| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is pyrG [H]
Identifier: 66046469
GI number: 66046469
Start: 3879008
End: 3879730
Strand: Reverse
Name: pyrG [H]
Synonym: Psyr_3240
Alternate gene names: 66046469
Gene position: 3879730-3879008 (Counterclockwise)
Preceding gene: 66046470
Following gene: 66046465
Centisome position: 63.67
GC content: 65.7
Gene sequence:
>723_bases ATGGGCATAGCAGACAACACACGCAACGGGATACGCATCGGTCTGGTCGGGGACTTCAGTGCGGATGTCCCTGCGCATCA GGCCATTCCATTGGCCTTGCACAGGGCGGCGGAGGTCGCGCAGGTAGCGGTTGATATCGAATGGCTGCCGACCCCGCAGA TCGGCAGCGGTGCGCACCTCGCGGAGTTCGACGGCCTGTGGTGCGTCCCGGCCAGTCCGTATCGGGACATGCAGGGCGCG CTGACCGCCATCCGTTTCGCTCGCGAGCATCGGGTGCCGTTTCTGGGGACGTGCGGGGGCTTTCAGCACGCGTTGCTCGA GTACGCCCGCCACCAACTGGGCTGGACGGACGCCGAGCATGGCGAAACTGCGCCGGACGCGGCAAACGTGATTATCGAGC CGCTCAGTTGCTCGCTGGTCGAGTCGGTGGCAGCGATCCAGTTGCAACCCGACACGCTGATTGCCCAGGCCTATGGCAGA CTCGATATCGACGAGCGCTACCACTGCCGCTACGGCCTGCGCCGCGAGCTGGAGTCGGTGCTGTTCGGCGAGCACCTGAA GGTCAGCGGGCGCGGTCCCGAGGGCGAAGTGCGCTGTATGGAGTTGCAGGGACACCCGTTCTACGTCGCCACACTGTTCC AGCCGGAGCGCGCTGCGTTGCTGGGCCAGACGCCACCTGTGGTGGCCGCGTTTGTCCGCGCCTGCCTGAGCAACTTATCG TGA
Upstream 100 bases:
>100_bases CACGCTTGCACGCGAGGCATTGCTGTAACGCCCATTCTGCTGATTTTGCTGCCTGTTTATAGTCCGCCCGGGCTGTACGA AACCAGACAGGGAGCAGGGC
Downstream 100 bases:
>100_bases TGGCCGCGCGGTTTGCCAAGCCTTACTTCGCCGTGGTGTTCACCTCGTTGCGTACGCCTGACGATGATCAGGCGTACGCC GAGGCGGCGCAGCGCATGGT
Product: hypothetical protein
Products: NA
Alternate protein names: CTP synthetase; UTP--ammonia ligase [H]
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MGIADNTRNGIRIGLVGDFSADVPAHQAIPLALHRAAEVAQVAVDIEWLPTPQIGSGAHLAEFDGLWCVPASPYRDMQGA LTAIRFAREHRVPFLGTCGGFQHALLEYARHQLGWTDAEHGETAPDAANVIIEPLSCSLVESVAAIQLQPDTLIAQAYGR LDIDERYHCRYGLRRELESVLFGEHLKVSGRGPEGEVRCMELQGHPFYVATLFQPERAALLGQTPPVVAAFVRACLSNLS
Sequences:
>Translated_240_residues MGIADNTRNGIRIGLVGDFSADVPAHQAIPLALHRAAEVAQVAVDIEWLPTPQIGSGAHLAEFDGLWCVPASPYRDMQGA LTAIRFAREHRVPFLGTCGGFQHALLEYARHQLGWTDAEHGETAPDAANVIIEPLSCSLVESVAAIQLQPDTLIAQAYGR LDIDERYHCRYGLRRELESVLFGEHLKVSGRGPEGEVRCMELQGHPFYVATLFQPERAALLGQTPPVVAAFVRACLSNLS >Mature_239_residues GIADNTRNGIRIGLVGDFSADVPAHQAIPLALHRAAEVAQVAVDIEWLPTPQIGSGAHLAEFDGLWCVPASPYRDMQGAL TAIRFAREHRVPFLGTCGGFQHALLEYARHQLGWTDAEHGETAPDAANVIIEPLSCSLVESVAAIQLQPDTLIAQAYGRL DIDERYHCRYGLRRELESVLFGEHLKVSGRGPEGEVRCMELQGHPFYVATLFQPERAALLGQTPPVVAAFVRACLSNLS
Specific function: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen [H]
COG id: COG0504
COG function: function code F; CTP synthase (UTP-ammonia lyase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Homo sapiens, GI148491070, Length=253, Percent_Identity=24.5059288537549, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI28559085, Length=195, Percent_Identity=27.1794871794872, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI28559083, Length=195, Percent_Identity=27.1794871794872, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI221316689, Length=195, Percent_Identity=27.1794871794872, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI1789142, Length=246, Percent_Identity=28.0487804878049, Blast_Score=97, Evalue=9e-22, Organism=Saccharomyces cerevisiae, GI6319432, Length=247, Percent_Identity=26.7206477732794, Blast_Score=84, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6322563, Length=246, Percent_Identity=24.7967479674797, Blast_Score=77, Evalue=3e-15, Organism=Drosophila melanogaster, GI21357815, Length=255, Percent_Identity=23.921568627451, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI24664469, Length=255, Percent_Identity=23.921568627451, Blast_Score=79, Evalue=3e-15,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004468 - InterPro: IPR017456 - InterPro: IPR017926 - InterPro: IPR000991 [H]
Pfam domain/function: PF06418 CTP_synth_N; PF00117 GATase [H]
EC number: =6.3.4.2 [H]
Molecular weight: Translated: 26127; Mature: 25996
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIADNTRNGIRIGLVGDFSADVPAHQAIPLALHRAAEVAQVAVDIEWLPTPQIGSGAHL CCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCC AEFDGLWCVPASPYRDMQGALTAIRFAREHRVPFLGTCGGFQHALLEYARHQLGWTDAEH HHCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHCCCCCCCC GETAPDAANVIIEPLSCSLVESVAAIQLQPDTLIAQAYGRLDIDERYHCRYGLRRELESV CCCCCCCHHEEECCCHHHHHHHHHHEEECCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHH LFGEHLKVSGRGPEGEVRCMELQGHPFYVATLFQPERAALLGQTPPVVAAFVRACLSNLS HCCCCEEECCCCCCCCEEEEEECCCCEEEEEEECCHHHHHCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure GIADNTRNGIRIGLVGDFSADVPAHQAIPLALHRAAEVAQVAVDIEWLPTPQIGSGAHL CCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCC AEFDGLWCVPASPYRDMQGALTAIRFAREHRVPFLGTCGGFQHALLEYARHQLGWTDAEH HHCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHCCCCCCCC GETAPDAANVIIEPLSCSLVESVAAIQLQPDTLIAQAYGRLDIDERYHCRYGLRRELESV CCCCCCCHHEEECCCHHHHHHHHHHEEECCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHH LFGEHLKVSGRGPEGEVRCMELQGHPFYVATLFQPERAALLGQTPPVVAAFVRACLSNLS HCCCCEEECCCCCCCCEEEEEECCCCEEEEEEECCHHHHHCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA