| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66046286
Identifier: 66046286
GI number: 66046286
Start: 3652541
End: 3653494
Strand: Reverse
Name: 66046286
Synonym: Psyr_3055
Alternate gene names: NA
Gene position: 3653494-3652541 (Counterclockwise)
Preceding gene: 66046287
Following gene: 66046285
Centisome position: 59.96
GC content: 63.63
Gene sequence:
>954_bases ATGTCATATGCCGACGACTTGACCACACGCCTGCGCAGCGCATTGACATCTTGCGGGTTCGCGGCAGACGCCGGGATCGA GAACGTTACCCAGGGCGTGGCTTCGCCCTCGAGATTGTCGACCGAGTGGGCCGGCTTTCGGGTCAGCAGCGCGCAGGGCG CTTGCTACGTCAAGGTTCTGCATGCCGACATGGCGCCACTGATCGATTTCGATAACGTAGCCCAGGCCAGCGAATGTGCC GGCCGTAGCGCTGCTGCACCACGGCTCCTTGGCGCAGACCAGGCCAATGGCGTGCTGATCTTCGAGGACCTGGGTGTCGA CTGGCGAGCTGCGCGGCTCGACGATCTGCTCGCACCCGGCCGGCTTCAGGCACTGTGGGCACTCAAGCGGCAGGTGCATG CCGGGCCGGTGCCTGATGTGGTGCGCTCGCCAATGGCGGACATCGAGCGCCTGCGCGCAGTGTGCGAACGCGACAACGTT GCGCTGCCTGCCGAGCATCAATGGATCGACCGTTGCGTCGACATGGCCTGGCAGTCGCTGCAGAGCCGATCCGTGCAAGC GGTTCCGCTGCACGGCGACGGTGTGTCGAGCAACGTCATGGTGTCCAGCGAAGGTCAGTTGCGTCTGGTGGATTTTGACT ACGGTGGCTGCATGGACCCGTGGTACGACGTGGCGATTACCCTCAACGAGCTTTATTCGTTCGAGCGCCAGTGGCGCGAA GGAATCGGCGCGTGGGCCGGGCAATGCCTGGAAATCGACTACGCCGTGTGCCGTCTGTATGCGCTGATCAACGACTGGTA CTGGACATTGTGGGGGCTTTGGGCCGGTACCACGTCCTCGCGGCCACTGGAGTTTTCCAAGGTCGGGCAATGGACGCTGC TGCGGTGTCGGCAGTGCGTTCAGGACCCGCGGCTGGAAGGCTGGATGCGTCAGGTTCAGGAGGGTAGAGCATGA
Upstream 100 bases:
>100_bases TACACCAGCGATCAGGACATGCACAACGGTTTGCGCATGCTGACCGGTCTTTTGCATCGGGCTTGCACCTCATCTGCGTC ATTTGGTTGAGGGGCTGACC
Downstream 100 bases:
>100_bases AAACGTTAGGGCAGTCGGTCAGTACCCAGGAGCGACAACTGGAAGCCGCCGTGCGCAGCATCGACAGCTGGCAGGGCCGC CGCGTTGACTACGAGCCTGT
Product: aminoglycoside phosphotransferase
Products: NA
Alternate protein names: Choline/Ethanolamine Kinase; Choline Kinase; Ethanolamine Kinase
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MSYADDLTTRLRSALTSCGFAADAGIENVTQGVASPSRLSTEWAGFRVSSAQGACYVKVLHADMAPLIDFDNVAQASECA GRSAAAPRLLGADQANGVLIFEDLGVDWRAARLDDLLAPGRLQALWALKRQVHAGPVPDVVRSPMADIERLRAVCERDNV ALPAEHQWIDRCVDMAWQSLQSRSVQAVPLHGDGVSSNVMVSSEGQLRLVDFDYGGCMDPWYDVAITLNELYSFERQWRE GIGAWAGQCLEIDYAVCRLYALINDWYWTLWGLWAGTTSSRPLEFSKVGQWTLLRCRQCVQDPRLEGWMRQVQEGRA
Sequences:
>Translated_317_residues MSYADDLTTRLRSALTSCGFAADAGIENVTQGVASPSRLSTEWAGFRVSSAQGACYVKVLHADMAPLIDFDNVAQASECA GRSAAAPRLLGADQANGVLIFEDLGVDWRAARLDDLLAPGRLQALWALKRQVHAGPVPDVVRSPMADIERLRAVCERDNV ALPAEHQWIDRCVDMAWQSLQSRSVQAVPLHGDGVSSNVMVSSEGQLRLVDFDYGGCMDPWYDVAITLNELYSFERQWRE GIGAWAGQCLEIDYAVCRLYALINDWYWTLWGLWAGTTSSRPLEFSKVGQWTLLRCRQCVQDPRLEGWMRQVQEGRA >Mature_316_residues SYADDLTTRLRSALTSCGFAADAGIENVTQGVASPSRLSTEWAGFRVSSAQGACYVKVLHADMAPLIDFDNVAQASECAG RSAAAPRLLGADQANGVLIFEDLGVDWRAARLDDLLAPGRLQALWALKRQVHAGPVPDVVRSPMADIERLRAVCERDNVA LPAEHQWIDRCVDMAWQSLQSRSVQAVPLHGDGVSSNVMVSSEGQLRLVDFDYGGCMDPWYDVAITLNELYSFERQWREG IGAWAGQCLEIDYAVCRLYALINDWYWTLWGLWAGTTSSRPLEFSKVGQWTLLRCRQCVQDPRLEGWMRQVQEGRA
Specific function: Unknown
COG id: COG0510
COG function: function code M; Predicted choline kinase involved in LPS biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35201; Mature: 35070
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYADDLTTRLRSALTSCGFAADAGIENVTQGVASPSRLSTEWAGFRVSSAQGACYVKVL CCCHHHHHHHHHHHHHHCCCHHHCCHHHHHHHCCCCHHHCHHHCCEEEECCCCCEEEEEE HADMAPLIDFDNVAQASECAGRSAAAPRLLGADQANGVLIFEDLGVDWRAARLDDLLAPG HHCHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCH RLQALWALKRQVHAGPVPDVVRSPMADIERLRAVCERDNVALPAEHQWIDRCVDMAWQSL HHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH QSRSVQAVPLHGDGVSSNVMVSSEGQLRLVDFDYGGCMDPWYDVAITLNELYSFERQWRE HHCCCEEEEECCCCCCCCEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH GIGAWAGQCLEIDYAVCRLYALINDWYWTLWGLWAGTTSSRPLEFSKVGQWTLLRCRQCV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHH QDPRLEGWMRQVQEGRA CCCCHHHHHHHHHHCCC >Mature Secondary Structure SYADDLTTRLRSALTSCGFAADAGIENVTQGVASPSRLSTEWAGFRVSSAQGACYVKVL CCHHHHHHHHHHHHHHCCCHHHCCHHHHHHHCCCCHHHCHHHCCEEEECCCCCEEEEEE HADMAPLIDFDNVAQASECAGRSAAAPRLLGADQANGVLIFEDLGVDWRAARLDDLLAPG HHCHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCH RLQALWALKRQVHAGPVPDVVRSPMADIERLRAVCERDNVALPAEHQWIDRCVDMAWQSL HHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH QSRSVQAVPLHGDGVSSNVMVSSEGQLRLVDFDYGGCMDPWYDVAITLNELYSFERQWRE HHCCCEEEEECCCCCCCCEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH GIGAWAGQCLEIDYAVCRLYALINDWYWTLWGLWAGTTSSRPLEFSKVGQWTLLRCRQCV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHH QDPRLEGWMRQVQEGRA CCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA