| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
Click here to switch to the map view.
The map label for this gene is 66046542
Identifier: 66046542
GI number: 66046542
Start: 3965087
End: 3966247
Strand: Direct
Name: 66046542
Synonym: Psyr_3313
Alternate gene names: NA
Gene position: 3965087-3966247 (Clockwise)
Preceding gene: 66046540
Following gene: 66046543
Centisome position: 65.07
GC content: 63.14
Gene sequence:
>1161_bases ATGAGCAGGCTCGCAATCCTCATCAAGGGCAACGCCCCCCTCGCCGCACTGACCAGCCCGCTGGAGGCGATTCGACAATT CACCCCCAACTGGTTCGCCGTGACCATGGGCACCGGGATTCTGTCGCTGGCCCTGGCTCAACTGCCGGGTGGCCCTGCTC CGTTGCGTGCGGTGGGCGAAGCGTTGTGGTTCCTGAATATCGCCCTGTTCACGCTGTTCAGCGTGATGTACGCCAGCCGC TGGTTGCTATTTTTCGATGAGGCACGTCAGGTCTTCGGGCACTCCACCGTCTCGATGTTCTTCGGCACCATCCCCATGGG CCTGGCGACCATCATCAACGGTTTGCTGGTGTTCGGGCCGGCACGCTGGGGCAGTACCATTGTCCCGGTTGCCGAAGCCT TGTGGTGGCTGGACGTGGCGATGGCCATGGCGTGTGGGGTGCTGATCCCTTTCATGATGTTCACCCGTCAGGAGCACAGC ATCGAGAAGATGACCGCTGTCTGGTTGTTACCGGTGGTGGCGGCAGAAGTTGCAGCGGCCTGCGGGGGATCGCTGACGAC GCATCTTGCAGCCGCTGACTCGCAGTTCACGGTGCTGATCACCAGCTACGTACTGTGGGCCTATTCGGTGCCTGTGGCGC TGAGCATTCTGGTGATTCTGCTGTTGCGCCTGGCGCTGCACAAACTGCCCCACGAAAGCATGGCGGCGTCCAGCTGGCTG GCACTCGGTCCCATCGGTACGGGCGCGCTGGGCATGCTGGTGATGGGCAGCGACGCCCCGGCGATCTTTGCCGCCCACGG CCTGGCATCCATCGGCACGGTGGCCGCCGGCATCGGTGTGGTGGTCGGTATGCTGTTCTGGGGGCTGGGTCTGTGGTGGA TGGCGCTGGCCGTGCTGATTACGCTGCGCTACGTGAAACAGGGTATCGGCTTCAATCTGGGCTGGTGGGCATTCACCTTC CCGCTCGGGGTGTATGCGCTGGCGACGCTCAAACTCGGTGCTACCCTGCATCTGGGCTTCTTCGATGTCTTTGGCACGTG GCTCGTCGCGCTGCTGGCACTGATGTGGTCGGTCGTGTCAGTACGTACGCTGGCCGGCGCCTATCGGGGTTACCTGTTCG TCTCGCCCTGCATCGCAGCACAAGGAGGTGTCCGCCGGTAA
Upstream 100 bases:
>100_bases CTGATAAACAGGTAGCGATGAGAGAGATTACCCGTTTAGAAGATTGACTGTCGATCCGTAGACTGATGGCACGTCCCGAA ATCACCAGCAGGAGACTGTC
Downstream 100 bases:
>100_bases GTTCCCTTGAACTTACCTCTGCGACACGGCGCCTGAGAAGAATATCTTCATGACAGAGAGCCTTCATGCCCACCTCAGCA TTTTCCGCCAGTAACTTTTC
Product: C4-dicarboxylate transporter/malic acid transport protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 386; Mature: 385
Protein sequence:
>386_residues MSRLAILIKGNAPLAALTSPLEAIRQFTPNWFAVTMGTGILSLALAQLPGGPAPLRAVGEALWFLNIALFTLFSVMYASR WLLFFDEARQVFGHSTVSMFFGTIPMGLATIINGLLVFGPARWGSTIVPVAEALWWLDVAMAMACGVLIPFMMFTRQEHS IEKMTAVWLLPVVAAEVAAACGGSLTTHLAAADSQFTVLITSYVLWAYSVPVALSILVILLLRLALHKLPHESMAASSWL ALGPIGTGALGMLVMGSDAPAIFAAHGLASIGTVAAGIGVVVGMLFWGLGLWWMALAVLITLRYVKQGIGFNLGWWAFTF PLGVYALATLKLGATLHLGFFDVFGTWLVALLALMWSVVSVRTLAGAYRGYLFVSPCIAAQGGVRR
Sequences:
>Translated_386_residues MSRLAILIKGNAPLAALTSPLEAIRQFTPNWFAVTMGTGILSLALAQLPGGPAPLRAVGEALWFLNIALFTLFSVMYASR WLLFFDEARQVFGHSTVSMFFGTIPMGLATIINGLLVFGPARWGSTIVPVAEALWWLDVAMAMACGVLIPFMMFTRQEHS IEKMTAVWLLPVVAAEVAAACGGSLTTHLAAADSQFTVLITSYVLWAYSVPVALSILVILLLRLALHKLPHESMAASSWL ALGPIGTGALGMLVMGSDAPAIFAAHGLASIGTVAAGIGVVVGMLFWGLGLWWMALAVLITLRYVKQGIGFNLGWWAFTF PLGVYALATLKLGATLHLGFFDVFGTWLVALLALMWSVVSVRTLAGAYRGYLFVSPCIAAQGGVRR >Mature_385_residues SRLAILIKGNAPLAALTSPLEAIRQFTPNWFAVTMGTGILSLALAQLPGGPAPLRAVGEALWFLNIALFTLFSVMYASRW LLFFDEARQVFGHSTVSMFFGTIPMGLATIINGLLVFGPARWGSTIVPVAEALWWLDVAMAMACGVLIPFMMFTRQEHSI EKMTAVWLLPVVAAEVAAACGGSLTTHLAAADSQFTVLITSYVLWAYSVPVALSILVILLLRLALHKLPHESMAASSWLA LGPIGTGALGMLVMGSDAPAIFAAHGLASIGTVAAGIGVVVGMLFWGLGLWWMALAVLITLRYVKQGIGFNLGWWAFTFP LGVYALATLKLGATLHLGFFDVFGTWLVALLALMWSVVSVRTLAGAYRGYLFVSPCIAAQGGVRR
Specific function: Unknown
COG id: COG1275
COG function: function code P; Tellurite resistance protein and related permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tellurite-resistance/dicarboxylate transporter (TDT) family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6325165, Length=418, Percent_Identity=23.6842105263158, Blast_Score=80, Evalue=5e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004695 - InterPro: IPR011552 [H]
Pfam domain/function: PF03595 C4dic_mal_tran [H]
EC number: NA
Molecular weight: Translated: 41218; Mature: 41087
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: PS00132 CARBOXYPEPT_ZN_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLAILIKGNAPLAALTSPLEAIRQFTPNWFAVTMGTGILSLALAQLPGGPAPLRAVGE CCCEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHCCCCCCHHHHHHH ALWFLNIALFTLFSVMYASRWLLFFDEARQVFGHSTVSMFFGTIPMGLATIINGLLVFGP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC ARWGSTIVPVAEALWWLDVAMAMACGVLIPFMMFTRQEHSIEKMTAVWLLPVVAAEVAAA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH CGGSLTTHLAAADSQFTVLITSYVLWAYSVPVALSILVILLLRLALHKLPHESMAASSWL HCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCC ALGPIGTGALGMLVMGSDAPAIFAAHGLASIGTVAAGIGVVVGMLFWGLGLWWMALAVLI EECCCCCCCHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLRYVKQGIGFNLGWWAFTFPLGVYALATLKLGATLHLGFFDVFGTWLVALLALMWSVVS HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHH VRTLAGAYRGYLFVSPCIAAQGGVRR HHHHHHHHHCHHEECHHHHCCCCCCC >Mature Secondary Structure SRLAILIKGNAPLAALTSPLEAIRQFTPNWFAVTMGTGILSLALAQLPGGPAPLRAVGE CCEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHCCCCCCHHHHHHH ALWFLNIALFTLFSVMYASRWLLFFDEARQVFGHSTVSMFFGTIPMGLATIINGLLVFGP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC ARWGSTIVPVAEALWWLDVAMAMACGVLIPFMMFTRQEHSIEKMTAVWLLPVVAAEVAAA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH CGGSLTTHLAAADSQFTVLITSYVLWAYSVPVALSILVILLLRLALHKLPHESMAASSWL HCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCC ALGPIGTGALGMLVMGSDAPAIFAAHGLASIGTVAAGIGVVVGMLFWGLGLWWMALAVLI EECCCCCCCHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLRYVKQGIGFNLGWWAFTFPLGVYALATLKLGATLHLGFFDVFGTWLVALLALMWSVVS HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHH VRTLAGAYRGYLFVSPCIAAQGGVRR HHHHHHHHHCHHEECHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]