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The map label for this gene is ykwD [H]

Identifier: 66046579

GI number: 66046579

Start: 4006206

End: 4007087

Strand: Reverse

Name: ykwD [H]

Synonym: Psyr_3350

Alternate gene names: 66046579

Gene position: 4007087-4006206 (Counterclockwise)

Preceding gene: 66046580

Following gene: 66046575

Centisome position: 65.76

GC content: 62.59

Gene sequence:

>882_bases
ATGCCTGTCATTCATTACCTTCTGCGTCTGTCGCTCCCGCGAGTGTCATTAGCCTTTCTGGCCGTGTTGTGCTCTGGCGT
TTTTTCCAGTGCTGCGCTGGCCGGTGACGAAACGCAATTGATCGAATCCCTCAATGCCTATCGCGGCCAGACGCAGCGCT
GCGGCGAGCAGGTGTCCATGGAACTGCCGCCGCTGACCAGCGACGCGCGTCTGGTGCTGCCGGCCAGTGGCAATCTGGAC
CTGCAACAGGCGCTGACCCGTGCTTCTTATCCGATGGTCACTGTGCAGGCGATAAGCCTGTCCGGTCCGAACAATGCCGA
CGCTGCACTCAAGGCGGTGCTGGAGAGTTTCTGCCGTGTGGTGCTGGACCCGCAATTCGTCGACATCGGGGTCAGCCGCG
AAGGGCGAGACTGGCGTATCGTGCTGGCGCGTTCGCTGGTCGCGTCGCGTCTTGGCGACTGGCAGGCAGAGGGGCAAAAG
ATTCTGGAAATGATCAACAACGCCCGCACTCAGGCACGCCAGTGCGGCACGCAATCCTTCGCCGCTGCCACGCCGCTGGC
CTGGAACCTGGTGCTGGGGACCGCTGCGCAACGCCATTCCCAGGCGATGGCCAATCAAAACTTTTTTGACCACAAGGATC
GCGACGGTCGCACGCCTGGCGACCGCGCCGAACTGGCCGGGTATGTGGGTCAGCAGGTGGGCGAGAACATTGCCGCCGGC
CAGGACAGTGCGCGCAAGGTGGTGGATGGCTGGCTGCTGAGCCCGGGCCACTGCGCCAACCTGATGAATCCGGATTTCCG
CGAGCTGGGCGCAGCCTACGCAATGGACCCCAAAAGTGACGCAGGAATTTACTGGACGGCAATGTTCGGCACGCAGCAGT
AG

Upstream 100 bases:

>100_bases
TCGATCGGTTGTTAAATTCCGGTCAGGCATAAAAAAGGCGTTGCGCCCGACCGGGTCATTTCGCGCATCATAGGCGGACT
CAGCCCGAGAGAGACTTTTC

Downstream 100 bases:

>100_bases
CGTCTGGCGCTGCGCTGGTAACCTGGAATCAGAAGCGGAATGCCTGACGGCCGATCAGCAACCATTGGCCGTGCTGCTTT
TGCCAGATTTGGAAGTTCTC

Product: Allergen V5/Tpx-1 related

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MPVIHYLLRLSLPRVSLAFLAVLCSGVFSSAALAGDETQLIESLNAYRGQTQRCGEQVSMELPPLTSDARLVLPASGNLD
LQQALTRASYPMVTVQAISLSGPNNADAALKAVLESFCRVVLDPQFVDIGVSREGRDWRIVLARSLVASRLGDWQAEGQK
ILEMINNARTQARQCGTQSFAAATPLAWNLVLGTAAQRHSQAMANQNFFDHKDRDGRTPGDRAELAGYVGQQVGENIAAG
QDSARKVVDGWLLSPGHCANLMNPDFRELGAAYAMDPKSDAGIYWTAMFGTQQ

Sequences:

>Translated_293_residues
MPVIHYLLRLSLPRVSLAFLAVLCSGVFSSAALAGDETQLIESLNAYRGQTQRCGEQVSMELPPLTSDARLVLPASGNLD
LQQALTRASYPMVTVQAISLSGPNNADAALKAVLESFCRVVLDPQFVDIGVSREGRDWRIVLARSLVASRLGDWQAEGQK
ILEMINNARTQARQCGTQSFAAATPLAWNLVLGTAAQRHSQAMANQNFFDHKDRDGRTPGDRAELAGYVGQQVGENIAAG
QDSARKVVDGWLLSPGHCANLMNPDFRELGAAYAMDPKSDAGIYWTAMFGTQQ
>Mature_292_residues
PVIHYLLRLSLPRVSLAFLAVLCSGVFSSAALAGDETQLIESLNAYRGQTQRCGEQVSMELPPLTSDARLVLPASGNLDL
QQALTRASYPMVTVQAISLSGPNNADAALKAVLESFCRVVLDPQFVDIGVSREGRDWRIVLARSLVASRLGDWQAEGQKI
LEMINNARTQARQCGTQSFAAATPLAWNLVLGTAAQRHSQAMANQNFFDHKDRDGRTPGDRAELAGYVGQQVGENIAAGQ
DSARKVVDGWLLSPGHCANLMNPDFRELGAAYAMDPKSDAGIYWTAMFGTQQ

Specific function: Unknown

COG id: COG2340

COG function: function code S; Uncharacterized protein with SCP/PR1 domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SCP domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014044
- InterPro:   IPR014258 [H]

Pfam domain/function: PF00188 SCP [H]

EC number: NA

Molecular weight: Translated: 31692; Mature: 31561

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVIHYLLRLSLPRVSLAFLAVLCSGVFSSAALAGDETQLIESLNAYRGQTQRCGEQVSM
CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCC
ELPPLTSDARLVLPASGNLDLQQALTRASYPMVTVQAISLSGPNNADAALKAVLESFCRV
CCCCCCCCCEEEEECCCCCCHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHH
VLDPQFVDIGVSREGRDWRIVLARSLVASRLGDWQAEGQKILEMINNARTQARQCGTQSF
HCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHH
AAATPLAWNLVLGTAAQRHSQAMANQNFFDHKDRDGRTPGDRAELAGYVGQQVGENIAAG
HHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHCC
QDSARKVVDGWLLSPGHCANLMNPDFRELGAAYAMDPKSDAGIYWTAMFGTQQ
CHHHHHHHHHHCCCCCCHHCCCCCCHHHHCCHHCCCCCCCCCEEEEEECCCCC
>Mature Secondary Structure 
PVIHYLLRLSLPRVSLAFLAVLCSGVFSSAALAGDETQLIESLNAYRGQTQRCGEQVSM
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCC
ELPPLTSDARLVLPASGNLDLQQALTRASYPMVTVQAISLSGPNNADAALKAVLESFCRV
CCCCCCCCCEEEEECCCCCCHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHH
VLDPQFVDIGVSREGRDWRIVLARSLVASRLGDWQAEGQKILEMINNARTQARQCGTQSF
HCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHH
AAATPLAWNLVLGTAAQRHSQAMANQNFFDHKDRDGRTPGDRAELAGYVGQQVGENIAAG
HHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHCC
QDSARKVVDGWLLSPGHCANLMNPDFRELGAAYAMDPKSDAGIYWTAMFGTQQ
CHHHHHHHHHHCCCCCCHHCCCCCCHHHHCCHHCCCCCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]