| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is mmlH [H]
Identifier: 66046363
GI number: 66046363
Start: 3759349
End: 3760635
Strand: Reverse
Name: mmlH [H]
Synonym: Psyr_3134
Alternate gene names: 66046363
Gene position: 3760635-3759349 (Counterclockwise)
Preceding gene: 66046364
Following gene: 66046362
Centisome position: 61.71
GC content: 60.99
Gene sequence:
>1287_bases ATGTTCAGCTGGTATCGCGATGTCACTTCCAAAGAGCGCAAGACCTTCTGGGCCTGTTTTGGCGGCTGGTCGCTGGACGC GCTGGAAGTGCAGATGTTCGGTCTGGCCATTCCGGCCCTGATTGCTGCCTTTGCCCTGACCAAGGGCGATGCCGGCCTGA TCAGTGCGGTAACGCTGGTGACCTCCGCGTTGGGTGGTTGGGTGGGCGGGGCGCTGTCCGACCGCTACGGCCGGGTGCGC ACGCTGCAGTGGATGATCCTGTGGTTTTCCTTGTTTACCTTTTTGTCTGCGTTCGTGACCGGTTTCAACCAATTGCTGAT CGTCAAGGCACTGCAGGGCTTTGGTATCGGTGGCGAGTGGGCGGCAGGCGCGGTGTTGATGGCCGAGACGATCCAGTCCC GCTACCGCGGCAAAGTCATGGCCACTGTGCAAAGTGCCTGGGCCGTGGGTTGGGGGCTGGCGGTGGTGCTGTTTACCCTG ATTTATTCATTTGTGCCGGAGGATATCGCCTGGCGGGTGATGTTCTTTGTCGGCCTGTTGCCTGCCCTGATGATCATCTG GGTGCGACGCAACGTCGAAGAGCCGGACAGTTTTCAGCGCATGCAGAAAAGCGCTGCGCCGAAGGGCAGTTTCTTCAGAT CGATGGCCGGGATTTTTCGCCCCGAGCTGCTGCGCGTTACCTTGCTCGGTGGCTTGCTGGGCCTCGGTGCGCACGGCGGT TATCACGCGGTCATGACCTGGTTGCCGACCTTCCTCAAAACCGAGCGCAACCTGTCCGTGCTCAGTTCCGGCGGCTATCT GGCGGTCATTATCGTTGCCTTCTGGTGCGGTTGCGTGTGCAGCGGCCTGTTGATCGACCGTATTGGTCGACGCAAGAACA TCATGCTGTTCGCCTTGTGCTGCGTGGTCACCGTGCAGTGCTACTTGATGCTGCCGTTGAGCAACACACAGATGCTGTTT CTCGGCTTTCCGCTGGGCTTCTTTGCCGCAGGCATTCCGGCCAGCCTCGGCTCGTTTTTCAACGAGCTGTACCCGGCAGA GGTGCGGGGTGCCGGGGTGGGCTTCTGCTACAACTTCGGGCGTGTGCTGTCGGCAGTGTTCCCGTTTCTGGTGGGGCATA TGAGCCAGTCAATGTCGCTCGGCAGCGCCATCGGAATCGACGCCGGCATTGCCTATGGCGTGGCGATGATTGCTGCGTTC TGTCTGCCGGAAACCCGTGGGCGCAACCTCGAGGCCACGCCGCCGGTTGCCGAACCACTGGACAAGGGCGCAGCGCAGCA GGCTTGA
Upstream 100 bases:
>100_bases CGTTCGCGAGGGCACGCCAGTCATTTCCGCTACAGCGTGGAAATTCGCTGACAGCGCTGCAGCCTGCCCAAGCTGTTCAA CGCCCATAAGGATAAAAGCC
Downstream 100 bases:
>100_bases AAATCCTCTCATCCGCGGCGTTGCGGCGCCGCGTTGACTTCTTGTAGACGGACCCATGATTGATTCCTGTACCACACCAA TGCTGGGCATCGATGCCCAC
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 428; Mature: 428
Protein sequence:
>428_residues MFSWYRDVTSKERKTFWACFGGWSLDALEVQMFGLAIPALIAAFALTKGDAGLISAVTLVTSALGGWVGGALSDRYGRVR TLQWMILWFSLFTFLSAFVTGFNQLLIVKALQGFGIGGEWAAGAVLMAETIQSRYRGKVMATVQSAWAVGWGLAVVLFTL IYSFVPEDIAWRVMFFVGLLPALMIIWVRRNVEEPDSFQRMQKSAAPKGSFFRSMAGIFRPELLRVTLLGGLLGLGAHGG YHAVMTWLPTFLKTERNLSVLSSGGYLAVIIVAFWCGCVCSGLLIDRIGRRKNIMLFALCCVVTVQCYLMLPLSNTQMLF LGFPLGFFAAGIPASLGSFFNELYPAEVRGAGVGFCYNFGRVLSAVFPFLVGHMSQSMSLGSAIGIDAGIAYGVAMIAAF CLPETRGRNLEATPPVAEPLDKGAAQQA
Sequences:
>Translated_428_residues MFSWYRDVTSKERKTFWACFGGWSLDALEVQMFGLAIPALIAAFALTKGDAGLISAVTLVTSALGGWVGGALSDRYGRVR TLQWMILWFSLFTFLSAFVTGFNQLLIVKALQGFGIGGEWAAGAVLMAETIQSRYRGKVMATVQSAWAVGWGLAVVLFTL IYSFVPEDIAWRVMFFVGLLPALMIIWVRRNVEEPDSFQRMQKSAAPKGSFFRSMAGIFRPELLRVTLLGGLLGLGAHGG YHAVMTWLPTFLKTERNLSVLSSGGYLAVIIVAFWCGCVCSGLLIDRIGRRKNIMLFALCCVVTVQCYLMLPLSNTQMLF LGFPLGFFAAGIPASLGSFFNELYPAEVRGAGVGFCYNFGRVLSAVFPFLVGHMSQSMSLGSAIGIDAGIAYGVAMIAAF CLPETRGRNLEATPPVAEPLDKGAAQQA >Mature_428_residues MFSWYRDVTSKERKTFWACFGGWSLDALEVQMFGLAIPALIAAFALTKGDAGLISAVTLVTSALGGWVGGALSDRYGRVR TLQWMILWFSLFTFLSAFVTGFNQLLIVKALQGFGIGGEWAAGAVLMAETIQSRYRGKVMATVQSAWAVGWGLAVVLFTL IYSFVPEDIAWRVMFFVGLLPALMIIWVRRNVEEPDSFQRMQKSAAPKGSFFRSMAGIFRPELLRVTLLGGLLGLGAHGG YHAVMTWLPTFLKTERNLSVLSSGGYLAVIIVAFWCGCVCSGLLIDRIGRRKNIMLFALCCVVTVQCYLMLPLSNTQMLF LGFPLGFFAAGIPASLGSFFNELYPAEVRGAGVGFCYNFGRVLSAVFPFLVGHMSQSMSLGSAIGIDAGIAYGVAMIAAF CLPETRGRNLEATPPVAEPLDKGAAQQA
Specific function: Probable uptake of 4-methylmuconolactone [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI24308167, Length=438, Percent_Identity=24.8858447488584, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI213021148, Length=441, Percent_Identity=23.3560090702948, Blast_Score=81, Evalue=2e-15, Organism=Escherichia coli, GI87082404, Length=386, Percent_Identity=25.3886010362694, Blast_Score=129, Evalue=3e-31, Organism=Escherichia coli, GI87082231, Length=220, Percent_Identity=28.1818181818182, Blast_Score=99, Evalue=4e-22, Organism=Escherichia coli, GI1790550, Length=406, Percent_Identity=24.8768472906404, Blast_Score=96, Evalue=4e-21, Organism=Escherichia coli, GI87081723, Length=369, Percent_Identity=27.9132791327913, Blast_Score=95, Evalue=1e-20, Organism=Escherichia coli, GI87082159, Length=365, Percent_Identity=23.2876712328767, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1789152, Length=342, Percent_Identity=24.8538011695906, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1788942, Length=355, Percent_Identity=23.943661971831, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1788292, Length=159, Percent_Identity=29.559748427673, Blast_Score=66, Evalue=5e-12, Organism=Caenorhabditis elegans, GI32564663, Length=434, Percent_Identity=24.6543778801843, Blast_Score=100, Evalue=3e-21, Organism=Drosophila melanogaster, GI19922874, Length=412, Percent_Identity=22.8155339805825, Blast_Score=71, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 46439; Mature: 46439
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1 ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSWYRDVTSKERKTFWACFGGWSLDALEVQMFGLAIPALIAAFALTKGDAGLISAVTLV CCCHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH TSALGGWVGGALSDRYGRVRTLQWMILWFSLFTFLSAFVTGFNQLLIVKALQGFGIGGEW HHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH AAGAVLMAETIQSRYRGKVMATVQSAWAVGWGLAVVLFTLIYSFVPEDIAWRVMFFVGLL HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH PALMIIWVRRNVEEPDSFQRMQKSAAPKGSFFRSMAGIFRPELLRVTLLGGLLGLGAHGG HHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC YHAVMTWLPTFLKTERNLSVLSSGGYLAVIIVAFWCGCVCSGLLIDRIGRRKNIMLFALC HHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH CVVTVQCYLMLPLSNTQMLFLGFPLGFFAAGIPASLGSFFNELYPAEVRGAGVGFCYNFG HHHHHHHHHEEECCCCEEEEEECCHHHHHHCCHHHHHHHHHHHCCHHHCCCCHHHHHHHH RVLSAVFPFLVGHMSQSMSLGSAIGIDAGIAYGVAMIAAFCLPETRGRNLEATPPVAEPL HHHHHHHHHHHHHHHHHHCCCCHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH DKGAAQQA HCCCCCCC >Mature Secondary Structure MFSWYRDVTSKERKTFWACFGGWSLDALEVQMFGLAIPALIAAFALTKGDAGLISAVTLV CCCHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH TSALGGWVGGALSDRYGRVRTLQWMILWFSLFTFLSAFVTGFNQLLIVKALQGFGIGGEW HHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH AAGAVLMAETIQSRYRGKVMATVQSAWAVGWGLAVVLFTLIYSFVPEDIAWRVMFFVGLL HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH PALMIIWVRRNVEEPDSFQRMQKSAAPKGSFFRSMAGIFRPELLRVTLLGGLLGLGAHGG HHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC YHAVMTWLPTFLKTERNLSVLSSGGYLAVIIVAFWCGCVCSGLLIDRIGRRKNIMLFALC HHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH CVVTVQCYLMLPLSNTQMLFLGFPLGFFAAGIPASLGSFFNELYPAEVRGAGVGFCYNFG HHHHHHHHHEEECCCCEEEEEECCHHHHHHCCHHHHHHHHHHHCCHHHCCCCHHHHHHHH RVLSAVFPFLVGHMSQSMSLGSAIGIDAGIAYGVAMIAAFCLPETRGRNLEATPPVAEPL HHHHHHHHHHHHHHHHHHCCCCHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH DKGAAQQA HCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9461415 [H]