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The map label for this gene is yybD [H]

Identifier: 66046423

GI number: 66046423

Start: 3824036

End: 3824458

Strand: Direct

Name: yybD [H]

Synonym: Psyr_3194

Alternate gene names: 66046423

Gene position: 3824036-3824458 (Clockwise)

Preceding gene: 66046422

Following gene: 66046424

Centisome position: 62.75

GC content: 58.87

Gene sequence:

>423_bases
ATGAATAAAGTCACTGTAGCTGTCGCCCAATGGCAGAAGAACAACGCCGATATCCGGCGCATACGCGATTCGGTATTCAT
TGCCGAACAATCGGTGCCGCCGGAACTGGAGTGGGATGCCGAAGACGCAGGTGCCGTGCACTTTCTTGCGTACGAGGGTG
AATATGCGGTGGGCACTGCCCGACTGCTGCCCGATGGCGAGATCGGTCGCCTGTCAGTCCTGAGAGACTGGCGTGGCCTG
AAGGTCGGTGAGGCTCTGTTGGATGCCGTGATCCATGAAGCCGAACAGCGTGGCCTCAAGCCGCTCAAGCTGAGCGCTCA
GGTGCAGGCCGTCGAGTTTTATCAGCGCTTCGGCTTTTCGGTTATCAGCGACGAGTTTCTCGAAGCCGGCCTGCCACACG
TCGATATGCTCCGCGAAGCGTGA

Upstream 100 bases:

>100_bases
GATGCGTTGCACAGCGAAAACCTCGGCCAATGGTTGGCCGATGACGAGGGGCGCAATTTGCTTTGCGAACTCGTAAAACA
AGGAAGCCTGGGATTTGCCG

Downstream 100 bases:

>100_bases
TCAACGCCGTTATGTAGGCGCTCACCGCGGCACTACATAATGATCGCCCTGCCCTTTTTCGCTAGACCCTCTCAAGGTCG
AACCGAAAAGCGGCAGGGCT

Product: GCN5-related N-acetyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MNKVTVAVAQWQKNNADIRRIRDSVFIAEQSVPPELEWDAEDAGAVHFLAYEGEYAVGTARLLPDGEIGRLSVLRDWRGL
KVGEALLDAVIHEAEQRGLKPLKLSAQVQAVEFYQRFGFSVISDEFLEAGLPHVDMLREA

Sequences:

>Translated_140_residues
MNKVTVAVAQWQKNNADIRRIRDSVFIAEQSVPPELEWDAEDAGAVHFLAYEGEYAVGTARLLPDGEIGRLSVLRDWRGL
KVGEALLDAVIHEAEQRGLKPLKLSAQVQAVEFYQRFGFSVISDEFLEAGLPHVDMLREA
>Mature_140_residues
MNKVTVAVAQWQKNNADIRRIRDSVFIAEQSVPPELEWDAEDAGAVHFLAYEGEYAVGTARLLPDGEIGRLSVLRDWRGL
KVGEALLDAVIHEAEQRGLKPLKLSAQVQAVEFYQRFGFSVISDEFLEAGLPHVDMLREA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

Organism=Escherichia coli, GI1788602, Length=128, Percent_Identity=32.03125, Blast_Score=65, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17557716, Length=121, Percent_Identity=33.8842975206612, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181 [H]

Pfam domain/function: PF00583 Acetyltransf_1 [H]

EC number: NA

Molecular weight: Translated: 15662; Mature: 15662

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKVTVAVAQWQKNNADIRRIRDSVFIAEQSVPPELEWDAEDAGAVHFLAYEGEYAVGTA
CCCEEEEEEECCCCCCHHHHHHHHHEEECCCCCCCCCCCCCCCCEEEEEEECCCEEEEEE
RLLPDGEIGRLSVLRDWRGLKVGEALLDAVIHEAEQRGLKPLKLSAQVQAVEFYQRFGFS
EECCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCH
VISDEFLEAGLPHVDMLREA
HHHHHHHHCCCCHHHHHHCC
>Mature Secondary Structure
MNKVTVAVAQWQKNNADIRRIRDSVFIAEQSVPPELEWDAEDAGAVHFLAYEGEYAVGTA
CCCEEEEEEECCCCCCHHHHHHHHHEEECCCCCCCCCCCCCCCCEEEEEEECCCEEEEEE
RLLPDGEIGRLSVLRDWRGLKVGEALLDAVIHEAEQRGLKPLKLSAQVQAVEFYQRFGFS
EECCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCH
VISDEFLEAGLPHVDMLREA
HHHHHHHHCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]