHHHHH
EAPLRKALTQAGKLVDDPRKPRLLLTFKSGREVFLGLADADNSAMWPMGIPRLKFPREAP
HHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCC
SRSTLKLEEAWHHFIPRDQWDERLSGDMTSVDLGAAPGGWTYQLVRRGMLVTAIDNGPMA
CCCCEEHHHHHHHCCCCCHHHHHHCCCCCEEECCCCCCCHHHHHHHCCEEEEEECCCCHH
ESLMDTGLVQHLMADGFTYKPRQPVDWMVCDIVEKPARNAALLETWLGEGLCREAVVNLK
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHCCC
LPMKQRYAEVRRLLDRIEEGFQARGVRVSIGCKQLYHDREEVTCHLRRLDVAKAARK
CCHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNTLFMHCRPGFEGEVCSEIADHAARLDVAGYAKARPDTACAEFICTEADGAERLMNGQR
CCCEEEECCCCCCHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHCCCCCHHHHHCCHH
FDKLIFPRQWARGLFLELPETDRISVILAQLAAFPICGSLWLEVVDTNDGKELSNFCKKF
HHHHHCCHHHHCCEEEECCCCCHHHHHHHHHHHHCCHHHHHEEEEECCCCHHHHHHHHHH
EAPLRKALTQAGKLVDDPRKPRLLLTFKSGREVFLGLADADNSAMWPMGIPRLKFPREAP
HHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCC
SRSTLKLEEAWHHFIPRDQWDERLSGDMTSVDLGAAPGGWTYQLVRRGMLVTAIDNGPMA
CCCCEEHHHHHHHCCCCCHHHHHHCCCCCEEECCCCCCCHHHHHHHCCEEEEEECCCCHH
ESLMDTGLVQHLMADGFTYKPRQPVDWMVCDIVEKPARNAALLETWLGEGLCREAVVNLK
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHCCC
LPMKQRYAEVRRLLDRIEEGFQARGVRVSIGCKQLYHDREEVTCHLRRLDVAKAARK
CCHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA