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The map label for this gene is yibD [C]

Identifier: 66046452

GI number: 66046452

Start: 3861098

End: 3862033

Strand: Direct

Name: yibD [C]

Synonym: Psyr_3223

Alternate gene names: 66046452

Gene position: 3861098-3862033 (Clockwise)

Preceding gene: 66046451

Following gene: 66046453

Centisome position: 63.36

GC content: 59.72

Gene sequence:

>936_bases
ATGGACGACACTGTAAAAAATACCGACGAAACCTGTCTGGCGCCGCCGCTGCTGAGCGTCATATGCCCTGCCTACAACCA
GGAGGCCTTCATCGCTCAGGCGCTGGACGGGCTTTTGGCACAGCAGACCGATTTCAGGTACGAAATCCTGATCAACGACG
ACGCCTCCACAGACGCCACCGCGCGCATCATTGCGCACTACGCCGAGCGGCATCCGACGATCATTCGGACCTTCTATCAG
CAGGTCAATCAGTACAGTCAGGGCAGAGCGTGCGTCCCGGGCCTGTTTGGCGATGCACGCGGTCGCTACATCGCCTACTG
CGAAGCCGACGACTATTGGACCGATCCGCGAAAGCTGCAGCAGCAAGTGGACTTTCTCGAAGCTCATCCGGATTACGTCA
TCACCTATCACGACGCGTTCGTCTTCGATGAGCACGGCCAGTATGGCGTGCAGTTGCAAGGCCATCTGCGCGCCGATGCC
TCGGCACTGGAGTTGCAACAGGCAAGACGCCTGTCGACCCTGACCGTCTGCTTTCGCAATGTGTTCAGCCAGATGCCACC
CGAATTGAGCCTGTGCAGCGCGCCGTTGAACGATATGTGCTGGTGGTCGTTGCTGGGGGCCTACGGCAAGGGCAAGTTCA
TGGCCGGGATCAAGCCGGCCGCTTATCGGATGCACCCGGGCGGGGTGTTCTCGATGCGCAGTGACAAACGCAAGTTGCAC
ATGAACCTGCAGACCTGCTCAAGCCTGGCCAACTATTACAACCGCCTCGGCAATCAGCCGCTGTACCAGTATTTCCTGAT
GCAGACGGTGTGCCTGTCGCTGGCGGCGCTCGCCCCACGCCACAAGTTGCAGACGCTGTGCAAAGTGGCAGGCAACGTGA
TCGGCAACCTGGCCAGGCGCCTGTTGCCAGCCACCGGCAAAGCTCATGTTCAGTAG

Upstream 100 bases:

>100_bases
CGCACTCAGCGGCCTTGTCACGCTGACGCTGGTGGCGGCGAGTCACAGGCCGCTGGCATCGAAACTCTATGTTCTGTTCA
GTAAACCGAGTACTTGAGCC

Downstream 100 bases:

>100_bases
TGTGCTGGTGGTGTGCGTGGGCAACGTCTGCCGCAGTCCGATGGCCGTCGCGATGCTGCATCAACGCCTGAAAGCCACGC
AGGTACGTATTCAGTCGGCA

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MDDTVKNTDETCLAPPLLSVICPAYNQEAFIAQALDGLLAQQTDFRYEILINDDASTDATARIIAHYAERHPTIIRTFYQ
QVNQYSQGRACVPGLFGDARGRYIAYCEADDYWTDPRKLQQQVDFLEAHPDYVITYHDAFVFDEHGQYGVQLQGHLRADA
SALELQQARRLSTLTVCFRNVFSQMPPELSLCSAPLNDMCWWSLLGAYGKGKFMAGIKPAAYRMHPGGVFSMRSDKRKLH
MNLQTCSSLANYYNRLGNQPLYQYFLMQTVCLSLAALAPRHKLQTLCKVAGNVIGNLARRLLPATGKAHVQ

Sequences:

>Translated_311_residues
MDDTVKNTDETCLAPPLLSVICPAYNQEAFIAQALDGLLAQQTDFRYEILINDDASTDATARIIAHYAERHPTIIRTFYQ
QVNQYSQGRACVPGLFGDARGRYIAYCEADDYWTDPRKLQQQVDFLEAHPDYVITYHDAFVFDEHGQYGVQLQGHLRADA
SALELQQARRLSTLTVCFRNVFSQMPPELSLCSAPLNDMCWWSLLGAYGKGKFMAGIKPAAYRMHPGGVFSMRSDKRKLH
MNLQTCSSLANYYNRLGNQPLYQYFLMQTVCLSLAALAPRHKLQTLCKVAGNVIGNLARRLLPATGKAHVQ
>Mature_311_residues
MDDTVKNTDETCLAPPLLSVICPAYNQEAFIAQALDGLLAQQTDFRYEILINDDASTDATARIIAHYAERHPTIIRTFYQ
QVNQYSQGRACVPGLFGDARGRYIAYCEADDYWTDPRKLQQQVDFLEAHPDYVITYHDAFVFDEHGQYGVQLQGHLRADA
SALELQQARRLSTLTVCFRNVFSQMPPELSLCSAPLNDMCWWSLLGAYGKGKFMAGIKPAAYRMHPGGVFSMRSDKRKLH
MNLQTCSSLANYYNRLGNQPLYQYFLMQTVCLSLAALAPRHKLQTLCKVAGNVIGNLARRLLPATGKAHVQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 35026; Mature: 35026

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDTVKNTDETCLAPPLLSVICPAYNQEAFIAQALDGLLAQQTDFRYEILINDDASTDAT
CCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHH
ARIIAHYAERHPTIIRTFYQQVNQYSQGRACVPGLFGDARGRYIAYCEADDYWTDPRKLQ
HHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHH
QQVDFLEAHPDYVITYHDAFVFDEHGQYGVQLQGHLRADASALELQQARRLSTLTVCFRN
HHHHHHHCCCCEEEEEECEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
VFSQMPPELSLCSAPLNDMCWWSLLGAYGKGKFMAGIKPAAYRMHPGGVFSMRSDKRKLH
HHHHCCCCHHHHCCCHHHHHHHHHHHHCCCCCEEECCCCHHEEECCCCEEECCCCCHHHH
MNLQTCSSLANYYNRLGNQPLYQYFLMQTVCLSLAALAPRHKLQTLCKVAGNVIGNLARR
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
LLPATGKAHVQ
HCCCCCCCCCC
>Mature Secondary Structure
MDDTVKNTDETCLAPPLLSVICPAYNQEAFIAQALDGLLAQQTDFRYEILINDDASTDAT
CCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHH
ARIIAHYAERHPTIIRTFYQQVNQYSQGRACVPGLFGDARGRYIAYCEADDYWTDPRKLQ
HHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHH
QQVDFLEAHPDYVITYHDAFVFDEHGQYGVQLQGHLRADASALELQQARRLSTLTVCFRN
HHHHHHHCCCCEEEEEECEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
VFSQMPPELSLCSAPLNDMCWWSLLGAYGKGKFMAGIKPAAYRMHPGGVFSMRSDKRKLH
HHHHCCCCHHHHCCCHHHHHHHHHHHHCCCCCEEECCCCHHEEECCCCEEECCCCCHHHH
MNLQTCSSLANYYNRLGNQPLYQYFLMQTVCLSLAALAPRHKLQTLCKVAGNVIGNLARR
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
LLPATGKAHVQ
HCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]