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The map label for this gene is yddE [C]

Identifier: 66046588

GI number: 66046588

Start: 4016728

End: 4017561

Strand: Direct

Name: yddE [C]

Synonym: Psyr_3359

Alternate gene names: 66046588

Gene position: 4016728-4017561 (Clockwise)

Preceding gene: 66046587

Following gene: 66046590

Centisome position: 65.92

GC content: 63.91

Gene sequence:

>834_bases
ATGACAACTGAAGTACTCAAACTGGCGGCGTTCAGCGATGGCGATCGCGGTGGCAACCCGGCAGGTGTGTGGATTGGCGA
TGCGTTACCCGATGATGCCGTCATGCAGCAGATTGCCGCCGACATCGGCTTTTCCGAAACGGCGTTCGCTGCGCCTGTCG
AAGGCGGCTGGCGGGTGCGGTATTTCTCGCCGCTGGCAGAAGTACCTTTTTGCGGGCACGCGACCATCGCCCTGGGCGCA
GCGCTGGCGGCACAGCAAGGCGATGGCGTGTTTCAGCTGACACTCAATCAGGCGCAGATTACCGTCGAGGGCCACGCGCA
GGGCTTGCTGACGTCGGCGGCGCTGCAATCGCCGCCTACCTTCAGTAAGCCGATCAGTACGCCGGTGCTGGAACAAGCCC
TGGCGCTGTTCGGCTATAGCCATGCCGATCTGGATGAGCGCATTACCCCCGCGCATATCAATGGCGGTGCCGGGCATCTG
CTGCTGGCGCTGAACAGCCGGGCCAGGCTCAAGGCCATGCGCTACGACCAGCAGGCGGGTCACGACCTGATGGTTCGTGA
AGGCTGGGCAACGATTCTGCTGGCGTGGGCCGAGACCGATCAGTTGTTCCACACCCGCAACCCGTTTGCGTTCGGCGGCG
TCTACGAGGACCCGGCCACCGGTGCGGCCACAGCAGCACTGGGCGGCTATCTGCGCGATATCGGCTGGCCGCATGGCGGT
TTGATAGACATTATTCAGGGCGAGGACATGGGCAGCCCATCGCGCCTGCGCGCCGAAATCCCGCAGCAACCGGGAAGCTC
GATCCGGGTGTCGGGGATGGCGCGCAGGTTGTAA

Upstream 100 bases:

>100_bases
CATCAGGCAAACGCATACCGTGCATCAAATGTTCTCACTGGCTAATCAAATCCTCGCCATTGCACACTGTCCCCTACTGA
CCCAGGCAAGGACACCTACG

Downstream 100 bases:

>100_bases
TACCGATCAGGTCCTGAGCTTGCTGCCGCCGATCGCCACGCCTACCAGCATCACGGCGACGATCATGAACGCCAGTTCAA
GGCTGCTGACATGGGCGATG

Product: phenazine biosynthesis PhzC/PhzF protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 276

Protein sequence:

>277_residues
MTTEVLKLAAFSDGDRGGNPAGVWIGDALPDDAVMQQIAADIGFSETAFAAPVEGGWRVRYFSPLAEVPFCGHATIALGA
ALAAQQGDGVFQLTLNQAQITVEGHAQGLLTSAALQSPPTFSKPISTPVLEQALALFGYSHADLDERITPAHINGGAGHL
LLALNSRARLKAMRYDQQAGHDLMVREGWATILLAWAETDQLFHTRNPFAFGGVYEDPATGAATAALGGYLRDIGWPHGG
LIDIIQGEDMGSPSRLRAEIPQQPGSSIRVSGMARRL

Sequences:

>Translated_277_residues
MTTEVLKLAAFSDGDRGGNPAGVWIGDALPDDAVMQQIAADIGFSETAFAAPVEGGWRVRYFSPLAEVPFCGHATIALGA
ALAAQQGDGVFQLTLNQAQITVEGHAQGLLTSAALQSPPTFSKPISTPVLEQALALFGYSHADLDERITPAHINGGAGHL
LLALNSRARLKAMRYDQQAGHDLMVREGWATILLAWAETDQLFHTRNPFAFGGVYEDPATGAATAALGGYLRDIGWPHGG
LIDIIQGEDMGSPSRLRAEIPQQPGSSIRVSGMARRL
>Mature_276_residues
TTEVLKLAAFSDGDRGGNPAGVWIGDALPDDAVMQQIAADIGFSETAFAAPVEGGWRVRYFSPLAEVPFCGHATIALGAA
LAAQQGDGVFQLTLNQAQITVEGHAQGLLTSAALQSPPTFSKPISTPVLEQALALFGYSHADLDERITPAHINGGAGHLL
LALNSRARLKAMRYDQQAGHDLMVREGWATILLAWAETDQLFHTRNPFAFGGVYEDPATGAATAALGGYLRDIGWPHGGL
IDIIQGEDMGSPSRLRAEIPQQPGSSIRVSGMARRL

Specific function: Unknown

COG id: COG0384

COG function: function code R; Predicted epimerase, PhzC/PhzF homolog

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phzF family [H]

Homologues:

Organism=Escherichia coli, GI1787737, Length=263, Percent_Identity=29.277566539924, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003719 [H]

Pfam domain/function: PF02567 PhzC-PhzF [H]

EC number: NA

Molecular weight: Translated: 29308; Mature: 29177

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTEVLKLAAFSDGDRGGNPAGVWIGDALPDDAVMQQIAADIGFSETAFAAPVEGGWRVR
CCHHHEEEEECCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCEEECCCCCCEEEE
YFSPLAEVPFCGHATIALGAALAAQQGDGVFQLTLNQAQITVEGHAQGLLTSAALQSPPT
EECCHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCEEEEEECCCCHHHHHHHHCCCCC
FSKPISTPVLEQALALFGYSHADLDERITPAHINGGAGHLLLALNSRARLKAMRYDQQAG
CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCEEEEEECCCHHHHHHHHHHHCC
HDLMVREGWATILLAWAETDQLFHTRNPFAFGGVYEDPATGAATAALGGYLRDIGWPHGG
CEEEEECCCEEEEEEECCCCHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCC
LIDIIQGEDMGSPSRLRAEIPQQPGSSIRVSGMARRL
EEEEEECCCCCCHHHHHHHCCCCCCCCEEECCHHHCC
>Mature Secondary Structure 
TTEVLKLAAFSDGDRGGNPAGVWIGDALPDDAVMQQIAADIGFSETAFAAPVEGGWRVR
CHHHEEEEECCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCEEECCCCCCEEEE
YFSPLAEVPFCGHATIALGAALAAQQGDGVFQLTLNQAQITVEGHAQGLLTSAALQSPPT
EECCHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCEEEEEECCCCHHHHHHHHCCCCC
FSKPISTPVLEQALALFGYSHADLDERITPAHINGGAGHLLLALNSRARLKAMRYDQQAG
CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCEEEEEECCCHHHHHHHHHHHCC
HDLMVREGWATILLAWAETDQLFHTRNPFAFGGVYEDPATGAATAALGGYLRDIGWPHGG
CEEEEECCCEEEEEEECCCCHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCC
LIDIIQGEDMGSPSRLRAEIPQQPGSSIRVSGMARRL
EEEEEECCCCCCHHHHHHHCCCCCCCCEEECCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]