Definition Pseudomonas syringae pv. syringae B728a, complete genome.
Accession NC_007005
Length 6,093,698

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The map label for this gene is 66046542

Identifier: 66046542

GI number: 66046542

Start: 3965087

End: 3966247

Strand: Direct

Name: 66046542

Synonym: Psyr_3313

Alternate gene names: NA

Gene position: 3965087-3966247 (Clockwise)

Preceding gene: 66046540

Following gene: 66046543

Centisome position: 65.07

GC content: 63.14

Gene sequence:

>1161_bases
ATGAGCAGGCTCGCAATCCTCATCAAGGGCAACGCCCCCCTCGCCGCACTGACCAGCCCGCTGGAGGCGATTCGACAATT
CACCCCCAACTGGTTCGCCGTGACCATGGGCACCGGGATTCTGTCGCTGGCCCTGGCTCAACTGCCGGGTGGCCCTGCTC
CGTTGCGTGCGGTGGGCGAAGCGTTGTGGTTCCTGAATATCGCCCTGTTCACGCTGTTCAGCGTGATGTACGCCAGCCGC
TGGTTGCTATTTTTCGATGAGGCACGTCAGGTCTTCGGGCACTCCACCGTCTCGATGTTCTTCGGCACCATCCCCATGGG
CCTGGCGACCATCATCAACGGTTTGCTGGTGTTCGGGCCGGCACGCTGGGGCAGTACCATTGTCCCGGTTGCCGAAGCCT
TGTGGTGGCTGGACGTGGCGATGGCCATGGCGTGTGGGGTGCTGATCCCTTTCATGATGTTCACCCGTCAGGAGCACAGC
ATCGAGAAGATGACCGCTGTCTGGTTGTTACCGGTGGTGGCGGCAGAAGTTGCAGCGGCCTGCGGGGGATCGCTGACGAC
GCATCTTGCAGCCGCTGACTCGCAGTTCACGGTGCTGATCACCAGCTACGTACTGTGGGCCTATTCGGTGCCTGTGGCGC
TGAGCATTCTGGTGATTCTGCTGTTGCGCCTGGCGCTGCACAAACTGCCCCACGAAAGCATGGCGGCGTCCAGCTGGCTG
GCACTCGGTCCCATCGGTACGGGCGCGCTGGGCATGCTGGTGATGGGCAGCGACGCCCCGGCGATCTTTGCCGCCCACGG
CCTGGCATCCATCGGCACGGTGGCCGCCGGCATCGGTGTGGTGGTCGGTATGCTGTTCTGGGGGCTGGGTCTGTGGTGGA
TGGCGCTGGCCGTGCTGATTACGCTGCGCTACGTGAAACAGGGTATCGGCTTCAATCTGGGCTGGTGGGCATTCACCTTC
CCGCTCGGGGTGTATGCGCTGGCGACGCTCAAACTCGGTGCTACCCTGCATCTGGGCTTCTTCGATGTCTTTGGCACGTG
GCTCGTCGCGCTGCTGGCACTGATGTGGTCGGTCGTGTCAGTACGTACGCTGGCCGGCGCCTATCGGGGTTACCTGTTCG
TCTCGCCCTGCATCGCAGCACAAGGAGGTGTCCGCCGGTAA

Upstream 100 bases:

>100_bases
CTGATAAACAGGTAGCGATGAGAGAGATTACCCGTTTAGAAGATTGACTGTCGATCCGTAGACTGATGGCACGTCCCGAA
ATCACCAGCAGGAGACTGTC

Downstream 100 bases:

>100_bases
GTTCCCTTGAACTTACCTCTGCGACACGGCGCCTGAGAAGAATATCTTCATGACAGAGAGCCTTCATGCCCACCTCAGCA
TTTTCCGCCAGTAACTTTTC

Product: C4-dicarboxylate transporter/malic acid transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 385

Protein sequence:

>386_residues
MSRLAILIKGNAPLAALTSPLEAIRQFTPNWFAVTMGTGILSLALAQLPGGPAPLRAVGEALWFLNIALFTLFSVMYASR
WLLFFDEARQVFGHSTVSMFFGTIPMGLATIINGLLVFGPARWGSTIVPVAEALWWLDVAMAMACGVLIPFMMFTRQEHS
IEKMTAVWLLPVVAAEVAAACGGSLTTHLAAADSQFTVLITSYVLWAYSVPVALSILVILLLRLALHKLPHESMAASSWL
ALGPIGTGALGMLVMGSDAPAIFAAHGLASIGTVAAGIGVVVGMLFWGLGLWWMALAVLITLRYVKQGIGFNLGWWAFTF
PLGVYALATLKLGATLHLGFFDVFGTWLVALLALMWSVVSVRTLAGAYRGYLFVSPCIAAQGGVRR

Sequences:

>Translated_386_residues
MSRLAILIKGNAPLAALTSPLEAIRQFTPNWFAVTMGTGILSLALAQLPGGPAPLRAVGEALWFLNIALFTLFSVMYASR
WLLFFDEARQVFGHSTVSMFFGTIPMGLATIINGLLVFGPARWGSTIVPVAEALWWLDVAMAMACGVLIPFMMFTRQEHS
IEKMTAVWLLPVVAAEVAAACGGSLTTHLAAADSQFTVLITSYVLWAYSVPVALSILVILLLRLALHKLPHESMAASSWL
ALGPIGTGALGMLVMGSDAPAIFAAHGLASIGTVAAGIGVVVGMLFWGLGLWWMALAVLITLRYVKQGIGFNLGWWAFTF
PLGVYALATLKLGATLHLGFFDVFGTWLVALLALMWSVVSVRTLAGAYRGYLFVSPCIAAQGGVRR
>Mature_385_residues
SRLAILIKGNAPLAALTSPLEAIRQFTPNWFAVTMGTGILSLALAQLPGGPAPLRAVGEALWFLNIALFTLFSVMYASRW
LLFFDEARQVFGHSTVSMFFGTIPMGLATIINGLLVFGPARWGSTIVPVAEALWWLDVAMAMACGVLIPFMMFTRQEHSI
EKMTAVWLLPVVAAEVAAACGGSLTTHLAAADSQFTVLITSYVLWAYSVPVALSILVILLLRLALHKLPHESMAASSWLA
LGPIGTGALGMLVMGSDAPAIFAAHGLASIGTVAAGIGVVVGMLFWGLGLWWMALAVLITLRYVKQGIGFNLGWWAFTFP
LGVYALATLKLGATLHLGFFDVFGTWLVALLALMWSVVSVRTLAGAYRGYLFVSPCIAAQGGVRR

Specific function: Unknown

COG id: COG1275

COG function: function code P; Tellurite resistance protein and related permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tellurite-resistance/dicarboxylate transporter (TDT) family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6325165, Length=418, Percent_Identity=23.6842105263158, Blast_Score=80, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004695
- InterPro:   IPR011552 [H]

Pfam domain/function: PF03595 C4dic_mal_tran [H]

EC number: NA

Molecular weight: Translated: 41218; Mature: 41087

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: PS00132 CARBOXYPEPT_ZN_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRLAILIKGNAPLAALTSPLEAIRQFTPNWFAVTMGTGILSLALAQLPGGPAPLRAVGE
CCCEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHCCCCCCHHHHHHH
ALWFLNIALFTLFSVMYASRWLLFFDEARQVFGHSTVSMFFGTIPMGLATIINGLLVFGP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC
ARWGSTIVPVAEALWWLDVAMAMACGVLIPFMMFTRQEHSIEKMTAVWLLPVVAAEVAAA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
CGGSLTTHLAAADSQFTVLITSYVLWAYSVPVALSILVILLLRLALHKLPHESMAASSWL
HCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCC
ALGPIGTGALGMLVMGSDAPAIFAAHGLASIGTVAAGIGVVVGMLFWGLGLWWMALAVLI
EECCCCCCCHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLRYVKQGIGFNLGWWAFTFPLGVYALATLKLGATLHLGFFDVFGTWLVALLALMWSVVS
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHH
VRTLAGAYRGYLFVSPCIAAQGGVRR
HHHHHHHHHCHHEECHHHHCCCCCCC
>Mature Secondary Structure 
SRLAILIKGNAPLAALTSPLEAIRQFTPNWFAVTMGTGILSLALAQLPGGPAPLRAVGE
CCEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHCCCCCCHHHHHHH
ALWFLNIALFTLFSVMYASRWLLFFDEARQVFGHSTVSMFFGTIPMGLATIINGLLVFGP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC
ARWGSTIVPVAEALWWLDVAMAMACGVLIPFMMFTRQEHSIEKMTAVWLLPVVAAEVAAA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
CGGSLTTHLAAADSQFTVLITSYVLWAYSVPVALSILVILLLRLALHKLPHESMAASSWL
HCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCC
ALGPIGTGALGMLVMGSDAPAIFAAHGLASIGTVAAGIGVVVGMLFWGLGLWWMALAVLI
EECCCCCCCHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLRYVKQGIGFNLGWWAFTFPLGVYALATLKLGATLHLGFFDVFGTWLVALLALMWSVVS
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHH
VRTLAGAYRGYLFVSPCIAAQGGVRR
HHHHHHHHHCHHEECHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]