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The map label for this gene is yecS [C]

Identifier: 66046195

GI number: 66046195

Start: 3552628

End: 3553278

Strand: Direct

Name: yecS [C]

Synonym: Psyr_2964

Alternate gene names: 66046195

Gene position: 3552628-3553278 (Clockwise)

Preceding gene: 66046194

Following gene: 66046196

Centisome position: 58.3

GC content: 57.76

Gene sequence:

>651_bases
ATGGAATTTGATATCGCATTCGCCTGGTCGATTCTGCCGGAGCTGTTTCAGGGTTTGCTGGTGACCGTGCAGGTCGTGGT
CCTCGGGTTCATGCTCGCGGTGTTGCTCGGTCTGTTCCTGGCCCTGACACTACGCTCGCAGATAACCATCGTGCATCGCC
TGAGCAAAGGCTACCTGAGCTTTTTCCGCAATACGCCGCTGATGGTCCAGTTGTATGTACTGTTCTTCGCCCTGCCGCTG
GCGGGCATTACCTTTCCGGCGGTCACCACCGGTGTGATCGGCCTTGGCTGCTATTACGCGGCTTACATTGCCGAAGCGTA
TCGCGGAGCCATTGACGACATCCCGGCCGGACAATGGGAAGCCGCACGCGCCCTGGACTTCAATCGTAGCGACACCTGGC
GGCGCATCATCCTGCCGCAGGCGTTGAAACCCATGCTGCCGGTGCTCGGCAATTACCTGATCGGCATGTTCAAGGAAACC
CCGCTTCTGGCGGTGATTACCATCCCTGAACTGTTTCAGGCCGCCAAGCAGATCGCCGGCATGACCTATCGTTACAACGA
ACCGTACACGGTGATGGCGCTGATGTTTCTGGCAATCAGCGTGCCGACCTCGTTGCTGTTCAAATACCTGGAAAGACGCA
GCCATGTCTGA

Upstream 100 bases:

>100_bases
CGTGCTGGTGTGCTATTTCGTGATGGCCTGGCCACTGAGCTGGCTGGTCCGACGCTATGAGCAGCACGCCACCGCGTGGC
GCAAGGCCAGGGGATGAACG

Downstream 100 bases:

>100_bases
TCTCGCACACACCGCAATCCCGCCCGTCACCACCGCGCAGATACAGCTGAAACACGTGGTCAAGGACTTCGGCCACAACC
GGATTATCGACCACTTGGAC

Product: amino acid ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MEFDIAFAWSILPELFQGLLVTVQVVVLGFMLAVLLGLFLALTLRSQITIVHRLSKGYLSFFRNTPLMVQLYVLFFALPL
AGITFPAVTTGVIGLGCYYAAYIAEAYRGAIDDIPAGQWEAARALDFNRSDTWRRIILPQALKPMLPVLGNYLIGMFKET
PLLAVITIPELFQAAKQIAGMTYRYNEPYTVMALMFLAISVPTSLLFKYLERRSHV

Sequences:

>Translated_216_residues
MEFDIAFAWSILPELFQGLLVTVQVVVLGFMLAVLLGLFLALTLRSQITIVHRLSKGYLSFFRNTPLMVQLYVLFFALPL
AGITFPAVTTGVIGLGCYYAAYIAEAYRGAIDDIPAGQWEAARALDFNRSDTWRRIILPQALKPMLPVLGNYLIGMFKET
PLLAVITIPELFQAAKQIAGMTYRYNEPYTVMALMFLAISVPTSLLFKYLERRSHV
>Mature_216_residues
MEFDIAFAWSILPELFQGLLVTVQVVVLGFMLAVLLGLFLALTLRSQITIVHRLSKGYLSFFRNTPLMVQLYVLFFALPL
AGITFPAVTTGVIGLGCYYAAYIAEAYRGAIDDIPAGQWEAARALDFNRSDTWRRIILPQALKPMLPVLGNYLIGMFKET
PLLAVITIPELFQAAKQIAGMTYRYNEPYTVMALMFLAISVPTSLLFKYLERRSHV

Specific function: Probably part of the binding-protein-dependent transport system y4tEFGH for an amino acid. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=213, Percent_Identity=37.5586854460094, Blast_Score=129, Evalue=1e-31,
Organism=Escherichia coli, GI1787030, Length=218, Percent_Identity=33.4862385321101, Blast_Score=114, Evalue=4e-27,
Organism=Escherichia coli, GI87082239, Length=207, Percent_Identity=33.3333333333333, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1788646, Length=216, Percent_Identity=30.0925925925926, Blast_Score=94, Evalue=6e-21,
Organism=Escherichia coli, GI1786873, Length=221, Percent_Identity=29.4117647058824, Blast_Score=93, Evalue=1e-20,
Organism=Escherichia coli, GI1788645, Length=216, Percent_Identity=31.9444444444444, Blast_Score=91, Evalue=6e-20,
Organism=Escherichia coli, GI1787086, Length=214, Percent_Identity=28.5046728971963, Blast_Score=88, Evalue=5e-19,
Organism=Escherichia coli, GI1787087, Length=128, Percent_Identity=35.15625, Blast_Score=85, Evalue=3e-18,
Organism=Escherichia coli, GI1786874, Length=216, Percent_Identity=24.537037037037, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI48994930, Length=129, Percent_Identity=32.5581395348837, Blast_Score=66, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515
- InterPro:   IPR014341 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 24252; Mature: 24252

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFDIAFAWSILPELFQGLLVTVQVVVLGFMLAVLLGLFLALTLRSQITIVHRLSKGYLS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFRNTPLMVQLYVLFFALPLAGITFPAVTTGVIGLGCYYAAYIAEAYRGAIDDIPAGQWE
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCCCHH
AARALDFNRSDTWRRIILPQALKPMLPVLGNYLIGMFKETPLLAVITIPELFQAAKQIAG
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHC
MTYRYNEPYTVMALMFLAISVPTSLLFKYLERRSHV
CCEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MEFDIAFAWSILPELFQGLLVTVQVVVLGFMLAVLLGLFLALTLRSQITIVHRLSKGYLS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFRNTPLMVQLYVLFFALPLAGITFPAVTTGVIGLGCYYAAYIAEAYRGAIDDIPAGQWE
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCCCHH
AARALDFNRSDTWRRIILPQALKPMLPVLGNYLIGMFKETPLLAVITIPELFQAAKQIAG
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHC
MTYRYNEPYTVMALMFLAISVPTSLLFKYLERRSHV
CCEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]