| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66046311
Identifier: 66046311
GI number: 66046311
Start: 3687828
End: 3688676
Strand: Reverse
Name: 66046311
Synonym: Psyr_3082
Alternate gene names: NA
Gene position: 3688676-3687828 (Counterclockwise)
Preceding gene: 66046312
Following gene: 66046310
Centisome position: 60.53
GC content: 60.78
Gene sequence:
>849_bases ATGAGCCCTGCAATCTCTCGTACTCACCTGCGCTCTGCGCTGCTTAAACCTGTGCTGACCGTGTTGATCACCTCTGCGGC CATGACCCTGGCCGGTCAGGCCTGCGCGCAGGACAGCACTGCTCAAGGCCAATCGATGCTGGGTGACAGGTTCAACGTCA ATTTCGGACTCGGCATGGCCGTGCTGCCGCGCTACATGGGGGCTGATGAATACCGCAGTCAGGTGGTGCCCATGCTGACG GTCCAGCGTGGCATCTTCTTCGCCGACACCACGCGCGGTCTGGGGCTGCAATGGCAGTCGGATTCCGGGTTCGGTGCCAG CGCTGCACTCAATTACGATTTCGGTCGTACCGAGAAAAACAGTACGAATCGGCCTGGTTCCAACGAGCTGATAGGGATGG GTACCGTCAAGGGCGCGACCGTTGGCGACTTCATGGTTTCTCAGCAACTCATGCCGTGGCTGTCCGTCAGTGCCGAGGCC GAACTGCGGGTGGCTGGCGAACAACGTGGCAATCGCTATCGGTTGGGCTTCGAGGGCATCGCTTATCACAGCCAGACCGA CACGGTGACCCTCGACATTGATGCGCACGCCGGTGACGGTCGTTACAACCAGACCTATTTCGGCGTGAGTCCGATTCAGA GTCAGCGCACCGGCTTCTCCCGTTTCAACGCAGACAGCGGCATTTACGCGTACTCGGCGGCGCTCGCCTGGCAGCATACC TTCGACGCCCACTGGTCAACCGTCGCAAGCGTCGGGGTGACGCACTACACCGACCAGACCCGGGGCAGCCCGTTGGTCGA GACCGATGCCGAAGGCAGTGGCCTGATTGCCTTGAATTACGCTTTCTGA
Upstream 100 bases:
>100_bases CTCGATGCGCTGCAGCAAAACCGCATCGATGTGTTTCGAGTGCTGCACGGAGCAGAACCGACAACCCCACCCCAATCCTG AATGAAACCGGAGTATCCCC
Downstream 100 bases:
>100_bases AGGGTTGAAGCCTGCCATGCGATTGAATCCTGATGCGTTTCCTGCTCTACGGCGGTGTGTGTCACGCGCTTGCGGCGTCG TACTGATCACTCTGATGATC
Product: MltA-interacting MipA
Products: NA
Alternate protein names: MipA Family Protein; MltA-Interacting MipA; Outer Membrane Protein; MltA-Interacting Protein MipA; Outer Membrane Lytic Transglycosylase MltA-Interacting MipA; Conserved Protein; MipA Family MltA-Interacting Protein; Outer Membrane Protein Yiat; Exported Protein
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MSPAISRTHLRSALLKPVLTVLITSAAMTLAGQACAQDSTAQGQSMLGDRFNVNFGLGMAVLPRYMGADEYRSQVVPMLT VQRGIFFADTTRGLGLQWQSDSGFGASAALNYDFGRTEKNSTNRPGSNELIGMGTVKGATVGDFMVSQQLMPWLSVSAEA ELRVAGEQRGNRYRLGFEGIAYHSQTDTVTLDIDAHAGDGRYNQTYFGVSPIQSQRTGFSRFNADSGIYAYSAALAWQHT FDAHWSTVASVGVTHYTDQTRGSPLVETDAEGSGLIALNYAF
Sequences:
>Translated_282_residues MSPAISRTHLRSALLKPVLTVLITSAAMTLAGQACAQDSTAQGQSMLGDRFNVNFGLGMAVLPRYMGADEYRSQVVPMLT VQRGIFFADTTRGLGLQWQSDSGFGASAALNYDFGRTEKNSTNRPGSNELIGMGTVKGATVGDFMVSQQLMPWLSVSAEA ELRVAGEQRGNRYRLGFEGIAYHSQTDTVTLDIDAHAGDGRYNQTYFGVSPIQSQRTGFSRFNADSGIYAYSAALAWQHT FDAHWSTVASVGVTHYTDQTRGSPLVETDAEGSGLIALNYAF >Mature_281_residues SPAISRTHLRSALLKPVLTVLITSAAMTLAGQACAQDSTAQGQSMLGDRFNVNFGLGMAVLPRYMGADEYRSQVVPMLTV QRGIFFADTTRGLGLQWQSDSGFGASAALNYDFGRTEKNSTNRPGSNELIGMGTVKGATVGDFMVSQQLMPWLSVSAEAE LRVAGEQRGNRYRLGFEGIAYHSQTDTVTLDIDAHAGDGRYNQTYFGVSPIQSQRTGFSRFNADSGIYAYSAALAWQHTF DAHWSTVASVGVTHYTDQTRGSPLVETDAEGSGLIALNYAF
Specific function: Unknown
COG id: COG3713
COG function: function code M; Outer membrane protein V
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30425; Mature: 30294
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPAISRTHLRSALLKPVLTVLITSAAMTLAGQACAQDSTAQGQSMLGDRFNVNFGLGMA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCEEEECCCHHH VLPRYMGADEYRSQVVPMLTVQRGIFFADTTRGLGLQWQSDSGFGASAALNYDFGRTEKN HHHHHCCCHHHHHHCCCEEECCCCEEEEECCCCCCEEECCCCCCCCEEEEECCCCCCCCC STNRPGSNELIGMGTVKGATVGDFMVSQQLMPWLSVSAEAELRVAGEQRGNRYRLGFEGI CCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEECCEE AYHSQTDTVTLDIDAHAGDGRYNQTYFGVSPIQSQRTGFSRFNADSGIYAYSAALAWQHT EEECCCCEEEEEEECCCCCCCCCCEEECCCCCCHHHCCCHHCCCCCCEEEEEEHHHHHHH FDAHWSTVASVGVTHYTDQTRGSPLVETDAEGSGLIALNYAF HHHHHHHHHHHCCEEECCCCCCCCCEEECCCCCCEEEEEECC >Mature Secondary Structure SPAISRTHLRSALLKPVLTVLITSAAMTLAGQACAQDSTAQGQSMLGDRFNVNFGLGMA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCEEEECCCHHH VLPRYMGADEYRSQVVPMLTVQRGIFFADTTRGLGLQWQSDSGFGASAALNYDFGRTEKN HHHHHCCCHHHHHHCCCEEECCCCEEEEECCCCCCEEECCCCCCCCEEEEECCCCCCCCC STNRPGSNELIGMGTVKGATVGDFMVSQQLMPWLSVSAEAELRVAGEQRGNRYRLGFEGI CCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEECCEE AYHSQTDTVTLDIDAHAGDGRYNQTYFGVSPIQSQRTGFSRFNADSGIYAYSAALAWQHT EEECCCCEEEEEEECCCCCCCCCCEEECCCCCCHHHCCCHHCCCCCCEEEEEEHHHHHHH FDAHWSTVASVGVTHYTDQTRGSPLVETDAEGSGLIALNYAF HHHHHHHHHHHCCEEECCCCCCCCCEEECCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA