Definition Pseudomonas syringae pv. syringae B728a, complete genome.
Accession NC_007005
Length 6,093,698

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The map label for this gene is fliY [H]

Identifier: 66046120

GI number: 66046120

Start: 3466248

End: 3467177

Strand: Reverse

Name: fliY [H]

Synonym: Psyr_2889

Alternate gene names: 66046120

Gene position: 3467177-3466248 (Counterclockwise)

Preceding gene: 66046121

Following gene: 66046119

Centisome position: 56.9

GC content: 60.43

Gene sequence:

>930_bases
ATGTTCATCAATAGCGCCCGTGTGGCCTTGCTGACGCTAGCTGTCAGCGTCGCCCACAATACGTTGGCGTCGACCGCGCA
ACCGGTCGATCTGAGTCCCGACCGGCCACGCATTCATGTGCCGCGTAACGAGGCGGCCATCGCACAGATCCCGGCGGGCT
TCAAGTTCGCCCAGCCTGGCAAGTTCACCGTGGCCGTCTCCGGTGTTGCGGGGCCACCGTTGGCGCTGCTGGCCAACGAC
GACAAAACCACTATCGGCAGCGAGGCCGATACCGCGCAACTGGTAGCGGATAGCCTGGGCTTGCAATTGAACGTGGTGCA
GACCAGTTGGGAGGACTGGCCGCTGGGCGTCAGTTCGGGAAAATACGACGCGGTGATCAGCAATGTCACAGTCACTGAAG
CACGCAAGAAACGCTTCGATTTCGCCACTTACCGTCAGGACGTCCTGGGCTTCTACGTGAAAGCCAACAGCAAAATCAGC
GAGATAAAACAGGCGTCGGACATTGCCGGGCTGAAAATTATCGTCGGCTCCGGCACCAATCAGGAAAAGGTTCTGCTGGC
GTGGAACGAAGCGAATGAAAAGGCCGGTATCAAGCCTGCGCTGTTGCAGTACTTCGATGATCAGGCGGCCGCACAACTTG
CCATTCAGTCGGGTCGCAGTGATGCGCTGTTCGGGCCCAATTCGATATATGCCTATTCGGCCGCGATTACTGGCGGCATC
AAGCGGGTAGGCACGGTTAATGGCGGCTGGCCGCTGCAGGCGGATATCGCCGTGACCACGCGCAAGGACAACGGCCTGGT
CAGGCCGATTCACACCGCCCTGGAAGGAGCGATTGCCGGCGGCCAGTACGAGCAGGTGCTCAAACGCTGGGGGCTGGATG
TGGAGCGCGTCGACAGGTCGTTGATCAACCCGCCCGGCTTGCCGGACTGA

Upstream 100 bases:

>100_bases
GGGCCGCCGGAACAAGTGTTCCACCAACCTCGACATCCTCGCACGGCTGCCTTTCTCGGCAAGGTGCTATGACTTTCCCG
CTATCAAGGAGTGACCACTG

Downstream 100 bases:

>100_bases
AGCGTTGAAGGGAGCAAACGATATGGGACTGACACGACGTGAAGCGCTTTCCAGTATCGCTGCCGTGGGCGGCGAGACCG
CCGTCAAGGATGCGCTTGCG

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: CBP; Protein fliY; Sulfate starvation-induced protein 7; SSI7 [H]

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MFINSARVALLTLAVSVAHNTLASTAQPVDLSPDRPRIHVPRNEAAIAQIPAGFKFAQPGKFTVAVSGVAGPPLALLAND
DKTTIGSEADTAQLVADSLGLQLNVVQTSWEDWPLGVSSGKYDAVISNVTVTEARKKRFDFATYRQDVLGFYVKANSKIS
EIKQASDIAGLKIIVGSGTNQEKVLLAWNEANEKAGIKPALLQYFDDQAAAQLAIQSGRSDALFGPNSIYAYSAAITGGI
KRVGTVNGGWPLQADIAVTTRKDNGLVRPIHTALEGAIAGGQYEQVLKRWGLDVERVDRSLINPPGLPD

Sequences:

>Translated_309_residues
MFINSARVALLTLAVSVAHNTLASTAQPVDLSPDRPRIHVPRNEAAIAQIPAGFKFAQPGKFTVAVSGVAGPPLALLAND
DKTTIGSEADTAQLVADSLGLQLNVVQTSWEDWPLGVSSGKYDAVISNVTVTEARKKRFDFATYRQDVLGFYVKANSKIS
EIKQASDIAGLKIIVGSGTNQEKVLLAWNEANEKAGIKPALLQYFDDQAAAQLAIQSGRSDALFGPNSIYAYSAAITGGI
KRVGTVNGGWPLQADIAVTTRKDNGLVRPIHTALEGAIAGGQYEQVLKRWGLDVERVDRSLINPPGLPD
>Mature_309_residues
MFINSARVALLTLAVSVAHNTLASTAQPVDLSPDRPRIHVPRNEAAIAQIPAGFKFAQPGKFTVAVSGVAGPPLALLAND
DKTTIGSEADTAQLVADSLGLQLNVVQTSWEDWPLGVSSGKYDAVISNVTVTEARKKRFDFATYRQDVLGFYVKANSKIS
EIKQASDIAGLKIIVGSGTNQEKVLLAWNEANEKAGIKPALLQYFDDQAAAQLAIQSGRSDALFGPNSIYAYSAAITGGI
KRVGTVNGGWPLQADIAVTTRKDNGLVRPIHTALEGAIAGGQYEQVLKRWGLDVERVDRSLINPPGLPD

Specific function: Part of a binding-protein-dependent transport system for cystine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1788228, Length=171, Percent_Identity=30.9941520467836, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015683
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 32872; Mature: 32872

Theoretical pI: Translated: 7.74; Mature: 7.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFINSARVALLTLAVSVAHNTLASTAQPVDLSPDRPRIHVPRNEAAIAQIPAGFKFAQPG
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCEEEECCCCCEECCCC
KFTVAVSGVAGPPLALLANDDKTTIGSEADTAQLVADSLGLQLNVVQTSWEDWPLGVSSG
EEEEEEECCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCC
KYDAVISNVTVTEARKKRFDFATYRQDVLGFYVKANSKISEIKQASDIAGLKIIVGSGTN
CCEEEEECEEHHHHHHHHCCHHHHHHHHHEEEEECCCHHHHHHHHHCCCCEEEEEECCCC
QEKVLLAWNEANEKAGIKPALLQYFDDQAAAQLAIQSGRSDALFGPNSIYAYSAAITGGI
CCEEEEEECCCCCCCCCCHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHCCH
KRVGTVNGGWPLQADIAVTTRKDNGLVRPIHTALEGAIAGGQYEQVLKRWGLDVERVDRS
HEEEECCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHH
LINPPGLPD
HCCCCCCCC
>Mature Secondary Structure
MFINSARVALLTLAVSVAHNTLASTAQPVDLSPDRPRIHVPRNEAAIAQIPAGFKFAQPG
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCEEEECCCCCEECCCC
KFTVAVSGVAGPPLALLANDDKTTIGSEADTAQLVADSLGLQLNVVQTSWEDWPLGVSSG
EEEEEEECCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCC
KYDAVISNVTVTEARKKRFDFATYRQDVLGFYVKANSKISEIKQASDIAGLKIIVGSGTN
CCEEEEECEEHHHHHHHHCCHHHHHHHHHEEEEECCCHHHHHHHHHCCCCEEEEEECCCC
QEKVLLAWNEANEKAGIKPALLQYFDDQAAAQLAIQSGRSDALFGPNSIYAYSAAITGGI
CCEEEEEECCCCCCCCCCHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHCCH
KRVGTVNGGWPLQADIAVTTRKDNGLVRPIHTALEGAIAGGQYEQVLKRWGLDVERVDRS
HEEEECCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHH
LINPPGLPD
HCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]