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The map label for this gene is xylA [H]

Identifier: 66046114

GI number: 66046114

Start: 3458857

End: 3460173

Strand: Direct

Name: xylA [H]

Synonym: Psyr_2883

Alternate gene names: 66046114

Gene position: 3458857-3460173 (Clockwise)

Preceding gene: 66046112

Following gene: 66046115

Centisome position: 56.76

GC content: 60.82

Gene sequence:

>1317_bases
ATGCCGTACTTCCCCGACGTCGACAGGGTTCGCTACGAAGGCCCTGACAGCGACTCGCCTCTCGCCTTTCGCCACTATGA
CGCCGACAAGCTGGTCCTCGGTAAACCCATGCGCGAGCACTTGCGCATGGCGGCCTGCTACTGGCACACCTTCGTATGGC
CGGGCGCCGACATGTTCGGTGTCGGCACCTTCAAGCGCCCCTGGCAAGGGTCCGGTGACCCGATGGAACTGGCCATCGGC
AAGGCCGAAGCAGCGTTCGAGTTCTTCTCCAAGCTCGGCATCGACTACTACAGCTTCCACGACACCGATGTGGCACCGGA
AGGCGCCTCACTGAAGGAGTATCGCCACAACTTCGCGCACATGGTCGATCACCTGGAACGCCATCAGCAACAGAGCGGCA
TAAAACTGCTGTGGGGCACGGCCAACTGCTTCAGCAACCCGCGCTTCGCCGCAGGCGCTGCGAGCAACCCGGACCCGGAA
GTCTTTGCCTACGCCGCGACCCAGGTGTTCAGCGCGATGAATGCCACCCAGCGTCTCAAAGGGTCAAACTACGTGTTGTG
GGGCGGTCGCGAAGGCTACGAAACCCTGCTCAATACGGACCTCAAGCGTGAACGCGAACAGCTCGGTCGCTTCATGCGCA
TGGTGGTCGAACACAAGCACAAGATCGGTTTCAAGGGTGACTTGCTGATAGAGCCCAAGCCACAGGAGCCGACCAAGCAT
CAGTACGATTACGACAGCGCCACGGTGTTCGGTTTTCTGCAGCAGTACGGCCTGGAAAACGAGATCAAGGTCAATATCGA
GGCCAACCACGCCACGCTGGCCGGGCACAGCTTCCATCACGAAATCGCCACGGCGGTCTCGCTGGGGATCTTCGGCAGCA
TCGACGCCAACCGTGGCGACCCACAGAACGGCTGGGACACGGACCAGTTCCCCAACAGCGTTGAGGAGATGACGCTCGCC
ACCTATGAGATTCTCAAGGCTGGTGGCTTCACCAATGGCGGTTTCAATTTCGACTCGAAAGTGCGTCGCCAGAGCCTCGA
CGATATCGATCTGTTCCACGGCCACGTCGCCGCGATGGACGTCCTCGCCCTGGCGCTGGAGCGTGCCGCCGCCATGCTGC
AGAACGATAAACTCCAGCACTTCAAGGATCAGCGCTACGCCGGCTGGCAGCAGCCTTTCGGGCAATCGGTACTGGCAGGC
GAATTCAGCCTTGCCTCGCTCGCCGAACACGCCTTCGCCAACGAACTGAACCCGCAGGCCGTCAGTGGCCGTCAGGAACT
GCTTGAAGGCGTGGTCAACCGCTTTATCTACGCCTGA

Upstream 100 bases:

>100_bases
ACACTCAAAATCGCACTGTGCGTTGACGATTTTCATAATCAGCGCACGCGGGGCCGTTGCTAGTATCCAGACACCGCCAA
GAACAATAAGGAAAACGCTC

Downstream 100 bases:

>100_bases
CAGGCTTGGCTGGACGTCGCCGTGACATTCAGGCGACAAATCTTCATACGCGACGTCCGGCAACGCTCTACAGTTCTATC
GGTATCACCCACAGTCAAGC

Product: xylose isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 438; Mature: 437

Protein sequence:

>438_residues
MPYFPDVDRVRYEGPDSDSPLAFRHYDADKLVLGKPMREHLRMAACYWHTFVWPGADMFGVGTFKRPWQGSGDPMELAIG
KAEAAFEFFSKLGIDYYSFHDTDVAPEGASLKEYRHNFAHMVDHLERHQQQSGIKLLWGTANCFSNPRFAAGAASNPDPE
VFAYAATQVFSAMNATQRLKGSNYVLWGGREGYETLLNTDLKREREQLGRFMRMVVEHKHKIGFKGDLLIEPKPQEPTKH
QYDYDSATVFGFLQQYGLENEIKVNIEANHATLAGHSFHHEIATAVSLGIFGSIDANRGDPQNGWDTDQFPNSVEEMTLA
TYEILKAGGFTNGGFNFDSKVRRQSLDDIDLFHGHVAAMDVLALALERAAAMLQNDKLQHFKDQRYAGWQQPFGQSVLAG
EFSLASLAEHAFANELNPQAVSGRQELLEGVVNRFIYA

Sequences:

>Translated_438_residues
MPYFPDVDRVRYEGPDSDSPLAFRHYDADKLVLGKPMREHLRMAACYWHTFVWPGADMFGVGTFKRPWQGSGDPMELAIG
KAEAAFEFFSKLGIDYYSFHDTDVAPEGASLKEYRHNFAHMVDHLERHQQQSGIKLLWGTANCFSNPRFAAGAASNPDPE
VFAYAATQVFSAMNATQRLKGSNYVLWGGREGYETLLNTDLKREREQLGRFMRMVVEHKHKIGFKGDLLIEPKPQEPTKH
QYDYDSATVFGFLQQYGLENEIKVNIEANHATLAGHSFHHEIATAVSLGIFGSIDANRGDPQNGWDTDQFPNSVEEMTLA
TYEILKAGGFTNGGFNFDSKVRRQSLDDIDLFHGHVAAMDVLALALERAAAMLQNDKLQHFKDQRYAGWQQPFGQSVLAG
EFSLASLAEHAFANELNPQAVSGRQELLEGVVNRFIYA
>Mature_437_residues
PYFPDVDRVRYEGPDSDSPLAFRHYDADKLVLGKPMREHLRMAACYWHTFVWPGADMFGVGTFKRPWQGSGDPMELAIGK
AEAAFEFFSKLGIDYYSFHDTDVAPEGASLKEYRHNFAHMVDHLERHQQQSGIKLLWGTANCFSNPRFAAGAASNPDPEV
FAYAATQVFSAMNATQRLKGSNYVLWGGREGYETLLNTDLKREREQLGRFMRMVVEHKHKIGFKGDLLIEPKPQEPTKHQ
YDYDSATVFGFLQQYGLENEIKVNIEANHATLAGHSFHHEIATAVSLGIFGSIDANRGDPQNGWDTDQFPNSVEEMTLAT
YEILKAGGFTNGGFNFDSKVRRQSLDDIDLFHGHVAAMDVLALALERAAAMLQNDKLQHFKDQRYAGWQQPFGQSVLAGE
FSLASLAEHAFANELNPQAVSGRQELLEGVVNRFIYA

Specific function: Unknown

COG id: COG2115

COG function: function code G; Xylose isomerase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xylose isomerase family [H]

Homologues:

Organism=Escherichia coli, GI1789988, Length=435, Percent_Identity=69.8850574712644, Blast_Score=649, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013022
- InterPro:   IPR012307
- InterPro:   IPR013452
- InterPro:   IPR001998 [H]

Pfam domain/function: PF01261 AP_endonuc_2 [H]

EC number: =5.3.1.5 [H]

Molecular weight: Translated: 49257; Mature: 49125

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: PS00172 XYLOSE_ISOMERASE_1 ; PS00173 XYLOSE_ISOMERASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYFPDVDRVRYEGPDSDSPLAFRHYDADKLVLGKPMREHLRMAACYWHTFVWPGADMFG
CCCCCCCCCEEECCCCCCCCEEEEECCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCEEC
VGTFKRPWQGSGDPMELAIGKAEAAFEFFSKLGIDYYSFHDTDVAPEGASLKEYRHNFAH
CCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHH
MVDHLERHQQQSGIKLLWGTANCFSNPRFAAGAASNPDPEVFAYAATQVFSAMNATQRLK
HHHHHHHHHHHCCCEEEEECHHHCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
GSNYVLWGGREGYETLLNTDLKREREQLGRFMRMVVEHKHKIGFKGDLLIEPKPQEPTKH
CCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCC
QYDYDSATVFGFLQQYGLENEIKVNIEANHATLAGHSFHHEIATAVSLGIFGSIDANRGD
CCCCCHHHHHHHHHHHCCCCEEEEEEEECCEEECCCHHHHHHHHHHHHHHEECCCCCCCC
PQNGWDTDQFPNSVEEMTLATYEILKAGGFTNGGFNFDSKVRRQSLDDIDLFHGHVAAMD
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHH
VLALALERAAAMLQNDKLQHFKDQRYAGWQQPFGQSVLAGEFSLASLAEHAFANELNPQA
HHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCHH
VSGRQELLEGVVNRFIYA
HCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PYFPDVDRVRYEGPDSDSPLAFRHYDADKLVLGKPMREHLRMAACYWHTFVWPGADMFG
CCCCCCCCEEECCCCCCCCEEEEECCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCEEC
VGTFKRPWQGSGDPMELAIGKAEAAFEFFSKLGIDYYSFHDTDVAPEGASLKEYRHNFAH
CCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHH
MVDHLERHQQQSGIKLLWGTANCFSNPRFAAGAASNPDPEVFAYAATQVFSAMNATQRLK
HHHHHHHHHHHCCCEEEEECHHHCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
GSNYVLWGGREGYETLLNTDLKREREQLGRFMRMVVEHKHKIGFKGDLLIEPKPQEPTKH
CCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCC
QYDYDSATVFGFLQQYGLENEIKVNIEANHATLAGHSFHHEIATAVSLGIFGSIDANRGD
CCCCCHHHHHHHHHHHCCCCEEEEEEEECCEEECCCHHHHHHHHHHHHHHEECCCCCCCC
PQNGWDTDQFPNSVEEMTLATYEILKAGGFTNGGFNFDSKVRRQSLDDIDLFHGHVAAMD
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHH
VLALALERAAAMLQNDKLQHFKDQRYAGWQQPFGQSVLAGEFSLASLAEHAFANELNPQA
HHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCHH
VSGRQELLEGVVNRFIYA
HCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA