Definition Pseudomonas syringae pv. syringae B728a, complete genome.
Accession NC_007005
Length 6,093,698

Click here to switch to the map view.

The map label for this gene is 66046311

Identifier: 66046311

GI number: 66046311

Start: 3687828

End: 3688676

Strand: Reverse

Name: 66046311

Synonym: Psyr_3082

Alternate gene names: NA

Gene position: 3688676-3687828 (Counterclockwise)

Preceding gene: 66046312

Following gene: 66046310

Centisome position: 60.53

GC content: 60.78

Gene sequence:

>849_bases
ATGAGCCCTGCAATCTCTCGTACTCACCTGCGCTCTGCGCTGCTTAAACCTGTGCTGACCGTGTTGATCACCTCTGCGGC
CATGACCCTGGCCGGTCAGGCCTGCGCGCAGGACAGCACTGCTCAAGGCCAATCGATGCTGGGTGACAGGTTCAACGTCA
ATTTCGGACTCGGCATGGCCGTGCTGCCGCGCTACATGGGGGCTGATGAATACCGCAGTCAGGTGGTGCCCATGCTGACG
GTCCAGCGTGGCATCTTCTTCGCCGACACCACGCGCGGTCTGGGGCTGCAATGGCAGTCGGATTCCGGGTTCGGTGCCAG
CGCTGCACTCAATTACGATTTCGGTCGTACCGAGAAAAACAGTACGAATCGGCCTGGTTCCAACGAGCTGATAGGGATGG
GTACCGTCAAGGGCGCGACCGTTGGCGACTTCATGGTTTCTCAGCAACTCATGCCGTGGCTGTCCGTCAGTGCCGAGGCC
GAACTGCGGGTGGCTGGCGAACAACGTGGCAATCGCTATCGGTTGGGCTTCGAGGGCATCGCTTATCACAGCCAGACCGA
CACGGTGACCCTCGACATTGATGCGCACGCCGGTGACGGTCGTTACAACCAGACCTATTTCGGCGTGAGTCCGATTCAGA
GTCAGCGCACCGGCTTCTCCCGTTTCAACGCAGACAGCGGCATTTACGCGTACTCGGCGGCGCTCGCCTGGCAGCATACC
TTCGACGCCCACTGGTCAACCGTCGCAAGCGTCGGGGTGACGCACTACACCGACCAGACCCGGGGCAGCCCGTTGGTCGA
GACCGATGCCGAAGGCAGTGGCCTGATTGCCTTGAATTACGCTTTCTGA

Upstream 100 bases:

>100_bases
CTCGATGCGCTGCAGCAAAACCGCATCGATGTGTTTCGAGTGCTGCACGGAGCAGAACCGACAACCCCACCCCAATCCTG
AATGAAACCGGAGTATCCCC

Downstream 100 bases:

>100_bases
AGGGTTGAAGCCTGCCATGCGATTGAATCCTGATGCGTTTCCTGCTCTACGGCGGTGTGTGTCACGCGCTTGCGGCGTCG
TACTGATCACTCTGATGATC

Product: MltA-interacting MipA

Products: NA

Alternate protein names: MipA Family Protein; MltA-Interacting MipA; Outer Membrane Protein; MltA-Interacting Protein MipA; Outer Membrane Lytic Transglycosylase MltA-Interacting MipA; Conserved Protein; MipA Family MltA-Interacting Protein; Outer Membrane Protein Yiat; Exported Protein

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MSPAISRTHLRSALLKPVLTVLITSAAMTLAGQACAQDSTAQGQSMLGDRFNVNFGLGMAVLPRYMGADEYRSQVVPMLT
VQRGIFFADTTRGLGLQWQSDSGFGASAALNYDFGRTEKNSTNRPGSNELIGMGTVKGATVGDFMVSQQLMPWLSVSAEA
ELRVAGEQRGNRYRLGFEGIAYHSQTDTVTLDIDAHAGDGRYNQTYFGVSPIQSQRTGFSRFNADSGIYAYSAALAWQHT
FDAHWSTVASVGVTHYTDQTRGSPLVETDAEGSGLIALNYAF

Sequences:

>Translated_282_residues
MSPAISRTHLRSALLKPVLTVLITSAAMTLAGQACAQDSTAQGQSMLGDRFNVNFGLGMAVLPRYMGADEYRSQVVPMLT
VQRGIFFADTTRGLGLQWQSDSGFGASAALNYDFGRTEKNSTNRPGSNELIGMGTVKGATVGDFMVSQQLMPWLSVSAEA
ELRVAGEQRGNRYRLGFEGIAYHSQTDTVTLDIDAHAGDGRYNQTYFGVSPIQSQRTGFSRFNADSGIYAYSAALAWQHT
FDAHWSTVASVGVTHYTDQTRGSPLVETDAEGSGLIALNYAF
>Mature_281_residues
SPAISRTHLRSALLKPVLTVLITSAAMTLAGQACAQDSTAQGQSMLGDRFNVNFGLGMAVLPRYMGADEYRSQVVPMLTV
QRGIFFADTTRGLGLQWQSDSGFGASAALNYDFGRTEKNSTNRPGSNELIGMGTVKGATVGDFMVSQQLMPWLSVSAEAE
LRVAGEQRGNRYRLGFEGIAYHSQTDTVTLDIDAHAGDGRYNQTYFGVSPIQSQRTGFSRFNADSGIYAYSAALAWQHTF
DAHWSTVASVGVTHYTDQTRGSPLVETDAEGSGLIALNYAF

Specific function: Unknown

COG id: COG3713

COG function: function code M; Outer membrane protein V

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30425; Mature: 30294

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPAISRTHLRSALLKPVLTVLITSAAMTLAGQACAQDSTAQGQSMLGDRFNVNFGLGMA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCEEEECCCHHH
VLPRYMGADEYRSQVVPMLTVQRGIFFADTTRGLGLQWQSDSGFGASAALNYDFGRTEKN
HHHHHCCCHHHHHHCCCEEECCCCEEEEECCCCCCEEECCCCCCCCEEEEECCCCCCCCC
STNRPGSNELIGMGTVKGATVGDFMVSQQLMPWLSVSAEAELRVAGEQRGNRYRLGFEGI
CCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEECCEE
AYHSQTDTVTLDIDAHAGDGRYNQTYFGVSPIQSQRTGFSRFNADSGIYAYSAALAWQHT
EEECCCCEEEEEEECCCCCCCCCCEEECCCCCCHHHCCCHHCCCCCCEEEEEEHHHHHHH
FDAHWSTVASVGVTHYTDQTRGSPLVETDAEGSGLIALNYAF
HHHHHHHHHHHCCEEECCCCCCCCCEEECCCCCCEEEEEECC
>Mature Secondary Structure 
SPAISRTHLRSALLKPVLTVLITSAAMTLAGQACAQDSTAQGQSMLGDRFNVNFGLGMA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCEEEECCCHHH
VLPRYMGADEYRSQVVPMLTVQRGIFFADTTRGLGLQWQSDSGFGASAALNYDFGRTEKN
HHHHHCCCHHHHHHCCCEEECCCCEEEEECCCCCCEEECCCCCCCCEEEEECCCCCCCCC
STNRPGSNELIGMGTVKGATVGDFMVSQQLMPWLSVSAEAELRVAGEQRGNRYRLGFEGI
CCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEECCEE
AYHSQTDTVTLDIDAHAGDGRYNQTYFGVSPIQSQRTGFSRFNADSGIYAYSAALAWQHT
EEECCCCEEEEEEECCCCCCCCCCEEECCCCCCHHHCCCHHCCCCCCEEEEEEHHHHHHH
FDAHWSTVASVGVTHYTDQTRGSPLVETDAEGSGLIALNYAF
HHHHHHHHHHHCCEEECCCCCCCCCEEECCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA