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The map label for this gene is csrA3

Identifier: 66046568

GI number: 66046568

Start: 3995235

End: 3995423

Strand: Direct

Name: csrA3

Synonym: Psyr_3339

Alternate gene names: 66046568

Gene position: 3995235-3995423 (Clockwise)

Preceding gene: 66046567

Following gene: 66046573

Centisome position: 65.56

GC content: 48.15

Gene sequence:

>189_bases
ATGTTGATACTCACTCGCAAAGTAGGCGAAAGCATAAACATCGGTGACGAGATCACCGTCACGATTCTTGGCGTTCAAGG
GCTTCAAGTCCGCCTGGGCATCAATGCACCCAAAAATGTTTCAGTGCATCGTGAAGAAATCTACAAACGTATCCAGGCAG
AACTGGCTCCCAACCAGGACCCACAATAA

Upstream 100 bases:

>100_bases
AGACGGATGCATTTGGATGCACTCGGCAACAATCACCACGCAAAGGCAAACGCCAGCCTCTTGAGAGAGGCGTTTTCAAG
AGGCCATCAAGGAAAAGATT

Downstream 100 bases:

>100_bases
TTCTCGCACTCCCCCTTATTCAATGCTGATTTGCCGTTTATTGGCAGACCGGCCATACGGCGTCCCTGGGACGCCGTTTT
TTATGGCCGCCATTCTGCGC

Product: carbon storage regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 62; Mature: 62

Protein sequence:

>62_residues
MLILTRKVGESINIGDEITVTILGVQGLQVRLGINAPKNVSVHREEIYKRIQAELAPNQDPQ

Sequences:

>Translated_62_residues
MLILTRKVGESINIGDEITVTILGVQGLQVRLGINAPKNVSVHREEIYKRIQAELAPNQDPQ
>Mature_62_residues
MLILTRKVGESINIGDEITVTILGVQGLQVRLGINAPKNVSVHREEIYKRIQAELAPNQDPQ

Specific function: Could accelerate the degradation of some genes transcripts potentially through selective RNA binding

COG id: COG1551

COG function: function code T; Carbon storage regulator (could also regulate swarming and quorum sensing)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CsrA family

Homologues:

Organism=Escherichia coli, GI1789047, Length=54, Percent_Identity=77.7777777777778, Blast_Score=91, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CSRA3_PSESM (Q87Z65)

Other databases:

- EMBL:   AE016853
- RefSeq:   NP_793345.1
- ProteinModelPortal:   Q87Z65
- SMR:   Q87Z65
- GeneID:   1185231
- GenomeReviews:   AE016853_GR
- KEGG:   pst:PSPTO_3566
- TIGR:   PSPTO_3566
- HOGENOM:   HBG724655
- OMA:   DIKVTIL
- ProtClustDB:   PRK01712
- BioCyc:   PSYR223283:PSPTO_3566-MONOMER
- HAMAP:   MF_00167
- InterPro:   IPR003751
- ProDom:   PD009007
- TIGRFAMs:   TIGR00202

Pfam domain/function: PF02599 CsrA

EC number: NA

Molecular weight: Translated: 6878; Mature: 6878

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLILTRKVGESINIGDEITVTILGVQGLQVRLGINAPKNVSVHREEIYKRIQAELAPNQD
CEEEECCCCCCCCCCCEEEEEEEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCC
PQ
CC
>Mature Secondary Structure
MLILTRKVGESINIGDEITVTILGVQGLQVRLGINAPKNVSVHREEIYKRIQAELAPNQD
CEEEECCCCCCCCCCCEEEEEEEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCC
PQ
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12928499