| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66046543
Identifier: 66046543
GI number: 66046543
Start: 3966313
End: 3967245
Strand: Direct
Name: 66046543
Synonym: Psyr_3314
Alternate gene names: NA
Gene position: 3966313-3967245 (Clockwise)
Preceding gene: 66046542
Following gene: 66046544
Centisome position: 65.09
GC content: 59.27
Gene sequence:
>933_bases ATGCCCACCTCAGCATTTTCCGCCAGTAACTTTTCCGGCAACCACGCAGCTCGCGACGAAAACATCGTCATCAATTCCTA CACCACCGTGCTGCGCAGGACGGGCGTTCCCCATGAGCTGTTCGCGACCTACTGGCGCGACGTTCATGGCCCGCTGTGCG CCAGGCTTGAAGGCCTGGGCTGGTATGTTCAGCATCACCTGACGCGGGAAAAGGACGGCCACCTGTGGCCGGTCATCGAA GGCGTTACGGCATTGCCGGGCTACGTGCTGGACGGTGGCGTGGAGATCGGCTTTCTGTCCTCCGAAGCGCAGAAACAATT CAAGGATGCCAGCGCCCTGCTGTTCTCCGATGAGCAGAACATGTTCGAAGAAACCATCGCCTATGACGTGCCGGATGGCT CCAGCACACTGGTGGATCGTCTGCCTGACCCGATTCCCAACGAAACCGCCACACAGGACAAGATGCATCTGCACTTTCAT CTGGCCAGCGATAACCTGCCTGCGGCCCGCAAGGCCATTGAGCAGCTCGCCCGTGACATGGCCAGTTCCGATGCGGTGCT GAAACTGCGCCTGCACCTCGCGCAACCTTACGATAACGCCAAGCCTGCACCGCCTGCGCCGGATGTTAATCATGAGGTCG AAAAGTCGCGCTTGAATATCGTCATGATGGAGTTGGTGTTCGAATCGGCCTGGACGCGCAGGACCTATTACGCCAGTGAA CACTTCAAGGCGATCACCCAAGGCCTCAGCGAGCATGTTCGCTACATCACGCCGTTCGGTGTCAGCGGTGTCTACACCTA TGTGCGCGATGCGCTGATGACCACCGCGGGCGTGCGTGGCAGCAGGCAGGCCGAGCTGATCCGTCAGTTGGGCGCGATCA ACCAGACACGGTCCGAGATCGAAAGCCTGTTTGGTGCGCCATCGACTTTTTGA
Upstream 100 bases:
>100_bases CCTGCATCGCAGCACAAGGAGGTGTCCGCCGGTAAGTTCCCTTGAACTTACCTCTGCGACACGGCGCCTGAGAAGAATAT CTTCATGACAGAGAGCCTTC
Downstream 100 bases:
>100_bases AACACATGTGACCCGCACGTCTGCTTTAACCGGCACGATTCGGAATCGTGCTTTACTCAGCAAAATGGATTTGGGTGACG CCTGTGAAAGCTCTGACGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MPTSAFSASNFSGNHAARDENIVINSYTTVLRRTGVPHELFATYWRDVHGPLCARLEGLGWYVQHHLTREKDGHLWPVIE GVTALPGYVLDGGVEIGFLSSEAQKQFKDASALLFSDEQNMFEETIAYDVPDGSSTLVDRLPDPIPNETATQDKMHLHFH LASDNLPAARKAIEQLARDMASSDAVLKLRLHLAQPYDNAKPAPPAPDVNHEVEKSRLNIVMMELVFESAWTRRTYYASE HFKAITQGLSEHVRYITPFGVSGVYTYVRDALMTTAGVRGSRQAELIRQLGAINQTRSEIESLFGAPSTF
Sequences:
>Translated_310_residues MPTSAFSASNFSGNHAARDENIVINSYTTVLRRTGVPHELFATYWRDVHGPLCARLEGLGWYVQHHLTREKDGHLWPVIE GVTALPGYVLDGGVEIGFLSSEAQKQFKDASALLFSDEQNMFEETIAYDVPDGSSTLVDRLPDPIPNETATQDKMHLHFH LASDNLPAARKAIEQLARDMASSDAVLKLRLHLAQPYDNAKPAPPAPDVNHEVEKSRLNIVMMELVFESAWTRRTYYASE HFKAITQGLSEHVRYITPFGVSGVYTYVRDALMTTAGVRGSRQAELIRQLGAINQTRSEIESLFGAPSTF >Mature_309_residues PTSAFSASNFSGNHAARDENIVINSYTTVLRRTGVPHELFATYWRDVHGPLCARLEGLGWYVQHHLTREKDGHLWPVIEG VTALPGYVLDGGVEIGFLSSEAQKQFKDASALLFSDEQNMFEETIAYDVPDGSSTLVDRLPDPIPNETATQDKMHLHFHL ASDNLPAARKAIEQLARDMASSDAVLKLRLHLAQPYDNAKPAPPAPDVNHEVEKSRLNIVMMELVFESAWTRRTYYASEH FKAITQGLSEHVRYITPFGVSGVYTYVRDALMTTAGVRGSRQAELIRQLGAINQTRSEIESLFGAPSTF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34527; Mature: 34396
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTSAFSASNFSGNHAARDENIVINSYTTVLRRTGVPHELFATYWRDVHGPLCARLEGLG CCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHH WYVQHHLTREKDGHLWPVIEGVTALPGYVLDGGVEIGFLSSEAQKQFKDASALLFSDEQN HHHHHHHCCCCCCCCCHHHHHHHHCCCEEEECCEEEEEECHHHHHHHHHHHHEEECCHHH MFEETIAYDVPDGSSTLVDRLPDPIPNETATQDKMHLHFHLASDNLPAARKAIEQLARDM HHHHHHHEECCCCCHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHH ASSDAVLKLRLHLAQPYDNAKPAPPAPDVNHEVEKSRLNIVMMELVFESAWTRRTYYASE HCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HFKAITQGLSEHVRYITPFGVSGVYTYVRDALMTTAGVRGSRQAELIRQLGAINQTRSEI HHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHH ESLFGAPSTF HHHHCCCCCC >Mature Secondary Structure PTSAFSASNFSGNHAARDENIVINSYTTVLRRTGVPHELFATYWRDVHGPLCARLEGLG CCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHH WYVQHHLTREKDGHLWPVIEGVTALPGYVLDGGVEIGFLSSEAQKQFKDASALLFSDEQN HHHHHHHCCCCCCCCCHHHHHHHHCCCEEEECCEEEEEECHHHHHHHHHHHHEEECCHHH MFEETIAYDVPDGSSTLVDRLPDPIPNETATQDKMHLHFHLASDNLPAARKAIEQLARDM HHHHHHHEECCCCCHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHH ASSDAVLKLRLHLAQPYDNAKPAPPAPDVNHEVEKSRLNIVMMELVFESAWTRRTYYASE HCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HFKAITQGLSEHVRYITPFGVSGVYTYVRDALMTTAGVRGSRQAELIRQLGAINQTRSEI HHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHH ESLFGAPSTF HHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA