| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66046057
Identifier: 66046057
GI number: 66046057
Start: 3395112
End: 3396773
Strand: Direct
Name: 66046057
Synonym: Psyr_2821
Alternate gene names: NA
Gene position: 3395112-3396773 (Clockwise)
Preceding gene: 66046056
Following gene: 66046058
Centisome position: 55.72
GC content: 59.33
Gene sequence:
>1662_bases ATGAAGACGCATAAAGTCACCCAGGGCAGTGCCGAATGGCACGCGCTCCGCGCCAACTATCGCACCGCGTCTGAAGCACC GGTTATGATGGGCGCATCCAAGCAGATGAAGCGCACCGAGCTGCTTCATGCCAAGAAGACCGGGCTCGACCGGGACATTT CGTGGTGGGTCCAGAAGTACTTGTTCGACAAGGGTCACGAAGCCGAAGCGCTGGCGCGACCAATTCTCGAAGGTCGAATC GGCGAAGACCTGTTCCCGGTTGTGGGCACCGAAGGTGACCTGCTGGCCTCCCTCGACGGCTGCACAATGATGGGCGAGAT CGTTTTCGAGCACAAAATGTGGAACGAGCAGCTCGCCGCCGACGTGCGTGCGGGCGATCTGGATGCGCATTACTACTGGC AGCTGGAGCAGCAACTGCTGGTGTCAGGTGCTGAGAAAGTGATTTTCGTTTGCTCGGACGGGACCGAAGACAACTTCGTC TCGATGGAGTACTTCCCGGTGAACGGTCGGGCGGCGAAACTGGTCGCCGGCTGGAAACAGTTCGAAGTCGACCTTGAAGC GTATGAGCCAACTGAGGCCGTGGTGGAGGCAGTTGGGAAGACTCCGGACGCGCTGCCAGCGCTGCGCATCGAAGTAACCG GAATGGTCACTGCGAGCAACCTGGAGCAGTTCAAGGCCCATTCGCTGGCCGTGTTTTCGGCGATCAACACTGACCTGCAG ACCGACCAGCACTTCGCTGATGCAGAGAAAACAGTGAAGTGGTGTGGCGAGGTCGAGGAGCGCCTGGAAGCAGCCAAGCA ACATGCGCTGAGCCAGACGGAAACCATCGACGCCCTCTTCCGCACCATCGACGAAATATCGGAGCAGGCCCGTCGCAAAC GGCTTGAGCTGGACAAACTGGTGAAAGCTCGCAAGGTGGCCATTCGCGAAGAGATCGTTCTGAAAGCGAAAGCAGCGCTG CGTGATCATCTGGACAAGATCAACACCTCGTTCGGCGGCAAGGTGCGGCTGCCGGAGATCCCCGCGGACTTCGCCGGCGC GATCAAAGGCAAAAAAAATATCGCCAGTCTGCGTGACGCCGCCGACTCTGAACTGGCCCGGGCCAAGATCGAGGCCAGCC AGATCGGCGACGGTATCCGCGCCAACTTGGAAAGCTTGCGCTCGCTCGCCGTGGATCATGCGTTTCTGTTCAACGATGCT CAGCAGATCGTGCTCAAGAACAATGACGACCTGGTGGCCCTCATCAAGGTGCGGATCAACGAGCACAAGCAGGCCGAGGA AGCGAAAGAGCTGGCGCAGCGTGAACGTATTCGTGCTGAAGAATCAGCGAAGCTTGCGGCTGCCGCCGAAGCGGAACAAG TTGCCGAAGCGGAAAAGGCAACAGCCAACGCGCCCGCGCCGCAAGCTGCTGAGGCATCCAAACCAGTCGAACAACCAGCT CCGAGAATGTCGGCCGTCACCCCATCTGCGAAGGTGCCGCCCAAGCCTACAAAGCTCGAAGCGAACGTCACCGACCTTCA TGCGCTGGTAAAAGCCGTCTACGAAGGTCGTGCGCCGATATCGGTCCTCACAGTGAACTGGGGCGCGCTGGACGACCTTG TCCACATTCAAGGCGCTGACTTCCAAATGGACGGAGTAACCATCACGCAGGTGGCAGCATGA
Upstream 100 bases:
>100_bases ACACCGAAAGCCTGATCGCCTTCTTGGAATCGAAATACACCCTCAGTGCCGATCAGATCGACCGAATCAACCAGATGGCT CCTATCGCCGGAGAAACCGC
Downstream 100 bases:
>100_bases TGACTACCGAGCTGAGCGCCATCCTGCGCAACAGTGCCAAATCATCCGAGCTGGCCGCCGCGGTTAGAGAATTCCAGCGC AGCGGTGGCACGGTATGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 553; Mature: 553
Protein sequence:
>553_residues MKTHKVTQGSAEWHALRANYRTASEAPVMMGASKQMKRTELLHAKKTGLDRDISWWVQKYLFDKGHEAEALARPILEGRI GEDLFPVVGTEGDLLASLDGCTMMGEIVFEHKMWNEQLAADVRAGDLDAHYYWQLEQQLLVSGAEKVIFVCSDGTEDNFV SMEYFPVNGRAAKLVAGWKQFEVDLEAYEPTEAVVEAVGKTPDALPALRIEVTGMVTASNLEQFKAHSLAVFSAINTDLQ TDQHFADAEKTVKWCGEVEERLEAAKQHALSQTETIDALFRTIDEISEQARRKRLELDKLVKARKVAIREEIVLKAKAAL RDHLDKINTSFGGKVRLPEIPADFAGAIKGKKNIASLRDAADSELARAKIEASQIGDGIRANLESLRSLAVDHAFLFNDA QQIVLKNNDDLVALIKVRINEHKQAEEAKELAQRERIRAEESAKLAAAAEAEQVAEAEKATANAPAPQAAEASKPVEQPA PRMSAVTPSAKVPPKPTKLEANVTDLHALVKAVYEGRAPISVLTVNWGALDDLVHIQGADFQMDGVTITQVAA
Sequences:
>Translated_553_residues MKTHKVTQGSAEWHALRANYRTASEAPVMMGASKQMKRTELLHAKKTGLDRDISWWVQKYLFDKGHEAEALARPILEGRI GEDLFPVVGTEGDLLASLDGCTMMGEIVFEHKMWNEQLAADVRAGDLDAHYYWQLEQQLLVSGAEKVIFVCSDGTEDNFV SMEYFPVNGRAAKLVAGWKQFEVDLEAYEPTEAVVEAVGKTPDALPALRIEVTGMVTASNLEQFKAHSLAVFSAINTDLQ TDQHFADAEKTVKWCGEVEERLEAAKQHALSQTETIDALFRTIDEISEQARRKRLELDKLVKARKVAIREEIVLKAKAAL RDHLDKINTSFGGKVRLPEIPADFAGAIKGKKNIASLRDAADSELARAKIEASQIGDGIRANLESLRSLAVDHAFLFNDA QQIVLKNNDDLVALIKVRINEHKQAEEAKELAQRERIRAEESAKLAAAAEAEQVAEAEKATANAPAPQAAEASKPVEQPA PRMSAVTPSAKVPPKPTKLEANVTDLHALVKAVYEGRAPISVLTVNWGALDDLVHIQGADFQMDGVTITQVAA >Mature_553_residues MKTHKVTQGSAEWHALRANYRTASEAPVMMGASKQMKRTELLHAKKTGLDRDISWWVQKYLFDKGHEAEALARPILEGRI GEDLFPVVGTEGDLLASLDGCTMMGEIVFEHKMWNEQLAADVRAGDLDAHYYWQLEQQLLVSGAEKVIFVCSDGTEDNFV SMEYFPVNGRAAKLVAGWKQFEVDLEAYEPTEAVVEAVGKTPDALPALRIEVTGMVTASNLEQFKAHSLAVFSAINTDLQ TDQHFADAEKTVKWCGEVEERLEAAKQHALSQTETIDALFRTIDEISEQARRKRLELDKLVKARKVAIREEIVLKAKAAL RDHLDKINTSFGGKVRLPEIPADFAGAIKGKKNIASLRDAADSELARAKIEASQIGDGIRANLESLRSLAVDHAFLFNDA QQIVLKNNDDLVALIKVRINEHKQAEEAKELAQRERIRAEESAKLAAAAEAEQVAEAEKATANAPAPQAAEASKPVEQPA PRMSAVTPSAKVPPKPTKLEANVTDLHALVKAVYEGRAPISVLTVNWGALDDLVHIQGADFQMDGVTITQVAA
Specific function: Unknown
COG id: COG5377
COG function: function code L; Phage-related protein, predicted endonuclease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60730; Mature: 60730
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTHKVTQGSAEWHALRANYRTASEAPVMMGASKQMKRTELLHAKKTGLDRDISWWVQKY CCCCCCCCCCCHHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHH LFDKGHEAEALARPILEGRIGEDLFPVVGTEGDLLASLDGCTMMGEIVFEHKMWNEQLAA HHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHH DVRAGDLDAHYYWQLEQQLLVSGAEKVIFVCSDGTEDNFVSMEYFPVNGRAAKLVAGWKQ HCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEECCCCHHHHHHCCHH FEVDLEAYEPTEAVVEAVGKTPDALPALRIEVTGMVTASNLEQFKAHSLAVFSAINTDLQ EEEEEECCCCHHHHHHHHCCCCCCCCEEEEEEEEEEEHHHHHHHHHHHHHHHHHHCCCCC TDQHFADAEKTVKWCGEVEERLEAAKQHALSQTETIDALFRTIDEISEQARRKRLELDKL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VKARKVAIREEIVLKAKAALRDHLDKINTSFGGKVRLPEIPADFAGAIKGKKNIASLRDA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHCCCHHHHHHHHH ADSELARAKIEASQIGDGIRANLESLRSLAVDHAFLFNDAQQIVLKNNDDLVALIKVRIN HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEEECC EHKQAEEAKELAQRERIRAEESAKLAAAAEAEQVAEAEKATANAPAPQAAEASKPVEQPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC PRMSAVTPSAKVPPKPTKLEANVTDLHALVKAVYEGRAPISVLTVNWGALDDLVHIQGAD CCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHEECCCC FQMDGVTITQVAA EEECCEEEEEECC >Mature Secondary Structure MKTHKVTQGSAEWHALRANYRTASEAPVMMGASKQMKRTELLHAKKTGLDRDISWWVQKY CCCCCCCCCCCHHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHH LFDKGHEAEALARPILEGRIGEDLFPVVGTEGDLLASLDGCTMMGEIVFEHKMWNEQLAA HHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHH DVRAGDLDAHYYWQLEQQLLVSGAEKVIFVCSDGTEDNFVSMEYFPVNGRAAKLVAGWKQ HCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEECCCCHHHHHHCCHH FEVDLEAYEPTEAVVEAVGKTPDALPALRIEVTGMVTASNLEQFKAHSLAVFSAINTDLQ EEEEEECCCCHHHHHHHHCCCCCCCCEEEEEEEEEEEHHHHHHHHHHHHHHHHHHCCCCC TDQHFADAEKTVKWCGEVEERLEAAKQHALSQTETIDALFRTIDEISEQARRKRLELDKL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VKARKVAIREEIVLKAKAALRDHLDKINTSFGGKVRLPEIPADFAGAIKGKKNIASLRDA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHCCCHHHHHHHHH ADSELARAKIEASQIGDGIRANLESLRSLAVDHAFLFNDAQQIVLKNNDDLVALIKVRIN HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEEECC EHKQAEEAKELAQRERIRAEESAKLAAAAEAEQVAEAEKATANAPAPQAAEASKPVEQPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC PRMSAVTPSAKVPPKPTKLEANVTDLHALVKAVYEGRAPISVLTVNWGALDDLVHIQGAD CCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHEECCCC FQMDGVTITQVAA EEECCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA