| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is wzb [H]
Identifier: 66046453
GI number: 66046453
Start: 3862023
End: 3862475
Strand: Direct
Name: wzb [H]
Synonym: Psyr_3224
Alternate gene names: 66046453
Gene position: 3862023-3862475 (Clockwise)
Preceding gene: 66046452
Following gene: 66046454
Centisome position: 63.38
GC content: 61.59
Gene sequence:
>453_bases ATGTTCAGTAGTGTGCTGGTGGTGTGCGTGGGCAACGTCTGCCGCAGTCCGATGGCCGTCGCGATGCTGCATCAACGCCT GAAAGCCACGCAGGTACGTATTCAGTCGGCAGGCATCGCTGCGTTATCGGGTTCGTCGATCGACCCGACAGCACATGCGG TTCTGCAGTCGCACCGGGTTCAACCTCAGCGGCACGCCGCTCGCCAGATGAGTCGCGAGCTGCTGCGCCAGGCCGACCTG ATCCTGCTGATGGAGCAGGCGCATTTTTCCGACGTCCTCGACCTTGCCCCCGAAGTGCGCGGCAAAGCCTTTCTGATCGG TAAATGGCAGGACCCGCTCGACATCACCGACCCTTACCGGCGCCCCGCGTCAGCCTTCGAGCAGACCTACGCGCAGCTCT CACGCTGCATTGACGACTGGCTTCCCCATTTTCAGTCAGGAGCAACAGGATAA
Upstream 100 bases:
>100_bases GCGCTCGCCCCACGCCACAAGTTGCAGACGCTGTGCAAAGTGGCAGGCAACGTGATCGGCAACCTGGCCAGGCGCCTGTT GCCAGCCACCGGCAAAGCTC
Downstream 100 bases:
>100_bases ATGACCGCCATGAACCATCCTTCCCTGAATTTCCAACCGGACTCCCGGATTGATCTGGCAACAGTCCTGCGCATGCTGTT CGATCACAAAGCCCTGATCC
Product: low molecular weight phosphotyrosine protein phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MFSSVLVVCVGNVCRSPMAVAMLHQRLKATQVRIQSAGIAALSGSSIDPTAHAVLQSHRVQPQRHAARQMSRELLRQADL ILLMEQAHFSDVLDLAPEVRGKAFLIGKWQDPLDITDPYRRPASAFEQTYAQLSRCIDDWLPHFQSGATG
Sequences:
>Translated_150_residues MFSSVLVVCVGNVCRSPMAVAMLHQRLKATQVRIQSAGIAALSGSSIDPTAHAVLQSHRVQPQRHAARQMSRELLRQADL ILLMEQAHFSDVLDLAPEVRGKAFLIGKWQDPLDITDPYRRPASAFEQTYAQLSRCIDDWLPHFQSGATG >Mature_150_residues MFSSVLVVCVGNVCRSPMAVAMLHQRLKATQVRIQSAGIAALSGSSIDPTAHAVLQSHRVQPQRHAARQMSRELLRQADL ILLMEQAHFSDVLDLAPEVRGKAFLIGKWQDPLDITDPYRRPASAFEQTYAQLSRCIDDWLPHFQSGATG
Specific function: Dephosphorylates wzc. Required for the extracellular polysaccharide colanic acid synthesis. Probably involved in the export of colanic acid from the cell to medium [H]
COG id: COG0394
COG function: function code T; Protein-tyrosine-phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the low molecular weight phosphotyrosine protein phosphatase family [H]
Homologues:
Organism=Homo sapiens, GI6005988, Length=143, Percent_Identity=34.2657342657343, Blast_Score=75, Evalue=2e-14, Organism=Homo sapiens, GI4757714, Length=148, Percent_Identity=32.4324324324324, Blast_Score=75, Evalue=2e-14, Organism=Escherichia coli, GI1788375, Length=140, Percent_Identity=45, Blast_Score=131, Evalue=2e-32, Organism=Escherichia coli, GI87081812, Length=139, Percent_Identity=43.8848920863309, Blast_Score=120, Evalue=3e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000106 - InterPro: IPR017867 [H]
Pfam domain/function: PF01451 LMWPc [H]
EC number: =3.1.3.48 [H]
Molecular weight: Translated: 16618; Mature: 16618
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSSVLVVCVGNVCRSPMAVAMLHQRLKATQVRIQSAGIAALSGSSIDPTAHAVLQSHRV CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHCC QPQRHAARQMSRELLRQADLILLMEQAHFSDVLDLAPEVRGKAFLIGKWQDPLDITDPYR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCC RPASAFEQTYAQLSRCIDDWLPHFQSGATG CHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MFSSVLVVCVGNVCRSPMAVAMLHQRLKATQVRIQSAGIAALSGSSIDPTAHAVLQSHRV CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHCC QPQRHAARQMSRELLRQADLILLMEQAHFSDVLDLAPEVRGKAFLIGKWQDPLDITDPYR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCC RPASAFEQTYAQLSRCIDDWLPHFQSGATG CHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]