| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66046161
Identifier: 66046161
GI number: 66046161
Start: 3519521
End: 3519946
Strand: Reverse
Name: 66046161
Synonym: Psyr_2930
Alternate gene names: NA
Gene position: 3519946-3519521 (Counterclockwise)
Preceding gene: 66046162
Following gene: 66046157
Centisome position: 57.76
GC content: 55.16
Gene sequence:
>426_bases ATGAGTCTTTCTCCTTTCCACCTTGCAATCCCGGTTTATGACCTGGCCGCGACACGTACCTTTTACGGTGAAGTGTTTGG TCTTTCCGAAGGGCGCTCCAGCGACCAGTGGGTCGACTTCGATTTCTACGGGCATCAGTTGGTGATTCATGAACACCCGA AAACTGCCTCTCAAGAGAGCGTGCACAGCAACCCGGTAGACGGCCACGACGTGCCGGTTCCGCACTTCGGCATCATTCTG GAATGGGCCCAGTGGGAAGCTTTGGCCGAGCGCCTGAAATCCTTCGGCACCGAGTTCGTCATCGAACCCTACATTCGCTT CAAGGGGCAGGTGGGGGAGCAGGCCACCATGTTCCTTTTCGATCCCTGTGGTAATGCGCTTGAGTTCAAGGCGTTCAAGG ACATGAGTCAGCTGTTCGCAAAATAG
Upstream 100 bases:
>100_bases TGTCGCCCGGCTTTAGCATGAGTGGAACTTGAACAAGTCGCCGGGCAGTGATCACGCCGCCCGGCTTCACACGCCACCAA GAGCCGCAATCGGAGTCCTG
Downstream 100 bases:
>100_bases TAAAAGGCCTGGCGCACACCACGTCGCGCCAGGCCTGCTTGAGCAGGCGCAGCGCTAACGAGTCAGAGCGTGGTCGTTAA TCAGTTGCACCAGCGCGCTC
Product: glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: Glyoxalase Family Protein; Ring-Cleaving Dioxygenase; Dioxygenase; Extradiol Dioxygenase Family Protein; Dioxygenase/Glyoxalase; Glyoxalase Domain Protein; Glyoxalase/Extradiol Ring-Cleavage Dioxygenase; Glyoxalase/Bleomycin Resistance Family Protein; Dioxygenase Of Extradiol Dioxygenase Family Protein; Glyoxalase/Bleomycin Resistance Protein; Dioxygenase Protein; Glyoxalase; Glyoxalase/Bleomycin Resistance; Extradiol Family Dioxygenase; Extradiol Dioxygenase; Lactoylglutathione Lyase Protein
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MSLSPFHLAIPVYDLAATRTFYGEVFGLSEGRSSDQWVDFDFYGHQLVIHEHPKTASQESVHSNPVDGHDVPVPHFGIIL EWAQWEALAERLKSFGTEFVIEPYIRFKGQVGEQATMFLFDPCGNALEFKAFKDMSQLFAK
Sequences:
>Translated_141_residues MSLSPFHLAIPVYDLAATRTFYGEVFGLSEGRSSDQWVDFDFYGHQLVIHEHPKTASQESVHSNPVDGHDVPVPHFGIIL EWAQWEALAERLKSFGTEFVIEPYIRFKGQVGEQATMFLFDPCGNALEFKAFKDMSQLFAK >Mature_140_residues SLSPFHLAIPVYDLAATRTFYGEVFGLSEGRSSDQWVDFDFYGHQLVIHEHPKTASQESVHSNPVDGHDVPVPHFGIILE WAQWEALAERLKSFGTEFVIEPYIRFKGQVGEQATMFLFDPCGNALEFKAFKDMSQLFAK
Specific function: Unknown
COG id: COG3565
COG function: function code R; Predicted dioxygenase of extradiol dioxygenase family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16027; Mature: 15896
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSPFHLAIPVYDLAATRTFYGEVFGLSEGRSSDQWVDFDFYGHQLVIHEHPKTASQES CCCCCEEEEEEHHHHHHHHHHHHHEEECCCCCCCCCEEEEEECCCEEEEECCCCCCCCCC VHSNPVDGHDVPVPHFGIILEWAQWEALAERLKSFGTEFVIEPYIRFKGQVGEQATMFLF CCCCCCCCCCCCCCCHHEEEEHHHHHHHHHHHHHCCCCEEEECCEEECCCCCCCEEEEEE DPCGNALEFKAFKDMSQLFAK CCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure SLSPFHLAIPVYDLAATRTFYGEVFGLSEGRSSDQWVDFDFYGHQLVIHEHPKTASQES CCCCEEEEEEHHHHHHHHHHHHHEEECCCCCCCCCEEEEEECCCEEEEECCCCCCCCCC VHSNPVDGHDVPVPHFGIILEWAQWEALAERLKSFGTEFVIEPYIRFKGQVGEQATMFLF CCCCCCCCCCCCCCCHHEEEEHHHHHHHHHHHHHCCCCEEEECCEEECCCCCCCEEEEEE DPCGNALEFKAFKDMSQLFAK CCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA