| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is glcG [H]
Identifier: 66046563
GI number: 66046563
Start: 3989572
End: 3989979
Strand: Direct
Name: glcG [H]
Synonym: Psyr_3334
Alternate gene names: 66046563
Gene position: 3989572-3989979 (Clockwise)
Preceding gene: 66046562
Following gene: 66046566
Centisome position: 65.47
GC content: 63.24
Gene sequence:
>408_bases ATGAAGATCAAAGCCGTCCTGACCCAGACCGAAGTCAGCCTGATGCTCGGCACCGCACGCGAAGAGGCGCAGGCCAATGG CTGGGCCGTGTCCATCGCCGTCGTTGATGACGGCGGCCATTTGCTGGCATTCGAGAGACTGGACGACGCCGCCGCCATCA GCAGCTACATCGCGATTGAAAAGGCGCGCACCTCGGCACTCGGCAAACGTGAATCCAAGGGGTACGAAGAGATGGTCAAT GGCGGGCGCACTGCATTCCTGAGTGCTCCGCTGCTGACGTCGCTGGAAGGCGGTGTGCCGGTCATCGTCGACGGCCAGGT CATCGGTGCGCTGGGGGTTTCAGGCGTGAAGGCCGAACAGGATGCTCAGATCGCCAGGGCCGGTGTCGCAGCGCTTGACG CCGACTGA
Upstream 100 bases:
>100_bases CGAACGCCAGTGCGGCACTGGATCGAACTGATCGACGCGGCACTTGGCACGCCTGAATCACACTGAACCCTATTCAATAA TCACTGCTCCGGAGAACCCC
Downstream 100 bases:
>100_bases CCGGTCGACCCGGCTGGTACCACGCAAGCCAGGCCACTGCTGGAGTCTTTATAGCCGGTAGATCGAAATCCAGCTCATGT CCGGATGGGTGGAGTAGATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MKIKAVLTQTEVSLMLGTAREEAQANGWAVSIAVVDDGGHLLAFERLDDAAAISSYIAIEKARTSALGKRESKGYEEMVN GGRTAFLSAPLLTSLEGGVPVIVDGQVIGALGVSGVKAEQDAQIARAGVAALDAD
Sequences:
>Translated_135_residues MKIKAVLTQTEVSLMLGTAREEAQANGWAVSIAVVDDGGHLLAFERLDDAAAISSYIAIEKARTSALGKRESKGYEEMVN GGRTAFLSAPLLTSLEGGVPVIVDGQVIGALGVSGVKAEQDAQIARAGVAALDAD >Mature_135_residues MKIKAVLTQTEVSLMLGTAREEAQANGWAVSIAVVDDGGHLLAFERLDDAAAISSYIAIEKARTSALGKRESKGYEEMVN GGRTAFLSAPLLTSLEGGVPVIVDGQVIGALGVSGVKAEQDAQIARAGVAALDAD
Specific function: Unknown
COG id: COG3193
COG function: function code R; Uncharacterized protein, possibly involved in utilization of glycolate and propanediol
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glcG family [H]
Homologues:
Organism=Escherichia coli, GI1789349, Length=116, Percent_Identity=68.1034482758621, Blast_Score=171, Evalue=1e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005624 [H]
Pfam domain/function: PF03928 DUF336 [H]
EC number: NA
Molecular weight: Translated: 13883; Mature: 13883
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKAVLTQTEVSLMLGTAREEAQANGWAVSIAVVDDGGHLLAFERLDDAAAISSYIAIE CCEEEEEEHHHEEEEECCCHHHCCCCCEEEEEEEEECCCCEEEEECCCCHHHHHHHHHHH KARTSALGKRESKGYEEMVNGGRTAFLSAPLLTSLEGGVPVIVDGQVIGALGVSGVKAEQ HHHHHHCCCCCCCCHHHHHCCCCEEEEECCHHHHCCCCCCEEECCEEEEECCCCCCCCCH DAQIARAGVAALDAD HHHHHHHCEEEECCC >Mature Secondary Structure MKIKAVLTQTEVSLMLGTAREEAQANGWAVSIAVVDDGGHLLAFERLDDAAAISSYIAIE CCEEEEEEHHHEEEEECCCHHHCCCCCEEEEEEEEECCCCEEEEECCCCHHHHHHHHHHH KARTSALGKRESKGYEEMVNGGRTAFLSAPLLTSLEGGVPVIVDGQVIGALGVSGVKAEQ HHHHHHCCCCCCCCHHHHHCCCCEEEEECCHHHHCCCCCCEEECCEEEEECCCCCCCCCH DAQIARAGVAALDAD HHHHHHHCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]