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The map label for this gene is yecS [C]

Identifier: 66046194

GI number: 66046194

Start: 3551947

End: 3552624

Strand: Direct

Name: yecS [C]

Synonym: Psyr_2963

Alternate gene names: 66046194

Gene position: 3551947-3552624 (Clockwise)

Preceding gene: 66046193

Following gene: 66046195

Centisome position: 58.29

GC content: 61.21

Gene sequence:

>678_bases
ATGCCTGTTGATGCCGCAACACTGGAAACCGCAGGCTTCATTGCCAGACAACTGGCCCACGGCGCCTGGATCACCCTGCA
GATCACCGTGCTTGCCGAACTGCTGGTGCTGGTGCTCTCGTTTGTAATCGCCCTGATGCGCCTGTCGCCGTTCAGGGCGC
TACGCTGGTTCGCTACTGTGTATGTCGAGGTGCTGCGCGGCATCTCGGCATTGGTGCTGCTGTTTTACCTGTTCTTCATC
CTGCCGCTGTTCGGCATTCGCCTGTCCCCCATGACCACCGGCGTGCTGGGGCTGGGCCTGACGTTTTCGGCGTATGGCGC
GGAGATCATTCGCTCGGCGCTGATCAACGTCAGCCAGGGCCAACGCGATGCGTTGCGTGCGCTGGACTTCGGGCCGATAA
GCGCGTTTCGGCGAATCATTCTGCCGCAGGCCCTGCCGTTCATGATCCCGCCGATGGGCAATCAATTGGTCGAGCTGCTG
AAAACCACATCGCTGGTTTCGCTCATCACCCTCACCGACCTGACCTTCACCGGCAGTCAATTGATCACCACGCTGGGCCA
GCAGACGCTGATCTGGAGCATCGTGCTGGTGTGCTATTTCGTGATGGCCTGGCCACTGAGCTGGCTGGTCCGACGCTATG
AGCAGCACGCCACCGCGTGGCGCAAGGCCAGGGGATGA

Upstream 100 bases:

>100_bases
GGCTGACCCGGCCATCACCGCAGCCCAACGCTGCAACCCATGACCTGCCTCGCCCCGCGAGGGCGCGCAGTAAACGGCCC
TGACCCACACGAGTACGGCC

Downstream 100 bases:

>100_bases
ACGATGGAATTTGATATCGCATTCGCCTGGTCGATTCTGCCGGAGCTGTTTCAGGGTTTGCTGGTGACCGTGCAGGTCGT
GGTCCTCGGGTTCATGCTCG

Product: amino acid ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MPVDAATLETAGFIARQLAHGAWITLQITVLAELLVLVLSFVIALMRLSPFRALRWFATVYVEVLRGISALVLLFYLFFI
LPLFGIRLSPMTTGVLGLGLTFSAYGAEIIRSALINVSQGQRDALRALDFGPISAFRRIILPQALPFMIPPMGNQLVELL
KTTSLVSLITLTDLTFTGSQLITTLGQQTLIWSIVLVCYFVMAWPLSWLVRRYEQHATAWRKARG

Sequences:

>Translated_225_residues
MPVDAATLETAGFIARQLAHGAWITLQITVLAELLVLVLSFVIALMRLSPFRALRWFATVYVEVLRGISALVLLFYLFFI
LPLFGIRLSPMTTGVLGLGLTFSAYGAEIIRSALINVSQGQRDALRALDFGPISAFRRIILPQALPFMIPPMGNQLVELL
KTTSLVSLITLTDLTFTGSQLITTLGQQTLIWSIVLVCYFVMAWPLSWLVRRYEQHATAWRKARG
>Mature_224_residues
PVDAATLETAGFIARQLAHGAWITLQITVLAELLVLVLSFVIALMRLSPFRALRWFATVYVEVLRGISALVLLFYLFFIL
PLFGIRLSPMTTGVLGLGLTFSAYGAEIIRSALINVSQGQRDALRALDFGPISAFRRIILPQALPFMIPPMGNQLVELLK
TTSLVSLITLTDLTFTGSQLITTLGQQTLIWSIVLVCYFVMAWPLSWLVRRYEQHATAWRKARG

Specific function: Probably part of the binding-protein-dependent transport system y4tEFGH for an amino acid. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=201, Percent_Identity=38.3084577114428, Blast_Score=127, Evalue=5e-31,
Organism=Escherichia coli, GI1787030, Length=201, Percent_Identity=34.3283582089552, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1786873, Length=210, Percent_Identity=33.8095238095238, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1787087, Length=230, Percent_Identity=29.1304347826087, Blast_Score=84, Evalue=6e-18,
Organism=Escherichia coli, GI1788646, Length=166, Percent_Identity=30.7228915662651, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI87082239, Length=182, Percent_Identity=32.4175824175824, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1786874, Length=177, Percent_Identity=25.9887005649718, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI1788645, Length=205, Percent_Identity=27.8048780487805, Blast_Score=64, Evalue=7e-12,
Organism=Escherichia coli, GI48994930, Length=123, Percent_Identity=32.520325203252, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515
- InterPro:   IPR014342 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 25054; Mature: 24923

Theoretical pI: Translated: 10.67; Mature: 10.67

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVDAATLETAGFIARQLAHGAWITLQITVLAELLVLVLSFVIALMRLSPFRALRWFATV
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
YVEVLRGISALVLLFYLFFILPLFGIRLSPMTTGVLGLGLTFSAYGAEIIRSALINVSQG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
QRDALRALDFGPISAFRRIILPQALPFMIPPMGNQLVELLKTTSLVSLITLTDLTFTGSQ
HHHHHHHHCCCHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LITTLGQQTLIWSIVLVCYFVMAWPLSWLVRRYEQHATAWRKARG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PVDAATLETAGFIARQLAHGAWITLQITVLAELLVLVLSFVIALMRLSPFRALRWFATV
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
YVEVLRGISALVLLFYLFFILPLFGIRLSPMTTGVLGLGLTFSAYGAEIIRSALINVSQG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
QRDALRALDFGPISAFRRIILPQALPFMIPPMGNQLVELLKTTSLVSLITLTDLTFTGSQ
HHHHHHHHCCCHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LITTLGQQTLIWSIVLVCYFVMAWPLSWLVRRYEQHATAWRKARG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]