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The map label for this gene is lolA [H]

Identifier: 66046407

GI number: 66046407

Start: 3805304

End: 3805927

Strand: Reverse

Name: lolA [H]

Synonym: Psyr_3178

Alternate gene names: 66046407

Gene position: 3805927-3805304 (Counterclockwise)

Preceding gene: 66046408

Following gene: 66046406

Centisome position: 62.46

GC content: 58.33

Gene sequence:

>624_bases
ATGCGCCTTATCCGCATGCTGTTGGCCACCGCACTGACCTTCTCCATGATCCCCGCCCATGCCGACAGCAAGGACGTGGC
GCGCCTGACCCAGTTGCTGGAGAAATCCCAGACCCTGACCGCCCGCTTCTCGCAACTGACGCTGGATGGTGGCGGTACCC
AGTTGCAGGAAACCACCGGCGAAATGGCCCTGCAGCGCCCCGGCTTGTTCAACTGGCACACCGATGCGCCACAGGAACAG
TTGATGGTCTCGGACGGCAAGAAAGTTTCGCTGTGGGACCCTGATCTGGAGCAGGTCACGATCAAGAAACTCGATCAGCG
CCTGACCCAGACTCCAGCCTTGCTGCTGTCCGGTGACGTATCGAAGATCAGCGAAAGCTTCGACATCACCGCGAAAGAAG
CAGGTGGCGTGATCGATTTCACGCTCAAGCCCAAAACCAAGGACACGCTGTTCGACAGCCTGCGCCTGTCGTTTCGCAAC
GGCATCATCAACGACATGCAGTTGATCGACAGCGTCGGGCAGCGCACCAATATCCTGTTCACCGGGGTCAAGGCCAACGA
GTCGATCGCAGCCAGCAAGTTTCAGTTCCAGATTCCCAAGGGCGCTGATGTCATTCAAGAGTAA

Upstream 100 bases:

>100_bases
CCCCCGGGCCGGTGCGCGACTGATTTTTTACCACCCCGTATTGCGGCGACGGCGTGCACGCCACGCCGTCGCATCATCAT
CGACTTCAAAGAGGAATCCA

Downstream 100 bases:

>100_bases
AAGGGCCGATTTCTGACCATGGATTTGTTCAGCCGCGAACCGATAGCCCAGCCTCTGGCTGCACGTTTGCGTGCTACCAA
CCTGGATGAATATGTCGGTC

Product: outer-membrane lipoprotein carrier protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MRLIRMLLATALTFSMIPAHADSKDVARLTQLLEKSQTLTARFSQLTLDGGGTQLQETTGEMALQRPGLFNWHTDAPQEQ
LMVSDGKKVSLWDPDLEQVTIKKLDQRLTQTPALLLSGDVSKISESFDITAKEAGGVIDFTLKPKTKDTLFDSLRLSFRN
GIINDMQLIDSVGQRTNILFTGVKANESIAASKFQFQIPKGADVIQE

Sequences:

>Translated_207_residues
MRLIRMLLATALTFSMIPAHADSKDVARLTQLLEKSQTLTARFSQLTLDGGGTQLQETTGEMALQRPGLFNWHTDAPQEQ
LMVSDGKKVSLWDPDLEQVTIKKLDQRLTQTPALLLSGDVSKISESFDITAKEAGGVIDFTLKPKTKDTLFDSLRLSFRN
GIINDMQLIDSVGQRTNILFTGVKANESIAASKFQFQIPKGADVIQE
>Mature_207_residues
MRLIRMLLATALTFSMIPAHADSKDVARLTQLLEKSQTLTARFSQLTLDGGGTQLQETTGEMALQRPGLFNWHTDAPQEQ
LMVSDGKKVSLWDPDLEQVTIKKLDQRLTQTPALLLSGDVSKISESFDITAKEAGGVIDFTLKPKTKDTLFDSLRLSFRN
GIINDMQLIDSVGQRTNILFTGVKANESIAASKFQFQIPKGADVIQE

Specific function: Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the l

COG id: COG2834

COG function: function code M; Outer membrane lipoprotein-sorting protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lolA family [H]

Homologues:

Organism=Escherichia coli, GI145693108, Length=201, Percent_Identity=29.3532338308458, Blast_Score=97, Evalue=1e-21,

Paralogues:

None

Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004564
- InterPro:   IPR018323 [H]

Pfam domain/function: PF03548 LolA [H]

EC number: NA

Molecular weight: Translated: 22882; Mature: 22882

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLIRMLLATALTFSMIPAHADSKDVARLTQLLEKSQTLTARFSQLTLDGGGTQLQETTG
CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHH
EMALQRPGLFNWHTDAPQEQLMVSDGKKVSLWDPDLEQVTIKKLDQRLTQTPALLLSGDV
HHHHCCCCCCCCCCCCCHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCCHHEEECCH
SKISESFDITAKEAGGVIDFTLKPKTKDTLFDSLRLSFRNGIINDMQLIDSVGQRTNILF
HHHHHHCCCEECCCCCEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEE
TGVKANESIAASKFQFQIPKGADVIQE
EECCCCCCHHHCEEEEECCCCCHHHCC
>Mature Secondary Structure
MRLIRMLLATALTFSMIPAHADSKDVARLTQLLEKSQTLTARFSQLTLDGGGTQLQETTG
CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHH
EMALQRPGLFNWHTDAPQEQLMVSDGKKVSLWDPDLEQVTIKKLDQRLTQTPALLLSGDV
HHHHCCCCCCCCCCCCCHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCCHHEEECCH
SKISESFDITAKEAGGVIDFTLKPKTKDTLFDSLRLSFRNGIINDMQLIDSVGQRTNILF
HHHHHHCCCEECCCCCEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEE
TGVKANESIAASKFQFQIPKGADVIQE
EECCCCCCHHHCEEEEECCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA