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The map label for this gene is soxC [H]

Identifier: 66046104

GI number: 66046104

Start: 3447102

End: 3448340

Strand: Direct

Name: soxC [H]

Synonym: Psyr_2873

Alternate gene names: 66046104

Gene position: 3447102-3448340 (Clockwise)

Preceding gene: 66046101

Following gene: 66046110

Centisome position: 56.57

GC content: 62.55

Gene sequence:

>1239_bases
ATGACTCAAACAACCGGCTCGAACCCGCTCTCGCTGGGGACCGATTACGAAACCCTGGCCAACCGATTTCGCCCGATCTT
CCGTGAGATCGGCGCTGGCAGCGTCGAACGCGAAAAAGCCCGCGCCCTGCCCCATGAACCGATTGCCTGGCTGCAGAAAG
CCGGTTTCGGCGCTGTGCGTGTGCCTGTCGAATATGGCGGTGCAGGTGCTTCGATCAGCCAGCTGTTTCAACTGCTGATC
GAGCTGGCCGAAGCCGATTCGAACATTCCGCAAGCCCTGCGTGCGCACTTCGCCTTTGTCGAGGACCGTCTGAATGCACC
GCCCGGCGCTGACCGTGACCAATGGTTTGCACGCTTTGTCGCCGGGGATCTGGTGGGTAACGGCTGGACCGAAGTCGGCG
CGGTGAAAATTGGCGATGTGATGACCAAGGTCAGCCCGCAAGGCGATGGTTTCGTGCTCAACGGCACCAAGTACTACAGC
ACCGGCAGCATCTTTGCCGACTGGATCGACGTCTATGCCCAGCGCTCCGATACTGGCGCCGATGTGATCGCGGTGGTCGA
CGCCAGGCATGCCGGCGTGCGTCACAGTGATGACTGGGACGGGTTCGGCCAGCGCACCACCGGCAGCGGCACCTCGGTCT
ACGACAACGTGCCGCTGCCGGCCACACACGTCATACCGTTCGAGCAACGCTTCAAATACCAGACCGCGTTTTATCAACTG
GTGCTGCTGGCGGTGCTGGCCGGTATCGGTCGAGCTGTCGAACGCGACATCGCTCAGGAAGTGCGCGATCGCAAACGCGT
CTTCAGCCATGGCAACGCCGGGAGCGTCAGCCAGGATTCGCAGGTGCAGCAAGTGGTCGGTCAGATCGCTGCCCAGGTCT
ACGCCGCCGAGGCCGCAACGCTGCGCTCCGCGGAGCCGTTGCAACGTGCCTACGTGGCGCGCTTCGGCAATGACCCACAA
CGGGAAAAAGACGCCAATATCGCCGCCGAAATCGAGACCGCCAAGGCCCAGGTGATCGTCTCGGAACTGGTGCTGCGCGC
TACCAGCGATCTGTTCAACGCGCTAGGCGCTTCAGGTGTCAGCGTCAACAAGGCGCTGGACCGCCACTGGCGCAATGCGC
GCACAGCCGCCTCGCACAATCCGCTGATCTACAAGGCGCGCATTGTCGGTGACTGGCGCATCAACGGCACCGAGCCGCCG
TTTGTCTGGCAGATCGGCAGCGGTAAAGGCAACGCTTGA

Upstream 100 bases:

>100_bases
ACTAAAATCAGTTAGTTACATTCAGGCACAAAGCATGCAAAGAGTCCGACGAACCTTCCACCGGCCCGTGTGCCGATGTC
TTCGCGCTCAGGAGTACTGC

Downstream 100 bases:

>100_bases
GGCACACTTACGCCGCGTTACGCAGCAGGTGGCGACTGGTAAAACTGAACGCCAGCACCAGAAAGATCAGCGCCCCGGTC
GCAACCTGCTGCCAATAGAA

Product: Acyl-CoA dehydrogenase, C-terminal

Products: NA

Alternate protein names: DBT sulfur dioxygenase [H]

Number of amino acids: Translated: 412; Mature: 411

Protein sequence:

>412_residues
MTQTTGSNPLSLGTDYETLANRFRPIFREIGAGSVEREKARALPHEPIAWLQKAGFGAVRVPVEYGGAGASISQLFQLLI
ELAEADSNIPQALRAHFAFVEDRLNAPPGADRDQWFARFVAGDLVGNGWTEVGAVKIGDVMTKVSPQGDGFVLNGTKYYS
TGSIFADWIDVYAQRSDTGADVIAVVDARHAGVRHSDDWDGFGQRTTGSGTSVYDNVPLPATHVIPFEQRFKYQTAFYQL
VLLAVLAGIGRAVERDIAQEVRDRKRVFSHGNAGSVSQDSQVQQVVGQIAAQVYAAEAATLRSAEPLQRAYVARFGNDPQ
REKDANIAAEIETAKAQVIVSELVLRATSDLFNALGASGVSVNKALDRHWRNARTAASHNPLIYKARIVGDWRINGTEPP
FVWQIGSGKGNA

Sequences:

>Translated_412_residues
MTQTTGSNPLSLGTDYETLANRFRPIFREIGAGSVEREKARALPHEPIAWLQKAGFGAVRVPVEYGGAGASISQLFQLLI
ELAEADSNIPQALRAHFAFVEDRLNAPPGADRDQWFARFVAGDLVGNGWTEVGAVKIGDVMTKVSPQGDGFVLNGTKYYS
TGSIFADWIDVYAQRSDTGADVIAVVDARHAGVRHSDDWDGFGQRTTGSGTSVYDNVPLPATHVIPFEQRFKYQTAFYQL
VLLAVLAGIGRAVERDIAQEVRDRKRVFSHGNAGSVSQDSQVQQVVGQIAAQVYAAEAATLRSAEPLQRAYVARFGNDPQ
REKDANIAAEIETAKAQVIVSELVLRATSDLFNALGASGVSVNKALDRHWRNARTAASHNPLIYKARIVGDWRINGTEPP
FVWQIGSGKGNA
>Mature_411_residues
TQTTGSNPLSLGTDYETLANRFRPIFREIGAGSVEREKARALPHEPIAWLQKAGFGAVRVPVEYGGAGASISQLFQLLIE
LAEADSNIPQALRAHFAFVEDRLNAPPGADRDQWFARFVAGDLVGNGWTEVGAVKIGDVMTKVSPQGDGFVLNGTKYYST
GSIFADWIDVYAQRSDTGADVIAVVDARHAGVRHSDDWDGFGQRTTGSGTSVYDNVPLPATHVIPFEQRFKYQTAFYQLV
LLAVLAGIGRAVERDIAQEVRDRKRVFSHGNAGSVSQDSQVQQVVGQIAAQVYAAEAATLRSAEPLQRAYVARFGNDPQR
EKDANIAAEIETAKAQVIVSELVLRATSDLFNALGASGVSVNKALDRHWRNARTAASHNPLIYKARIVGDWRINGTEPPF
VWQIGSGKGNA

Specific function: Part of a pathway to remove covalently bound sulfur from dibenzothiophene (DBT) without breaking carbon-carbon bonds. Sulfur dioxygenase which converts DBT to DBT-sulfone (DBTO2 or DBT 5,5-dioxide) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013107
- InterPro:   IPR006092
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF08028 Acyl-CoA_dh_2; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 44693; Mature: 44562

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
0.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQTTGSNPLSLGTDYETLANRFRPIFREIGAGSVEREKARALPHEPIAWLQKAGFGAVR
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHCCCCEEE
VPVEYGGAGASISQLFQLLIELAEADSNIPQALRAHFAFVEDRLNAPPGADRDQWFARFV
EEHEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
AGDLVGNGWTEVGAVKIGDVMTKVSPQGDGFVLNGTKYYSTGSIFADWIDVYAQRSDTGA
HHHHCCCCCHHHCCEEHHHHHHHCCCCCCCEEECCCEEECCCHHHHHHHHHHHHCCCCCC
DVIAVVDARHAGVRHSDDWDGFGQRTTGSGTSVYDNVPLPATHVIPFEQRFKYQTAFYQL
CEEEEEECHHCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEECCHHHHHHHHHHHHHH
VLLAVLAGIGRAVERDIAQEVRDRKRVFSHGNAGSVSQDSQVQQVVGQIAAQVYAAEAAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LRSAEPLQRAYVARFGNDPQREKDANIAAEIETAKAQVIVSELVLRATSDLFNALGASGV
HCCCHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SVNKALDRHWRNARTAASHNPLIYKARIVGDWRINGTEPPFVWQIGSGKGNA
HHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCCCCEEEEECCCCCCC
>Mature Secondary Structure 
TQTTGSNPLSLGTDYETLANRFRPIFREIGAGSVEREKARALPHEPIAWLQKAGFGAVR
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHCCCCEEE
VPVEYGGAGASISQLFQLLIELAEADSNIPQALRAHFAFVEDRLNAPPGADRDQWFARFV
EEHEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
AGDLVGNGWTEVGAVKIGDVMTKVSPQGDGFVLNGTKYYSTGSIFADWIDVYAQRSDTGA
HHHHCCCCCHHHCCEEHHHHHHHCCCCCCCEEECCCEEECCCHHHHHHHHHHHHCCCCCC
DVIAVVDARHAGVRHSDDWDGFGQRTTGSGTSVYDNVPLPATHVIPFEQRFKYQTAFYQL
CEEEEEECHHCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEECCHHHHHHHHHHHHHH
VLLAVLAGIGRAVERDIAQEVRDRKRVFSHGNAGSVSQDSQVQQVVGQIAAQVYAAEAAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LRSAEPLQRAYVARFGNDPQREKDANIAAEIETAKAQVIVSELVLRATSDLFNALGASGV
HCCCHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SVNKALDRHWRNARTAASHNPLIYKARIVGDWRINGTEPPFVWQIGSGKGNA
HHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961424; 7574582 [H]