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The map label for this gene is atoS [C]

Identifier: 66046291

GI number: 66046291

Start: 3659376

End: 3660704

Strand: Direct

Name: atoS [C]

Synonym: Psyr_3060

Alternate gene names: 66046291

Gene position: 3659376-3660704 (Clockwise)

Preceding gene: 66046282

Following gene: 66046294

Centisome position: 60.05

GC content: 61.32

Gene sequence:

>1329_bases
ATGACCCACCACCCTGCGCCACTTCCCGCCAGCGAGGAAGAACGTGTCCTGTCCCTTGAGCATCTCAAGATACTGGACAG
TGCTCCCGAGCAAGACTTCGACGACATTGTGCTGCTCGCCACAACACTGTGCGACGCGCCCATTGCGCTGGTCTCGCTGG
TTGACCGAGAACGCCAGTGGTTCAAGGCCTGCATCGGCCTGGACGTGCAGGAGACGCATCGCGACCTGGCATTCTGCGCC
CACGCCATCCTGCAGCCTTCCGATGTGCTGGTGGTTGAAGACGCGACCACCGATCCTCGCTTCAGAGAGAGCCCGCTGGT
GCTGGGGCCTCCCTACATCCGCTTTTATGCGGGTGCGCCGATTCGTACCGAGGCCGGCCATGCACTGGGCACCGTCTGCG
TGATCGATATCTGGCCGCGCGTACTGAGCGACCAGCAACGTCGTGCCCTGCTGGCACTGGCGCGGCAAACCGCAGCCCTG
ATGCAATACCGCCTGGTTTCGGAGCAGCGTGACCAGCACGCCGCCGAACTGGCACTGGGACTCGAAAGCGCACAGAGCCA
AAGCCTGGCGCTGGAGCGCAACCTGCGCCAGTCGCAACGGGTGTCGTCGCTGGGCATGCTCACGGCGAGCATCGCTCATG
ACTTCAATAACCTGCTCCAGGCACTGAGCGCCAGCCTGCAACTGATTCGCATGCGCTCACGCCGTCCGACCGACGTCGAG
ACGCTCAGCGATACCGGACTGCGAGCGGTGGATCACGGTCGCCAACTGGTGACTCGCCTGCTCAACAGCGTTCGCCAGGA
CGGTTCCGAACTGATCTGCATCGATGTCAGCGAACGGATCGATGCCGCGCGTGATCTTCTGTTGCGTTCGGCGGGCGACA
CGCTGGAGCTGTCATTCGACCTATCCGCCCGAGGCTGGGGCGTGTTGTGCGCCGAAGCGCAATTGCATACCACCTTGTTG
AATCTGCTGAGCAATGCGCGTGATGCAATTTCAGGCCCCGGCAAGGTGCATATCTCGACCCGGCTGGAGTCCGTCAAGGA
CGACCCGCAATTCCCGGAAGGCGATTATCTGGTACTCAGCGTGAAAGATAACGGTCCTGGCATGACCGCCGAGCTCAAGG
AGCAGATGTTCGAACCCTTCTTCACAACCCGAAGTTCGGACCCTGGTGCCGGGCTTGGCCTTGTCCAGGTGCAGGAGTTT
GCGGTAAATGCCGGCGGAGGCGCACGCGTCGAAACAGCACTTGGAAGCGGCACTACCGTGCATCTCTACTTGAGAATACT
GGGGCCGATCAGTGCAACTAACGCACCAGCCCATATAACCGAACAATAA

Upstream 100 bases:

>100_bases
GACACCGGCACGCCGAGCTGATTTATGCAGCGTATGCCTTGCTGCGCTCTATGGATCATAGGCATCATAAGACCTATTTC
ATCCGATCGCGGTGCGCCCC

Downstream 100 bases:

>100_bases
CAACGGCTCATCGCCAGCGAGGCGTGGTTACTTCAGATACCCGTTAAATACCCGTTAAATAGAAATGGCCGAACATTCAC
TGTTCGGCTTTTTTATTTTC

Product: GAF:ATP-binding region, ATPase-like:histidine kinase A, N-terminal

Products: NA

Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]

Number of amino acids: Translated: 442; Mature: 441

Protein sequence:

>442_residues
MTHHPAPLPASEEERVLSLEHLKILDSAPEQDFDDIVLLATTLCDAPIALVSLVDRERQWFKACIGLDVQETHRDLAFCA
HAILQPSDVLVVEDATTDPRFRESPLVLGPPYIRFYAGAPIRTEAGHALGTVCVIDIWPRVLSDQQRRALLALARQTAAL
MQYRLVSEQRDQHAAELALGLESAQSQSLALERNLRQSQRVSSLGMLTASIAHDFNNLLQALSASLQLIRMRSRRPTDVE
TLSDTGLRAVDHGRQLVTRLLNSVRQDGSELICIDVSERIDAARDLLLRSAGDTLELSFDLSARGWGVLCAEAQLHTTLL
NLLSNARDAISGPGKVHISTRLESVKDDPQFPEGDYLVLSVKDNGPGMTAELKEQMFEPFFTTRSSDPGAGLGLVQVQEF
AVNAGGGARVETALGSGTTVHLYLRILGPISATNAPAHITEQ

Sequences:

>Translated_442_residues
MTHHPAPLPASEEERVLSLEHLKILDSAPEQDFDDIVLLATTLCDAPIALVSLVDRERQWFKACIGLDVQETHRDLAFCA
HAILQPSDVLVVEDATTDPRFRESPLVLGPPYIRFYAGAPIRTEAGHALGTVCVIDIWPRVLSDQQRRALLALARQTAAL
MQYRLVSEQRDQHAAELALGLESAQSQSLALERNLRQSQRVSSLGMLTASIAHDFNNLLQALSASLQLIRMRSRRPTDVE
TLSDTGLRAVDHGRQLVTRLLNSVRQDGSELICIDVSERIDAARDLLLRSAGDTLELSFDLSARGWGVLCAEAQLHTTLL
NLLSNARDAISGPGKVHISTRLESVKDDPQFPEGDYLVLSVKDNGPGMTAELKEQMFEPFFTTRSSDPGAGLGLVQVQEF
AVNAGGGARVETALGSGTTVHLYLRILGPISATNAPAHITEQ
>Mature_441_residues
THHPAPLPASEEERVLSLEHLKILDSAPEQDFDDIVLLATTLCDAPIALVSLVDRERQWFKACIGLDVQETHRDLAFCAH
AILQPSDVLVVEDATTDPRFRESPLVLGPPYIRFYAGAPIRTEAGHALGTVCVIDIWPRVLSDQQRRALLALARQTAALM
QYRLVSEQRDQHAAELALGLESAQSQSLALERNLRQSQRVSSLGMLTASIAHDFNNLLQALSASLQLIRMRSRRPTDVET
LSDTGLRAVDHGRQLVTRLLNSVRQDGSELICIDVSERIDAARDLLLRSAGDTLELSFDLSARGWGVLCAEAQLHTTLLN
LLSNARDAISGPGKVHISTRLESVKDDPQFPEGDYLVLSVKDNGPGMTAELKEQMFEPFFTTRSSDPGAGLGLVQVQEFA
VNAGGGARVETALGSGTTVHLYLRILGPISATNAPAHITEQ

Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788549, Length=237, Percent_Identity=31.2236286919831, Blast_Score=92, Evalue=6e-20,
Organism=Escherichia coli, GI1790436, Length=244, Percent_Identity=25, Blast_Score=72, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR011006
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082
- InterPro:   IPR001789 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 48245; Mature: 48114

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHHPAPLPASEEERVLSLEHLKILDSAPEQDFDDIVLLATTLCDAPIALVSLVDRERQW
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH
FKACIGLDVQETHRDLAFCAHAILQPSDVLVVEDATTDPRFRESPLVLGPPYIRFYAGAP
HHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEECCCCEEEECCCC
IRTEAGHALGTVCVIDIWPRVLSDQQRRALLALARQTAALMQYRLVSEQRDQHAAELALG
CCCCCCCHHHHHHHEEHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LESAQSQSLALERNLRQSQRVSSLGMLTASIAHDFNNLLQALSASLQLIRMRSRRPTDVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
TLSDTGLRAVDHGRQLVTRLLNSVRQDGSELICIDVSERIDAARDLLLRSAGDTLELSFD
HHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHCCCCEEEEEEE
LSARGWGVLCAEAQLHTTLLNLLSNARDAISGPGKVHISTRLESVKDDPQFPEGDYLVLS
CCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCCCCCCCCCEEEEE
VKDNGPGMTAELKEQMFEPFFTTRSSDPGAGLGLVQVQEFAVNAGGGARVETALGSGTTV
EECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHEEHHEECCCCCEEEEECCCCCEE
HLYLRILGPISATNAPAHITEQ
EEEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure 
THHPAPLPASEEERVLSLEHLKILDSAPEQDFDDIVLLATTLCDAPIALVSLVDRERQW
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH
FKACIGLDVQETHRDLAFCAHAILQPSDVLVVEDATTDPRFRESPLVLGPPYIRFYAGAP
HHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEECCCCEEEECCCC
IRTEAGHALGTVCVIDIWPRVLSDQQRRALLALARQTAALMQYRLVSEQRDQHAAELALG
CCCCCCCHHHHHHHEEHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LESAQSQSLALERNLRQSQRVSSLGMLTASIAHDFNNLLQALSASLQLIRMRSRRPTDVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
TLSDTGLRAVDHGRQLVTRLLNSVRQDGSELICIDVSERIDAARDLLLRSAGDTLELSFD
HHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHCCCCEEEEEEE
LSARGWGVLCAEAQLHTTLLNLLSNARDAISGPGKVHISTRLESVKDDPQFPEGDYLVLS
CCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCCCCCCCCCEEEEE
VKDNGPGMTAELKEQMFEPFFTTRSSDPGAGLGLVQVQEFAVNAGGGARVETALGSGTTV
EECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHEEHHEECCCCCEEEEECCCCCEE
HLYLRILGPISATNAPAHITEQ
EEEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA