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The map label for this gene is 66046110

Identifier: 66046110

GI number: 66046110

Start: 3454996

End: 3455427

Strand: Direct

Name: 66046110

Synonym: Psyr_2879

Alternate gene names: NA

Gene position: 3454996-3455427 (Clockwise)

Preceding gene: 66046104

Following gene: 66046111

Centisome position: 56.7

GC content: 56.02

Gene sequence:

>432_bases
ATGAAACATTCCTACGCCGCTGCACTGCTTGCTCTTTCAATGCCAGGCCTCGCTCACGCAGGCGACGCGCTACCCACCTA
CTCCGCCATTACCCAGGCATTGAATACCGGAGAATCGGTCGCCGTGGTGATCGACCTGGGACAATGCAAATCCTCGATCG
CCGGTGCCGAGCCGTCCAAAACCAAAGGCGGCAAACGCATCGATGCCTACCGCATCACCCCCGACGGCACCCTGGCGTTT
TCGGACACTCACTTCAGCCTCGATCGCGATAACAAGCCCATCGAGCAATTCATTCGCTATCAGGTACGCTCGAACGGCAC
AGCCACATTCAGCATGACCACGCTGAATGTTCCTGGCTATCAACAAGTGGGTACGCCGGTGAGTTATGAGTGTGCGATCA
GCAAAGGACTGAGCTTTTTTGTCAGCCAGTAA

Upstream 100 bases:

>100_bases
GGGCCCACCTGAATCGAAGCTTATGGTAGGTTTCGCGACGCTCGATAATCGCGAGATGGACGGGTCTTTTCCCCCTTCAG
ACTGACTTCCTGGAGCTGCC

Downstream 100 bases:

>100_bases
GGTTCACGCCTTAACCGAATAAACCAGATAGATATTCGGCGTGAGCGACAGACCCTCCTCACGCCTTTGACAGTAACGCT
CGAGCTGCTTGTCGGGAGAC

Product: VirK

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MKHSYAAALLALSMPGLAHAGDALPTYSAITQALNTGESVAVVIDLGQCKSSIAGAEPSKTKGGKRIDAYRITPDGTLAF
SDTHFSLDRDNKPIEQFIRYQVRSNGTATFSMTTLNVPGYQQVGTPVSYECAISKGLSFFVSQ

Sequences:

>Translated_143_residues
MKHSYAAALLALSMPGLAHAGDALPTYSAITQALNTGESVAVVIDLGQCKSSIAGAEPSKTKGGKRIDAYRITPDGTLAF
SDTHFSLDRDNKPIEQFIRYQVRSNGTATFSMTTLNVPGYQQVGTPVSYECAISKGLSFFVSQ
>Mature_143_residues
MKHSYAAALLALSMPGLAHAGDALPTYSAITQALNTGESVAVVIDLGQCKSSIAGAEPSKTKGGKRIDAYRITPDGTLAF
SDTHFSLDRDNKPIEQFIRYQVRSNGTATFSMTTLNVPGYQQVGTPVSYECAISKGLSFFVSQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010694 [H]

Pfam domain/function: PF06903 VirK [H]

EC number: NA

Molecular weight: Translated: 15209; Mature: 15209

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHSYAAALLALSMPGLAHAGDALPTYSAITQALNTGESVAVVIDLGQCKSSIAGAEPSK
CCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCHHHHHHCCCCCCC
TKGGKRIDAYRITPDGTLAFSDTHFSLDRDNKPIEQFIRYQVRSNGTATFSMTTLNVPGY
CCCCCEEEEEEECCCCEEEECCCEEEECCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCC
QQVGTPVSYECAISKGLSFFVSQ
HHHCCCCEEEHHHHCCCEEEECC
>Mature Secondary Structure
MKHSYAAALLALSMPGLAHAGDALPTYSAITQALNTGESVAVVIDLGQCKSSIAGAEPSK
CCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCHHHHHHCCCCCCC
TKGGKRIDAYRITPDGTLAFSDTHFSLDRDNKPIEQFIRYQVRSNGTATFSMTTLNVPGY
CCCCCEEEEEEECCCCEEEECCCEEEECCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCC
QQVGTPVSYECAISKGLSFFVSQ
HHHCCCCEEEHHHHCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2708311 [H]