| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66046515
Identifier: 66046515
GI number: 66046515
Start: 3931886
End: 3932524
Strand: Reverse
Name: 66046515
Synonym: Psyr_3286
Alternate gene names: NA
Gene position: 3932524-3931886 (Counterclockwise)
Preceding gene: 66046516
Following gene: 66046514
Centisome position: 64.53
GC content: 58.37
Gene sequence:
>639_bases ATGTCCGGCTCAAGGGAGTCGGGCGCTGTTTTCGACAGGCATCCGCCTGTTTCGCCGGACTGTCCAGGCGTCACAGGCTA TGCTGTTTTCTATCCCATCGTTGTGGAGAGTGTCGCCGTGGCTCATGAGCTCTATACCCGTACCAACCAGAAAATCTATT TCGCAGGGCTCTCGCTCGAAGCGTTGGGCAGGGCGGAGAAGGGGCAGGCGGTGAACTCTCCTGCGTTGTTGCAGGCAGAG CGTGAGTCCGCGCTGTTTCATCTGTATGGTGCGCTGCTGGGCCTGTGCCACGAGATCGCTGGCTACTACCGTTTGCCGCA GGCCGGCGCGCGTCGTGCGGAAGAATTGTTGACGCAGGAAGTGCTGAACGCCATCGCCATTCCCGAAATGGCCGAGCTGT TAGAACTCGCCCAGAATCGCCAGACATGGCTTGCGCAACTAATGGCGGCCTACAACGCATTGTATGAGCCACCGCGTGCG CCGAAAAAGCTCAAGGGTGATGTCACGCAGCCGATGATACAGGCAGTGAACCTGGACGCCGAGCCGGAGTCTGAACTCTC ACGTGAAGAGCTCGAAAATTGGCGTCAACAACTCAAAGGGTTGGCCATCCGTTTTCGTGAAGGCCTGAGCGAGTGCTGA
Upstream 100 bases:
>100_bases AGAGCAATACGTCCAGACCGAAGTAGAAGGCAAGCCTACCGGCTGGCGTGCGTTCTACGACGGCAGCGCCTGGAAGGTTG AAGACAAGCGTTGATCGCAA
Downstream 100 bases:
>100_bases AAACCAATGAAGTAAGGGCTGGCAGGCTGTTACAATGCCGGCTTATCGCGGAGTAACTGTACCAATGCCTACCTCTTTCC TGGAAATTGTCGAACTGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MSGSRESGAVFDRHPPVSPDCPGVTGYAVFYPIVVESVAVAHELYTRTNQKIYFAGLSLEALGRAEKGQAVNSPALLQAE RESALFHLYGALLGLCHEIAGYYRLPQAGARRAEELLTQEVLNAIAIPEMAELLELAQNRQTWLAQLMAAYNALYEPPRA PKKLKGDVTQPMIQAVNLDAEPESELSREELENWRQQLKGLAIRFREGLSEC
Sequences:
>Translated_212_residues MSGSRESGAVFDRHPPVSPDCPGVTGYAVFYPIVVESVAVAHELYTRTNQKIYFAGLSLEALGRAEKGQAVNSPALLQAE RESALFHLYGALLGLCHEIAGYYRLPQAGARRAEELLTQEVLNAIAIPEMAELLELAQNRQTWLAQLMAAYNALYEPPRA PKKLKGDVTQPMIQAVNLDAEPESELSREELENWRQQLKGLAIRFREGLSEC >Mature_211_residues SGSRESGAVFDRHPPVSPDCPGVTGYAVFYPIVVESVAVAHELYTRTNQKIYFAGLSLEALGRAEKGQAVNSPALLQAER ESALFHLYGALLGLCHEIAGYYRLPQAGARRAEELLTQEVLNAIAIPEMAELLELAQNRQTWLAQLMAAYNALYEPPRAP KKLKGDVTQPMIQAVNLDAEPESELSREELENWRQQLKGLAIRFREGLSEC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23466; Mature: 23335
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGSRESGAVFDRHPPVSPDCPGVTGYAVFYPIVVESVAVAHELYTRTNQKIYFAGLSLE CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHH ALGRAEKGQAVNSPALLQAERESALFHLYGALLGLCHEIAGYYRLPQAGARRAEELLTQE HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH VLNAIAIPEMAELLELAQNRQTWLAQLMAAYNALYEPPRAPKKLKGDVTQPMIQAVNLDA HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHCCCC EPESELSREELENWRQQLKGLAIRFREGLSEC CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SGSRESGAVFDRHPPVSPDCPGVTGYAVFYPIVVESVAVAHELYTRTNQKIYFAGLSLE CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHH ALGRAEKGQAVNSPALLQAERESALFHLYGALLGLCHEIAGYYRLPQAGARRAEELLTQE HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH VLNAIAIPEMAELLELAQNRQTWLAQLMAAYNALYEPPRAPKKLKGDVTQPMIQAVNLDA HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHCCCC EPESELSREELENWRQQLKGLAIRFREGLSEC CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA