| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is gntK [H]
Identifier: 66046566
GI number: 66046566
Start: 3992589
End: 3993116
Strand: Direct
Name: gntK [H]
Synonym: Psyr_3337
Alternate gene names: 66046566
Gene position: 3992589-3993116 (Clockwise)
Preceding gene: 66046563
Following gene: 66046567
Centisome position: 65.52
GC content: 62.69
Gene sequence:
>528_bases GTGACAACTGCGAATACTGCTATTTCCGCCCTTGTGGTGATGGGTGTGTCTGGCTGCGGCAAGAGCGCCGTGGGTGCCGA GATCGCGCTGAACAGCGGCGGCCGCCTGATCGAAGGCGATGCGTTCCACCCACCGGCCAACATCGAAAAGATGAGCGCCG GAACCCCCCTCAACGACGAAGACCGTGCCGGCTGGCTGACCCGCCTGGGCGAAGAGATGGCTGCAGCCCTCGCCAAGGGT GAACACCCGGTCCTGACCTGCTCCTCGCTCAAGCTCATCTATCGCCAGCGCCTGCGTGATGCGGTGCCTGGCCTGGGTTT TGTATTTCTGGAACTCAGCAAGGAACTCGCCGCCGAACGTTGCTCGCACCGGCCTGGACACTTCATGCCCGCCAGCCTGG TGGACAGCCAGTTCGCGACCCTCGAACCGCCTTATGGCGAACCGCTGACATTGATCGTGGACGCCTCCCAGCCTATCGAT GTCATCGGCAAACAAGCCGCAGCATGGTGGAAAGGCTCTCACGCCTGA
Upstream 100 bases:
>100_bases TTGATGAGCCCAAAACAACGACAAATAACTGGAACAGCCCGGGCTGAGACTCATGTCCACCCGCAAGAAGACAGCGCTGT CTCCAGATGAGGTGCCTACT
Downstream 100 bases:
>100_bases CACAGGCATGAGTGCAAAAGACAGCGCTGTCTTGCGCACACACGATTGAAGTCGGCGCTGTTAGGCTTTGTACGAAAAGT CGGCGAGCGAAGGTCAGGCA
Product: carbohydrate kinase, thermoresistant glucokinase
Products: NA
Alternate protein names: Gluconate kinase 2 [H]
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MTTANTAISALVVMGVSGCGKSAVGAEIALNSGGRLIEGDAFHPPANIEKMSAGTPLNDEDRAGWLTRLGEEMAAALAKG EHPVLTCSSLKLIYRQRLRDAVPGLGFVFLELSKELAAERCSHRPGHFMPASLVDSQFATLEPPYGEPLTLIVDASQPID VIGKQAAAWWKGSHA
Sequences:
>Translated_175_residues MTTANTAISALVVMGVSGCGKSAVGAEIALNSGGRLIEGDAFHPPANIEKMSAGTPLNDEDRAGWLTRLGEEMAAALAKG EHPVLTCSSLKLIYRQRLRDAVPGLGFVFLELSKELAAERCSHRPGHFMPASLVDSQFATLEPPYGEPLTLIVDASQPID VIGKQAAAWWKGSHA >Mature_174_residues TTANTAISALVVMGVSGCGKSAVGAEIALNSGGRLIEGDAFHPPANIEKMSAGTPLNDEDRAGWLTRLGEEMAAALAKGE HPVLTCSSLKLIYRQRLRDAVPGLGFVFLELSKELAAERCSHRPGHFMPASLVDSQFATLEPPYGEPLTLIVDASQPIDV IGKQAAAWWKGSHA
Specific function: Gluconate utilization system GNT-I. [C]
COG id: COG3265
COG function: function code G; Gluconate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gluconokinase gntK/gntV family [H]
Homologues:
Organism=Homo sapiens, GI299758445, Length=153, Percent_Identity=41.8300653594771, Blast_Score=110, Evalue=7e-25, Organism=Escherichia coli, GI87082265, Length=161, Percent_Identity=40.3726708074534, Blast_Score=126, Evalue=8e-31, Organism=Escherichia coli, GI1790719, Length=157, Percent_Identity=39.4904458598726, Blast_Score=124, Evalue=3e-30, Organism=Caenorhabditis elegans, GI25146487, Length=173, Percent_Identity=42.1965317919075, Blast_Score=126, Evalue=5e-30, Organism=Saccharomyces cerevisiae, GI6320454, Length=146, Percent_Identity=41.0958904109589, Blast_Score=111, Evalue=7e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 - InterPro: IPR006001 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.12 [H]
Molecular weight: Translated: 18492; Mature: 18361
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTANTAISALVVMGVSGCGKSAVGAEIALNSGGRLIEGDAFHPPANIEKMSAGTPLNDE CCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEECCCCCCCCCCHHHCCCCCCCCC DRAGWLTRLGEEMAAALAKGEHPVLTCSSLKLIYRQRLRDAVPGLGFVFLELSKELAAER HHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH CSHRPGHFMPASLVDSQFATLEPPYGEPLTLIVDASQPIDVIGKQAAAWWKGSHA HCCCCCCCCCHHHHCCCHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure TTANTAISALVVMGVSGCGKSAVGAEIALNSGGRLIEGDAFHPPANIEKMSAGTPLNDE CCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEECCCCCCCCCCHHHCCCCCCCCC DRAGWLTRLGEEMAAALAKGEHPVLTCSSLKLIYRQRLRDAVPGLGFVFLELSKELAAER HHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH CSHRPGHFMPASLVDSQFATLEPPYGEPLTLIVDASQPIDVIGKQAAAWWKGSHA HCCCCCCCCCHHHHCCCHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9135111; 9278503; 8655507; 11468405 [H]