| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66046285
Identifier: 66046285
GI number: 66046285
Start: 3651609
End: 3652544
Strand: Reverse
Name: 66046285
Synonym: Psyr_3054
Alternate gene names: NA
Gene position: 3652544-3651609 (Counterclockwise)
Preceding gene: 66046286
Following gene: 66046284
Centisome position: 59.94
GC content: 59.19
Gene sequence:
>936_bases ATGAAAACGTTAGGGCAGTCGGTCAGTACCCAGGAGCGACAACTGGAAGCCGCCGTGCGCAGCATCGACAGCTGGCAGGG CCGCCGCGTTGACTACGAGCCTGTCAGTGGTGGCATTTCCAACACCAACTGGCGGGTCGAGGTCGAGGGTGCCGACACAG CGTACTTCTTCAAGGTGCCAGGCGTCGGTACAGAGATGTTCATTGATCGTCACACTGCTCACGAGGCCAGTGTGAAAGCT GCGCAAACCGGTTATGGCGCGCCGGTTTTCGCCTTTCTCGAAGCCTTCGGTGTCGAGGTGTTCGAATTCATGGAGGGCTG GCGGGCGTCGTCCAACCATGACTTCCTGCAACGCGACATACGCCACAGTGCCCTGCGCGGGCTCAAGGCGTTCAACGATC AGCCGCTGCTGCAACAGACCAAGACCGTGTTCGACATGATCACCGAGCACCAGAGCCAGGTGGCCGAACTCAAGGGCATC AAGCCTCAGGATGACGACTGGCTGTGCCTGCAATACCAGCGCGCAAAAGCTGCGCTGCAAGCTTCCGGGATCGATCTGGC GCCGTGCATGAACGACACGCTGGCAGGCAATTTCATGCTCAACGCGGATCGCCAGATTCGTCTGGTGGATTTCGAGTACG CCTCCAACAACGACCGCCATTACGAATTGGCGCTGTGGTTCGGCGAGATGTTTTTCAGCGACGACATGGAGCTGGCGCTG ATCGAGGACTACTTCGGCCAGGTCAGCGCGCAAACCGTAGCGCGGATCAAGCTCAACAAGGCCTTGGCCGACATCAAATG GTCGACCTGGGCGATGGTGCAGCACGCGGTGTCGCAACTGGACTTCGACTTTTACAAGTACGGCGCCTGGAAACACATGC GGGCGCGCAGCATCATCAATGATTCGCAATGGGAAACCTGGCTGCGGCAGGCCTGA
Upstream 100 bases:
>100_bases AGTTTTCCAAGGTCGGGCAATGGACGCTGCTGCGGTGTCGGCAGTGCGTTCAGGACCCGCGGCTGGAAGGCTGGATGCGT CAGGTTCAGGAGGGTAGAGC
Downstream 100 bases:
>100_bases GTCGATCTCGTCCGGCGCGCCTTTGAACATTCAAGGCAAGTATTTCAATAATAAAAAAGTAGCGGGTAACCGCGTGTTTC TTTCACTGCTTGAGTTTTAT
Product: choline/ethanolamine kinase:aminoglycoside phosphotransferase
Products: NA
Alternate protein names: Aminoglycoside Phosphotransferase; Choline Kinase; Choline/Ethanolamine Kinase Family Protein; Ethanolamine Kinase; Choline Kinase Involved In LPS Biosynthesis-Like Protein; Aminoglycoside Phosphotransferase Family Protein
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MKTLGQSVSTQERQLEAAVRSIDSWQGRRVDYEPVSGGISNTNWRVEVEGADTAYFFKVPGVGTEMFIDRHTAHEASVKA AQTGYGAPVFAFLEAFGVEVFEFMEGWRASSNHDFLQRDIRHSALRGLKAFNDQPLLQQTKTVFDMITEHQSQVAELKGI KPQDDDWLCLQYQRAKAALQASGIDLAPCMNDTLAGNFMLNADRQIRLVDFEYASNNDRHYELALWFGEMFFSDDMELAL IEDYFGQVSAQTVARIKLNKALADIKWSTWAMVQHAVSQLDFDFYKYGAWKHMRARSIINDSQWETWLRQA
Sequences:
>Translated_311_residues MKTLGQSVSTQERQLEAAVRSIDSWQGRRVDYEPVSGGISNTNWRVEVEGADTAYFFKVPGVGTEMFIDRHTAHEASVKA AQTGYGAPVFAFLEAFGVEVFEFMEGWRASSNHDFLQRDIRHSALRGLKAFNDQPLLQQTKTVFDMITEHQSQVAELKGI KPQDDDWLCLQYQRAKAALQASGIDLAPCMNDTLAGNFMLNADRQIRLVDFEYASNNDRHYELALWFGEMFFSDDMELAL IEDYFGQVSAQTVARIKLNKALADIKWSTWAMVQHAVSQLDFDFYKYGAWKHMRARSIINDSQWETWLRQA >Mature_311_residues MKTLGQSVSTQERQLEAAVRSIDSWQGRRVDYEPVSGGISNTNWRVEVEGADTAYFFKVPGVGTEMFIDRHTAHEASVKA AQTGYGAPVFAFLEAFGVEVFEFMEGWRASSNHDFLQRDIRHSALRGLKAFNDQPLLQQTKTVFDMITEHQSQVAELKGI KPQDDDWLCLQYQRAKAALQASGIDLAPCMNDTLAGNFMLNADRQIRLVDFEYASNNDRHYELALWFGEMFFSDDMELAL IEDYFGQVSAQTVARIKLNKALADIKWSTWAMVQHAVSQLDFDFYKYGAWKHMRARSIINDSQWETWLRQA
Specific function: Unknown
COG id: COG0510
COG function: function code M; Predicted choline kinase involved in LPS biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35579; Mature: 35579
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLGQSVSTQERQLEAAVRSIDSWQGRRVDYEPVSGGISNTNWRVEVEGADTAYFFKVP CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECC GVGTEMFIDRHTAHEASVKAAQTGYGAPVFAFLEAFGVEVFEFMEGWRASSNHDFLQRDI CCCHHHHEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH RHSALRGLKAFNDQPLLQQTKTVFDMITEHQSQVAELKGIKPQDDDWLCLQYQRAKAALQ HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHH ASGIDLAPCMNDTLAGNFMLNADRQIRLVDFEYASNNDRHYELALWFGEMFFSDDMELAL HCCCEECCCCCCCCCCCEEECCCCEEEEEEEEECCCCCCEEEEEEEEEHHHHCCCCCEEH IEDYFGQVSAQTVARIKLNKALADIKWSTWAMVQHAVSQLDFDFYKYGAWKHMRARSIIN HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHCC DSQWETWLRQA CHHHHHHHHCC >Mature Secondary Structure MKTLGQSVSTQERQLEAAVRSIDSWQGRRVDYEPVSGGISNTNWRVEVEGADTAYFFKVP CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECC GVGTEMFIDRHTAHEASVKAAQTGYGAPVFAFLEAFGVEVFEFMEGWRASSNHDFLQRDI CCCHHHHEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH RHSALRGLKAFNDQPLLQQTKTVFDMITEHQSQVAELKGIKPQDDDWLCLQYQRAKAALQ HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHH ASGIDLAPCMNDTLAGNFMLNADRQIRLVDFEYASNNDRHYELALWFGEMFFSDDMELAL HCCCEECCCCCCCCCCCEEECCCCEEEEEEEEECCCCCCEEEEEEEEEHHHHCCCCCEEH IEDYFGQVSAQTVARIKLNKALADIKWSTWAMVQHAVSQLDFDFYKYGAWKHMRARSIIN HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHCC DSQWETWLRQA CHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA