| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is glxK [H]
Identifier: 66046344
GI number: 66046344
Start: 3733543
End: 3734682
Strand: Reverse
Name: glxK [H]
Synonym: Psyr_3115
Alternate gene names: 66046344
Gene position: 3734682-3733543 (Counterclockwise)
Preceding gene: 66046345
Following gene: 66046343
Centisome position: 61.29
GC content: 66.93
Gene sequence:
>1140_bases ATGAAAATAGTCATCGCCCCCGACTCGTTCAAGGACAGCCTCAGCGCCCAGGCAGTTGCCGACGCGATCGCCAGTGGTCT GGCCGAAGTCTGGCCGCACGCCGAGTTGATCAAATGCCCGATGGCAGACGGCGGGGAGGGCACCATCGAGGCGCTGCTGG CTGCCTGCAATGGCGAACTGATGAGCGCCAGCGTCAGCGGCCCGCTGGGCGCCCCGGTCAATGCCCAGTGGGGCTGGCTG GCGGACAGCAGGACCGCAATCATCGAAATGGCCATGGCCAGCGGTCTGCAACTGCTGACCCTGGCACAACGCGACGCCTG CGTGACCAGCACGGAAGGCACCGGCCAGTTGATCTCGGCGGCACTGGATGCGGGAGCCCGTCGGGTGATCCTGGCCATCG GCGGCAGCGCAACCAATGACGGCGGCAGCGGCATGCTTTCAGCCTTGGGTGCACGCTTTCTGGATGCCGACGATCAACCG CTGGCGCCGGGCGGGCTTGCGCTTGCGAACCTGGCGCGTATCGACCTGAGCGGTTTCGATCCACGCTTGTCTGACGTGCG CGTCGAGATCGCCGCCGACGTCGATAACCCCCTCTGCGGGCCGAATGGCGCCTCCTCTGTCTTCGGCCCGCAAAAAGGCG CATCGCCCGAGCAGGTCGTGGCGCTGGACGCCGCACTCGGCTGTTTTGCCGACCAAACGGCTCAGGTTCTCGGCCAGGAC TTGCGCGACAGCCCTGGCAGCGGTGCAGCGGGGGGCATGGGCTTTGCCGCCAAGGCCTACCTGAAGGCCTCGTTTCGTGC CGGCGTGGAAGTGGTGGCCGAACTGACCGGGCTGGAACAGGCGCTGATCGGTGCCGATCTGGTCATCACCGGCGAAGGCC GTTTCGACGCGCAAACCCTGCGTGGCAAGACACCGCTTGGTGTTGCGCGAGTCGCCCAGCGTCGGCAAGTGCCGGTGATT GTGCTGGCGGGAACCCTTGGCGACGGCTATGAGCAGATGTATGCGCACGGCATCGGCGCAGCCTTTGCTCTGGTCAGCGG CCCAATGAGCCTCGAGCAGGCCTGCCGCGAGACCCGCCGCCTGCTGCACGAGCGTGCGCGCGACGTGGCGCGGCTCTGGC AAATGGCTTCGGGCGGTTGA
Upstream 100 bases:
>100_bases GTTCAAACGCCCGATAATGGCGACGGATCATTGTGCGAGCGGCAGGCGGCAAGCACGGTCTTGAATGAGAGCATTCGAGC ACCGGATCTGGAGAACAACA
Downstream 100 bases:
>100_bases TGACTGCGCTGTGATCAGCGGGCACCGGACGAGCGATTGGCCGTTATTTTAAGTAACCCTGCAAATGATCACTGGGCGTC CTAAAGAATTATTTGATCAG
Product: glycerate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 379; Mature: 379
Protein sequence:
>379_residues MKIVIAPDSFKDSLSAQAVADAIASGLAEVWPHAELIKCPMADGGEGTIEALLAACNGELMSASVSGPLGAPVNAQWGWL ADSRTAIIEMAMASGLQLLTLAQRDACVTSTEGTGQLISAALDAGARRVILAIGGSATNDGGSGMLSALGARFLDADDQP LAPGGLALANLARIDLSGFDPRLSDVRVEIAADVDNPLCGPNGASSVFGPQKGASPEQVVALDAALGCFADQTAQVLGQD LRDSPGSGAAGGMGFAAKAYLKASFRAGVEVVAELTGLEQALIGADLVITGEGRFDAQTLRGKTPLGVARVAQRRQVPVI VLAGTLGDGYEQMYAHGIGAAFALVSGPMSLEQACRETRRLLHERARDVARLWQMASGG
Sequences:
>Translated_379_residues MKIVIAPDSFKDSLSAQAVADAIASGLAEVWPHAELIKCPMADGGEGTIEALLAACNGELMSASVSGPLGAPVNAQWGWL ADSRTAIIEMAMASGLQLLTLAQRDACVTSTEGTGQLISAALDAGARRVILAIGGSATNDGGSGMLSALGARFLDADDQP LAPGGLALANLARIDLSGFDPRLSDVRVEIAADVDNPLCGPNGASSVFGPQKGASPEQVVALDAALGCFADQTAQVLGQD LRDSPGSGAAGGMGFAAKAYLKASFRAGVEVVAELTGLEQALIGADLVITGEGRFDAQTLRGKTPLGVARVAQRRQVPVI VLAGTLGDGYEQMYAHGIGAAFALVSGPMSLEQACRETRRLLHERARDVARLWQMASGG >Mature_379_residues MKIVIAPDSFKDSLSAQAVADAIASGLAEVWPHAELIKCPMADGGEGTIEALLAACNGELMSASVSGPLGAPVNAQWGWL ADSRTAIIEMAMASGLQLLTLAQRDACVTSTEGTGQLISAALDAGARRVILAIGGSATNDGGSGMLSALGARFLDADDQP LAPGGLALANLARIDLSGFDPRLSDVRVEIAADVDNPLCGPNGASSVFGPQKGASPEQVVALDAALGCFADQTAQVLGQD LRDSPGSGAAGGMGFAAKAYLKASFRAGVEVVAELTGLEQALIGADLVITGEGRFDAQTLRGKTPLGVARVAQRRQVPVI VLAGTLGDGYEQMYAHGIGAAFALVSGPMSLEQACRETRRLLHERARDVARLWQMASGG
Specific function: Unknown
COG id: COG1929
COG function: function code G; Glycerate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycerate kinase type-1 family [H]
Homologues:
Organism=Escherichia coli, GI145693185, Length=370, Percent_Identity=49.4594594594595, Blast_Score=335, Evalue=4e-93, Organism=Escherichia coli, GI1786724, Length=380, Percent_Identity=49.4736842105263, Blast_Score=315, Evalue=4e-87,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018193 - InterPro: IPR004381 [H]
Pfam domain/function: PF02595 Gly_kinase [H]
EC number: =2.7.1.31 [H]
Molecular weight: Translated: 38647; Mature: 38647
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIVIAPDSFKDSLSAQAVADAIASGLAEVWPHAELIKCPMADGGEGTIEALLAACNGEL CEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHEECCCCCCCCHHHHHHHHHHCCCC MSASVSGPLGAPVNAQWGWLADSRTAIIEMAMASGLQLLTLAQRDACVTSTEGTGQLISA EEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEHHHCCCEEECCCCCHHHHHH ALDAGARRVILAIGGSATNDGGSGMLSALGARFLDADDQPLAPGGLALANLARIDLSGFD HHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHEECCCCC PRLSDVRVEIAADVDNPLCGPNGASSVFGPQKGASPEQVVALDAALGCFADQTAQVLGQD CCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHEEEHHHHHHHHHHHHHHHHHHH LRDSPGSGAAGGMGFAAKAYLKASFRAGVEVVAELTGLEQALIGADLVITGEGRFDAQTL HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHH RGKTPLGVARVAQRRQVPVIVLAGTLGDGYEQMYAHGIGAAFALVSGPMSLEQACRETRR CCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LLHERARDVARLWQMASGG HHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKIVIAPDSFKDSLSAQAVADAIASGLAEVWPHAELIKCPMADGGEGTIEALLAACNGEL CEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHEECCCCCCCCHHHHHHHHHHCCCC MSASVSGPLGAPVNAQWGWLADSRTAIIEMAMASGLQLLTLAQRDACVTSTEGTGQLISA EEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEHHHCCCEEECCCCCHHHHHH ALDAGARRVILAIGGSATNDGGSGMLSALGARFLDADDQPLAPGGLALANLARIDLSGFD HHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHEECCCCC PRLSDVRVEIAADVDNPLCGPNGASSVFGPQKGASPEQVVALDAALGCFADQTAQVLGQD CCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHEEEHHHHHHHHHHHHHHHHHHH LRDSPGSGAAGGMGFAAKAYLKASFRAGVEVVAELTGLEQALIGADLVITGEGRFDAQTL HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHH RGKTPLGVARVAQRRQVPVIVLAGTLGDGYEQMYAHGIGAAFALVSGPMSLEQACRETRR CCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LLHERARDVARLWQMASGG HHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584049; 9384377; 3020045 [H]