| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66046056
Identifier: 66046056
GI number: 66046056
Start: 3394228
End: 3395115
Strand: Direct
Name: 66046056
Synonym: Psyr_2820
Alternate gene names: NA
Gene position: 3394228-3395115 (Clockwise)
Preceding gene: 66046055
Following gene: 66046057
Centisome position: 55.7
GC content: 59.23
Gene sequence:
>888_bases ATGTCCGCAAGAAACGTTGCGTCCGTATCGCACGATCAAAATTTGCATGTGCTTCCGCATGCGGCCACCTCGACCAGCGC CTTGGTCCTAGACGGCGACAGCCTGGACAAGATGATGCGCCTGGCCGAGGTCATGGCGACCGGGCGAGCAACTCTGCCGA AGCACTTCAACGGCAACTCCGCCGATTGCCTGGCCGTCGTCATGCAGGCCATGCAGTGGAGGATGAACCCGTTTGCCGTC GCACAGAAAACCCATCTGGTGAATGGCGTGCTCGGTTACGAGGCGCAGCTGGTCAACGCCGTGATTACAACCTGCGCACC TGTCGTGGATCGCTTGCACTACGAGTGGTACGGCAACTGGGAAAAGGTCATCGGCAAGTTTGTGATCAAAAACAGCGACA AGGGTGAGTACCGGCAGCCAGGCTGGAAGCTTGCCGACGAGGAAGGCCTGGGCGTGAAGGTTTGGGCGACATTCCGCGGA GAAGACGAGCCCAGGGTGTTGGAGCTGCTACTGGCCCAGGCGCGTACACGCAACAGCACGCTCTGGGCCGACGATCCTCG CCAGCAGCTCGCGTACCTGGCAACCAAACGCTGGTCCCGCCTCTACTGCCCGGACGTGATTCTGGGGGTTTACAGCCCAG ATGAGCTGGAGGAAAGCACCCCTCGGTACCGTGATGTTTCCCCACAGCCGGAGCAGCAAGGGTCCGAGCTTCCCGCCTAC GAGGACGAAAAGTTCAAAACGATGTTTCCCAAATGGCAGGAGGGAATCGACACCGGAAAGACCGACACCGAAAGCCTGAT CGCCTTCTTGGAATCGAAATACACCCTCAGTGCCGATCAGATCGACCGAATCAACCAGATGGCTCCTATCGCCGGAGAAA CCGCATGA
Upstream 100 bases:
>100_bases GCAACCGCTTGGATGCTTGCCAGCGCCTACGCATCGCACATCACTCAGTAAGCCCATTTTTATCCAATCGCAGCGCCCGC ATGGAGCGCGAGGATTTCCT
Downstream 100 bases:
>100_bases AGACGCATAAAGTCACCCAGGGCAGTGCCGAATGGCACGCGCTCCGCGCCAACTATCGCACCGCGTCTGAAGCACCGGTT ATGATGGGCGCATCCAAGCA
Product: RecT protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MSARNVASVSHDQNLHVLPHAATSTSALVLDGDSLDKMMRLAEVMATGRATLPKHFNGNSADCLAVVMQAMQWRMNPFAV AQKTHLVNGVLGYEAQLVNAVITTCAPVVDRLHYEWYGNWEKVIGKFVIKNSDKGEYRQPGWKLADEEGLGVKVWATFRG EDEPRVLELLLAQARTRNSTLWADDPRQQLAYLATKRWSRLYCPDVILGVYSPDELEESTPRYRDVSPQPEQQGSELPAY EDEKFKTMFPKWQEGIDTGKTDTESLIAFLESKYTLSADQIDRINQMAPIAGETA
Sequences:
>Translated_295_residues MSARNVASVSHDQNLHVLPHAATSTSALVLDGDSLDKMMRLAEVMATGRATLPKHFNGNSADCLAVVMQAMQWRMNPFAV AQKTHLVNGVLGYEAQLVNAVITTCAPVVDRLHYEWYGNWEKVIGKFVIKNSDKGEYRQPGWKLADEEGLGVKVWATFRG EDEPRVLELLLAQARTRNSTLWADDPRQQLAYLATKRWSRLYCPDVILGVYSPDELEESTPRYRDVSPQPEQQGSELPAY EDEKFKTMFPKWQEGIDTGKTDTESLIAFLESKYTLSADQIDRINQMAPIAGETA >Mature_294_residues SARNVASVSHDQNLHVLPHAATSTSALVLDGDSLDKMMRLAEVMATGRATLPKHFNGNSADCLAVVMQAMQWRMNPFAVA QKTHLVNGVLGYEAQLVNAVITTCAPVVDRLHYEWYGNWEKVIGKFVIKNSDKGEYRQPGWKLADEEGLGVKVWATFRGE DEPRVLELLLAQARTRNSTLWADDPRQQLAYLATKRWSRLYCPDVILGVYSPDELEESTPRYRDVSPQPEQQGSELPAYE DEKFKTMFPKWQEGIDTGKTDTESLIAFLESKYTLSADQIDRINQMAPIAGETA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33136; Mature: 33005
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARNVASVSHDQNLHVLPHAATSTSALVLDGDSLDKMMRLAEVMATGRATLPKHFNGNS CCCCCCCCCCCCCCEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCC ADCLAVVMQAMQWRMNPFAVAQKTHLVNGVLGYEAQLVNAVITTCAPVVDRLHYEWYGNW HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH EKVIGKFVIKNSDKGEYRQPGWKLADEEGLGVKVWATFRGEDEPRVLELLLAQARTRNST HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCC LWADDPRQQLAYLATKRWSRLYCPDVILGVYSPDELEESTPRYRDVSPQPEQQGSELPAY CCCCCHHHHHHHHHHHHHCCCCCCHHEEECCCCHHHHHCCCCCCCCCCCCHHCCCCCCCC EDEKFKTMFPKWQEGIDTGKTDTESLIAFLESKYTLSADQIDRINQMAPIAGETA CCCHHHHHCCHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SARNVASVSHDQNLHVLPHAATSTSALVLDGDSLDKMMRLAEVMATGRATLPKHFNGNS CCCCCCCCCCCCCEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCC ADCLAVVMQAMQWRMNPFAVAQKTHLVNGVLGYEAQLVNAVITTCAPVVDRLHYEWYGNW HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH EKVIGKFVIKNSDKGEYRQPGWKLADEEGLGVKVWATFRGEDEPRVLELLLAQARTRNST HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCC LWADDPRQQLAYLATKRWSRLYCPDVILGVYSPDELEESTPRYRDVSPQPEQQGSELPAY CCCCCHHHHHHHHHHHHHCCCCCCHHEEECCCCHHHHHCCCCCCCCCCCCHHCCCCCCCC EDEKFKTMFPKWQEGIDTGKTDTESLIAFLESKYTLSADQIDRINQMAPIAGETA CCCHHHHHCCHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA