Click here to switch to the map view.

The map label for this gene is yobN [H]

Identifier: 66046119

GI number: 66046119

Start: 3464642

End: 3466225

Strand: Reverse

Name: yobN [H]

Synonym: Psyr_2888

Alternate gene names: 66046119

Gene position: 3466225-3464642 (Counterclockwise)

Preceding gene: 66046120

Following gene: 66046118

Centisome position: 56.88

GC content: 63.32

Gene sequence:

>1584_bases
ATGGGACTGACACGACGTGAAGCGCTTTCCAGTATCGCTGCCGTGGGCGGCGAGACCGCCGTCAAGGATGCGCTTGCGGT
ACTGGGGCTGGGGCCTTCATCACATCGACGGCCACAGCCTCTGAAACTCGGCGACGGTCTGGGGCAGGGCACGCGCGTGC
TGGTGCTGGGGGCAGGCATTGCCGGGCTGGTCACGGCACTGGAACTGAAGCGCGCAGGTTTTGCCGTGCAAGTGCTGGAA
GCCCGTGAGCGAGTGGGTGGCCGTAACTGGACGCTGCGCAACGGCGATCGGGTGGAGTACAAGGACGGCCGCTCACAGAC
CGCAAGCTTCGATTCAGGGGTGTATTTCAATGCCGGTCCGGCGCGCATTCCCAGCCAGCATCGGACGTTGCTCGACTACT
GCAGTGAACTGGGTGTGCCGCTTGAAGTACTGGTCAACAGCAGCCATGGAGCACAGGTACGCCCGGACCTGCAACGCCCC
GCGTTCACTGTCGGCCAGGCGATCAATGACGCTCGCGGCCATCTTTCCGGTTTGCTGGCCAGGGCGGTGCAGCGCGACGC
GCTGGACGATGTGTTGAGTGGCGAGGAGCGTCAGCGGCTGTTGGCGTTCTTGCAGGTGTATGGCGACCTTTCGCAGGAGC
TGGCGTACGAGGGCAGCCTGCGCTCCGGCCATCGGACGTCACTTTCTCATCCGGGAGCCTTGCCGACCAGTGCGCAACCG
GTGGCGCTGGATCGCTTGCTGCACCCCGAATTGTGGGGCGCACTGCTGCACACCGAGTTTCCCGAGTTTTCCGCGACCAT
GTTTCAACCGGTCGGTGGCATGGACCGGATCACCGACGCCTTTTACCAGCGCCTCACCGACCAGGTGCAACTGGGCGCGC
AGGTACGGCAGATTCGTCAACTGGAAGACGGCGTGGCAGTTACCTATCACGACAGATACAGCGGTCGCGAGCATGTGGTG
CGCGCCGACTATCTGGTGTCAACCCTGCCACTGCCCTTGCTGGCCAGACTGGACACCGATTTCAGTGACCCGGTCAAGGC
GGCCTTGCTCAGCACCCGCAACGATCAGGCGACCAAGGTGGCCTGGCAATCTCCGCGTTTTTGGGAAACCGACTACCGCA
TCTACGGCGGGTTGTCCTGGATCGACCATCCGGCGCGGCTGTTGTGGTATCCCAGTAACGATTTGAACACCCGTGAAGGT
CTGCTGGTGGCGGGTTATGTCACCGGGGAGGGGGCCGCTGCGTTCGGTGCGCAACCGTTCGACACACAATACGCTGCTTC
CAGAGAAGCGGTAGAGCTGCTGCATCCGGGGTATTCGCGGCAGTTGCGCAACCCGCTGGCCGTGTCCTGGGAGCAGATCC
CTTACAGCGAAGGCCCTTGGTTGCAACGCGAACATTTTCCGGCCGCTGCCAGTGCGTTGCTGGACGAGCCCCATAGTCGT
GTGTACTTCGCCGGTGACGGGCTGGTGCAAAGCGGAGTCGGCATCTGGCAGGAGTCGGCGGCCAACTCGGCGCGACATGT
GGTGGCGCAACTGGCCGAGCGAGTGAGGCAAGTGCGGCAGATTTCGACCCTTGCCGCGTCATGA

Upstream 100 bases:

>100_bases
CAGGTGCTCAAACGCTGGGGGCTGGATGTGGAGCGCGTCGACAGGTCGTTGATCAACCCGCCCGGCTTGCCGGACTGAAG
CGTTGAAGGGAGCAAACGAT

Downstream 100 bases:

>100_bases
CGTGCAACTGCACGACCCCGTCGTTTTACGTAACCCTTATTCCTGAATATCCATTGAAGGAGAGACACCATGAGCGACAG
CATTCAACGCACCAGCGTCG

Product: amine oxidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 527; Mature: 526

Protein sequence:

>527_residues
MGLTRREALSSIAAVGGETAVKDALAVLGLGPSSHRRPQPLKLGDGLGQGTRVLVLGAGIAGLVTALELKRAGFAVQVLE
ARERVGGRNWTLRNGDRVEYKDGRSQTASFDSGVYFNAGPARIPSQHRTLLDYCSELGVPLEVLVNSSHGAQVRPDLQRP
AFTVGQAINDARGHLSGLLARAVQRDALDDVLSGEERQRLLAFLQVYGDLSQELAYEGSLRSGHRTSLSHPGALPTSAQP
VALDRLLHPELWGALLHTEFPEFSATMFQPVGGMDRITDAFYQRLTDQVQLGAQVRQIRQLEDGVAVTYHDRYSGREHVV
RADYLVSTLPLPLLARLDTDFSDPVKAALLSTRNDQATKVAWQSPRFWETDYRIYGGLSWIDHPARLLWYPSNDLNTREG
LLVAGYVTGEGAAAFGAQPFDTQYAASREAVELLHPGYSRQLRNPLAVSWEQIPYSEGPWLQREHFPAAASALLDEPHSR
VYFAGDGLVQSGVGIWQESAANSARHVVAQLAERVRQVRQISTLAAS

Sequences:

>Translated_527_residues
MGLTRREALSSIAAVGGETAVKDALAVLGLGPSSHRRPQPLKLGDGLGQGTRVLVLGAGIAGLVTALELKRAGFAVQVLE
ARERVGGRNWTLRNGDRVEYKDGRSQTASFDSGVYFNAGPARIPSQHRTLLDYCSELGVPLEVLVNSSHGAQVRPDLQRP
AFTVGQAINDARGHLSGLLARAVQRDALDDVLSGEERQRLLAFLQVYGDLSQELAYEGSLRSGHRTSLSHPGALPTSAQP
VALDRLLHPELWGALLHTEFPEFSATMFQPVGGMDRITDAFYQRLTDQVQLGAQVRQIRQLEDGVAVTYHDRYSGREHVV
RADYLVSTLPLPLLARLDTDFSDPVKAALLSTRNDQATKVAWQSPRFWETDYRIYGGLSWIDHPARLLWYPSNDLNTREG
LLVAGYVTGEGAAAFGAQPFDTQYAASREAVELLHPGYSRQLRNPLAVSWEQIPYSEGPWLQREHFPAAASALLDEPHSR
VYFAGDGLVQSGVGIWQESAANSARHVVAQLAERVRQVRQISTLAAS
>Mature_526_residues
GLTRREALSSIAAVGGETAVKDALAVLGLGPSSHRRPQPLKLGDGLGQGTRVLVLGAGIAGLVTALELKRAGFAVQVLEA
RERVGGRNWTLRNGDRVEYKDGRSQTASFDSGVYFNAGPARIPSQHRTLLDYCSELGVPLEVLVNSSHGAQVRPDLQRPA
FTVGQAINDARGHLSGLLARAVQRDALDDVLSGEERQRLLAFLQVYGDLSQELAYEGSLRSGHRTSLSHPGALPTSAQPV
ALDRLLHPELWGALLHTEFPEFSATMFQPVGGMDRITDAFYQRLTDQVQLGAQVRQIRQLEDGVAVTYHDRYSGREHVVR
ADYLVSTLPLPLLARLDTDFSDPVKAALLSTRNDQATKVAWQSPRFWETDYRIYGGLSWIDHPARLLWYPSNDLNTREGL
LVAGYVTGEGAAAFGAQPFDTQYAASREAVELLHPGYSRQLRNPLAVSWEQIPYSEGPWLQREHFPAAASALLDEPHSRV
YFAGDGLVQSGVGIWQESAANSARHVVAQLAERVRQVRQISTLAAS

Specific function: Unknown

COG id: COG1231

COG function: function code E; Monoamine oxidase

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flavin monoamine oxidase family. FIG1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI27477089, Length=494, Percent_Identity=28.3400809716599, Blast_Score=90, Evalue=7e-18,
Organism=Homo sapiens, GI23821023, Length=494, Percent_Identity=28.3400809716599, Blast_Score=90, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001613
- InterPro:   IPR002937 [H]

Pfam domain/function: PF01593 Amino_oxidase [H]

EC number: =1.4.3.2 [H]

Molecular weight: Translated: 57629; Mature: 57498

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLTRREALSSIAAVGGETAVKDALAVLGLGPSSHRRPQPLKLGDGLGQGTRVLVLGAGI
CCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCH
AGLVTALELKRAGFAVQVLEARERVGGRNWTLRNGDRVEYKDGRSQTASFDSGVYFNAGP
HHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEECCCCEEEECCCCCCCCCCCCCEEECCCC
ARIPSQHRTLLDYCSELGVPLEVLVNSSHGAQVRPDLQRPAFTVGQAINDARGHLSGLLA
CCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
RAVQRDALDDVLSGEERQRLLAFLQVYGDLSQELAYEGSLRSGHRTSLSHPGALPTSAQP
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
VALDRLLHPELWGALLHTEFPEFSATMFQPVGGMDRITDAFYQRLTDQVQLGAQVRQIRQ
HHHHHHHCHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEDGVAVTYHDRYSGREHVVRADYLVSTLPLPLLARLDTDFSDPVKAALLSTRNDQATKV
HHCCCEEEEECCCCCCHHEEHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHCCCCCHHEE
AWQSPRFWETDYRIYGGLSWIDHPARLLWYPSNDLNTREGLLVAGYVTGEGAAAFGAQPF
EECCCCCCCCCCEEECCCHHHCCCCEEEEECCCCCCCCCCEEEEEEEECCCCHHCCCCCC
DTQYAASREAVELLHPGYSRQLRNPLAVSWEQIPYSEGPWLQREHFPAAASALLDEPHSR
CCHHHHHHHHHHHHCCCHHHHHCCCHHCCHHHCCCCCCCCCCHHCCCHHHHHHHCCCCCE
VYFAGDGLVQSGVGIWQESAANSARHVVAQLAERVRQVRQISTLAAS
EEEECCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GLTRREALSSIAAVGGETAVKDALAVLGLGPSSHRRPQPLKLGDGLGQGTRVLVLGAGI
CCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCH
AGLVTALELKRAGFAVQVLEARERVGGRNWTLRNGDRVEYKDGRSQTASFDSGVYFNAGP
HHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEECCCCEEEECCCCCCCCCCCCCEEECCCC
ARIPSQHRTLLDYCSELGVPLEVLVNSSHGAQVRPDLQRPAFTVGQAINDARGHLSGLLA
CCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
RAVQRDALDDVLSGEERQRLLAFLQVYGDLSQELAYEGSLRSGHRTSLSHPGALPTSAQP
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
VALDRLLHPELWGALLHTEFPEFSATMFQPVGGMDRITDAFYQRLTDQVQLGAQVRQIRQ
HHHHHHHCHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEDGVAVTYHDRYSGREHVVRADYLVSTLPLPLLARLDTDFSDPVKAALLSTRNDQATKV
HHCCCEEEEECCCCCCHHEEHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHCCCCCHHEE
AWQSPRFWETDYRIYGGLSWIDHPARLLWYPSNDLNTREGLLVAGYVTGEGAAAFGAQPF
EECCCCCCCCCCEEECCCHHHCCCCEEEEECCCCCCCCCCEEEEEEEECCCCHHCCCCCC
DTQYAASREAVELLHPGYSRQLRNPLAVSWEQIPYSEGPWLQREHFPAAASALLDEPHSR
CCHHHHHHHHHHHHCCCHHHHHCCCHHCCHHHCCCCCCCCCCHHCCCHHHHHHHCCCCCE
VYFAGDGLVQSGVGIWQESAANSARHVVAQLAERVRQVRQISTLAAS
EEEECCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]