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The map label for this gene is 66046112

Identifier: 66046112

GI number: 66046112

Start: 3456715

End: 3457482

Strand: Direct

Name: 66046112

Synonym: Psyr_2881

Alternate gene names: NA

Gene position: 3456715-3457482 (Clockwise)

Preceding gene: 66046111

Following gene: 66046114

Centisome position: 56.73

GC content: 53.65

Gene sequence:

>768_bases
ATGACCTATACCGTCAAACAGTATGGATGGATTCGCGATCTGCCTGATCATCGCGATCATCTGTATGCCGCCCCGCCCAC
CGCACTGGCGGCGCTTCCACACAGGGTTGACCTGCGCCCCCATTGCCCGCCTGTATACGATCAGGGCCAACTGGGCAGTT
GCACCGCAAACGGTATTGCCGGAGCGATTCAGTTTGATCGCATGAAGCAAAAGCTGACGCCAGCATTCGAACCCTCGCGG
TTGTTTATCTATTACAACGAACGGGTTATTGAACATACCGTCGATTCGGACAGCGGCGCGATGATCCGGCACGGCATTAA
AAGTGTTGCGAAGCAAGGTGATTGCCCTGAAGAAGAGTGGCCTTATGATATTGAGAAGTTCGCTGTCAAACCTCCGGCAG
CCTGCTACAAGGATGCAAGAAAGTACAAGGCGGTGTCTTATCAGAAAGTTGCGCAAAACCTCAACCAGATGAAAGGCTGC
CTGGCGGCAGGTTATCCGTTTGTCATTGGTTTTTCCGTCTACGAGAGCTTTGAAAGCAAGAAAGTTGCCAAGACCGGGCA
TGCCCCAATGCCGGGTCCTCACGAAAAAATGCTGGGAGGGCACTGCGTATTGGCAGTGGGCTACAACGATGCCCATCAGC
ATTTCATCTTGCGCAACTCATGGGGCGCTGGCTGGGGCATGGAAGGCTACTTCACCCTGCCCTACAGTTATCTGCTGGAT
GAAAATCTGTCCACCGACTTCTGGACGATAAGGGTCGTGGCTGCCTGA

Upstream 100 bases:

>100_bases
CACACTAGGTACTAAATGAATTTTAATCCAACGCCTATCAAAAACCTGCTTACATGAGCGATATCAATTTTCCTGACCGT
GCCTTACAAGGAGAAACGGA

Downstream 100 bases:

>100_bases
CCTTGTCAGGCACTTGAGCATTGCACGGCCGCATTGGCACCCTGCTGGTACTCTCGCGGCGTGCAGCCGAACTCGCGACG
AAACACGGTGTGCAGGTATT

Product: peptidase C1A, papain

Products: NA

Alternate protein names: Cysteine Protease; Papain Cysteine Protease Family Protein; Cysteine Proteinase; Cystein Protease Protein; C1A Family Peptidase; Cysteine Protease-Like Protein; Papain Family Cysteine Protease

Number of amino acids: Translated: 255; Mature: 254

Protein sequence:

>255_residues
MTYTVKQYGWIRDLPDHRDHLYAAPPTALAALPHRVDLRPHCPPVYDQGQLGSCTANGIAGAIQFDRMKQKLTPAFEPSR
LFIYYNERVIEHTVDSDSGAMIRHGIKSVAKQGDCPEEEWPYDIEKFAVKPPAACYKDARKYKAVSYQKVAQNLNQMKGC
LAAGYPFVIGFSVYESFESKKVAKTGHAPMPGPHEKMLGGHCVLAVGYNDAHQHFILRNSWGAGWGMEGYFTLPYSYLLD
ENLSTDFWTIRVVAA

Sequences:

>Translated_255_residues
MTYTVKQYGWIRDLPDHRDHLYAAPPTALAALPHRVDLRPHCPPVYDQGQLGSCTANGIAGAIQFDRMKQKLTPAFEPSR
LFIYYNERVIEHTVDSDSGAMIRHGIKSVAKQGDCPEEEWPYDIEKFAVKPPAACYKDARKYKAVSYQKVAQNLNQMKGC
LAAGYPFVIGFSVYESFESKKVAKTGHAPMPGPHEKMLGGHCVLAVGYNDAHQHFILRNSWGAGWGMEGYFTLPYSYLLD
ENLSTDFWTIRVVAA
>Mature_254_residues
TYTVKQYGWIRDLPDHRDHLYAAPPTALAALPHRVDLRPHCPPVYDQGQLGSCTANGIAGAIQFDRMKQKLTPAFEPSRL
FIYYNERVIEHTVDSDSGAMIRHGIKSVAKQGDCPEEEWPYDIEKFAVKPPAACYKDARKYKAVSYQKVAQNLNQMKGCL
AAGYPFVIGFSVYESFESKKVAKTGHAPMPGPHEKMLGGHCVLAVGYNDAHQHFILRNSWGAGWGMEGYFTLPYSYLLDE
NLSTDFWTIRVVAA

Specific function: Unknown

COG id: COG4870

COG function: function code O; Cysteine protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28635; Mature: 28504

Theoretical pI: Translated: 7.88; Mature: 7.88

Prosite motif: PS00639 THIOL_PROTEASE_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYTVKQYGWIRDLPDHRDHLYAAPPTALAALPHRVDLRPHCPPVYDQGQLGSCTANGIA
CCEECCCCCCCCCCCCCCCCEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
GAIQFDRMKQKLTPAFEPSRLFIYYNERVIEHTVDSDSGAMIRHGIKSVAKQGDCPEEEW
HHHHHHHHHHHCCCCCCCCEEEEEECCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCC
PYDIEKFAVKPPAACYKDARKYKAVSYQKVAQNLNQMKGCLAAGYPFVIGFSVYESFESK
CCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHHHHHH
KVAKTGHAPMPGPHEKMLGGHCVLAVGYNDAHQHFILRNSWGAGWGMEGYFTLPYSYLLD
HHHHCCCCCCCCCHHHHCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCEEECCHHHHHC
ENLSTDFWTIRVVAA
CCCCCCEEEEEEEEC
>Mature Secondary Structure 
TYTVKQYGWIRDLPDHRDHLYAAPPTALAALPHRVDLRPHCPPVYDQGQLGSCTANGIA
CEECCCCCCCCCCCCCCCCEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
GAIQFDRMKQKLTPAFEPSRLFIYYNERVIEHTVDSDSGAMIRHGIKSVAKQGDCPEEEW
HHHHHHHHHHHCCCCCCCCEEEEEECCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCC
PYDIEKFAVKPPAACYKDARKYKAVSYQKVAQNLNQMKGCLAAGYPFVIGFSVYESFESK
CCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHHHHHH
KVAKTGHAPMPGPHEKMLGGHCVLAVGYNDAHQHFILRNSWGAGWGMEGYFTLPYSYLLD
HHHHCCCCCCCCCHHHHCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCEEECCHHHHHC
ENLSTDFWTIRVVAA
CCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA