| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66046000
Identifier: 66046000
GI number: 66046000
Start: 3351260
End: 3352504
Strand: Reverse
Name: 66046000
Synonym: Psyr_2764
Alternate gene names: NA
Gene position: 3352504-3351260 (Counterclockwise)
Preceding gene: 66046001
Following gene: 66045998
Centisome position: 55.02
GC content: 63.29
Gene sequence:
>1245_bases ATGAGCCTTCTGGTAAACGCGATCCAACGCCGCCAACCGATCCGGCGTGGCCTGGGCCTGCTCGGCGATAGCTTCTCGGG CAACTGCCACACCATCGCGACGACGGCCTTCGGTACCGAGGCGTATGGCTTCGCGGCCTGGATCGCGGCGCGCACTGGCC TGTTTCCCAGCTACCTCGACAACCAGGGCAAGCTCGGCGACCACACCGGGCAGTTTCTGGCCAGACTTCCGGCCTGCATT GCGTCGTCCACTGCCGACCTGTGGCTGCTGCTGTCGCGGACCAACGACAGCACCACGGCAGGTATGAGCTTGGCCGACAC GAAAGCCAACGTGATGAAGATCGTCACCGCGTTCCTGGACACGCCCGGCAAGTACCTGATCGTCGGCACCGGCACGCCGC GCTTCGGCAACAGGGCGTTGACCGGGCAGGCGCTGGCCGATGCGAGCGCTTACAAAGACTGGGTGGTGAGCTATGTCAGC CAGTTCGTACCGGTCGTGAATATTTGGGACGGCTTCACCGAAGCGATGACTGTCGAGGGCCTGCATCCCAATATCCTGGG TGCCGAGTTCATCAGTTCGCGTGTGGTGCCGATCATCACCGCCAACTTCGAATTTCCCGGTATTCCGCTGCCCACTGACG CTGGCGACATTTACTCGGCCATCCGTCCGTTCGGCTGCCTCAATGCCAACCCGCTGCTGGCGGGCGCTAGCGGCGCGCTA CCGGCTGGCGTGAACGCTGTGGCCGGGTCGGTGCTGGCGGACGGCTACAAGGCTGTGGGCTCTGGCCTGGCCGGGATCAC CACGCGGTGGTACAAGGAGCCTGCCGCCTATGGTGAGGCGCAGTGCATCGAGCTGCGTGGCAACATGGCGGCTGCGGGCG GCTACATCTACATGCAACCCACGGCCAACGTGGTACAGACCAACCTGGCGGCCGGCGACGTTATCGAAATGGTGTCGGCG GTCGAGATCGACGGCTCATCGCGCGGGATACTGGCCTGGGAAGCTGAGTTGACCATCACCAAGACGGTCAATGGCGCATC GTCCACGTCCTACTATCGGTCGATGGACAAGTACCAAGAACCGTTCACCATGCCGGCCAGCTTTTCCGGTGGGCTGGAAA CGCAGCGCGGCACGATTGACCTGACTGAAACCGTTATCACCTCGCGCATGGGCCTATACCTGGCTGCAGGCGTGCCGCAG GACTCGACGGTCAAGGCCGCGCAGTTCGGGATACGCAAGGTTTAA
Upstream 100 bases:
>100_bases TGACTGACACCTTCACCAAAGATGGCGGCTACCTGCTGCAGCTCGGAAATTCTTCGACGCGCATTACACCCAATGGTGGC GCTGTCTTCGAGGTGACTCG
Downstream 100 bases:
>100_bases ATGCTTGGGCTGCCTTGGGCGTATGAATTTATTCGACTTCCTCTATCAGTTCCGCCCCTTGGTTCCGGACGTTACCCACG GCCTTGCCAACCGTATACCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 414; Mature: 413
Protein sequence:
>414_residues MSLLVNAIQRRQPIRRGLGLLGDSFSGNCHTIATTAFGTEAYGFAAWIAARTGLFPSYLDNQGKLGDHTGQFLARLPACI ASSTADLWLLLSRTNDSTTAGMSLADTKANVMKIVTAFLDTPGKYLIVGTGTPRFGNRALTGQALADASAYKDWVVSYVS QFVPVVNIWDGFTEAMTVEGLHPNILGAEFISSRVVPIITANFEFPGIPLPTDAGDIYSAIRPFGCLNANPLLAGASGAL PAGVNAVAGSVLADGYKAVGSGLAGITTRWYKEPAAYGEAQCIELRGNMAAAGGYIYMQPTANVVQTNLAAGDVIEMVSA VEIDGSSRGILAWEAELTITKTVNGASSTSYYRSMDKYQEPFTMPASFSGGLETQRGTIDLTETVITSRMGLYLAAGVPQ DSTVKAAQFGIRKV
Sequences:
>Translated_414_residues MSLLVNAIQRRQPIRRGLGLLGDSFSGNCHTIATTAFGTEAYGFAAWIAARTGLFPSYLDNQGKLGDHTGQFLARLPACI ASSTADLWLLLSRTNDSTTAGMSLADTKANVMKIVTAFLDTPGKYLIVGTGTPRFGNRALTGQALADASAYKDWVVSYVS QFVPVVNIWDGFTEAMTVEGLHPNILGAEFISSRVVPIITANFEFPGIPLPTDAGDIYSAIRPFGCLNANPLLAGASGAL PAGVNAVAGSVLADGYKAVGSGLAGITTRWYKEPAAYGEAQCIELRGNMAAAGGYIYMQPTANVVQTNLAAGDVIEMVSA VEIDGSSRGILAWEAELTITKTVNGASSTSYYRSMDKYQEPFTMPASFSGGLETQRGTIDLTETVITSRMGLYLAAGVPQ DSTVKAAQFGIRKV >Mature_413_residues SLLVNAIQRRQPIRRGLGLLGDSFSGNCHTIATTAFGTEAYGFAAWIAARTGLFPSYLDNQGKLGDHTGQFLARLPACIA SSTADLWLLLSRTNDSTTAGMSLADTKANVMKIVTAFLDTPGKYLIVGTGTPRFGNRALTGQALADASAYKDWVVSYVSQ FVPVVNIWDGFTEAMTVEGLHPNILGAEFISSRVVPIITANFEFPGIPLPTDAGDIYSAIRPFGCLNANPLLAGASGALP AGVNAVAGSVLADGYKAVGSGLAGITTRWYKEPAAYGEAQCIELRGNMAAAGGYIYMQPTANVVQTNLAAGDVIEMVSAV EIDGSSRGILAWEAELTITKTVNGASSTSYYRSMDKYQEPFTMPASFSGGLETQRGTIDLTETVITSRMGLYLAAGVPQD STVKAAQFGIRKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43632; Mature: 43501
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLVNAIQRRQPIRRGLGLLGDSFSGNCHTIATTAFGTEAYGFAAWIAARTGLFPSYLD CHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCHHHHC NQGKLGDHTGQFLARLPACIASSTADLWLLLSRTNDSTTAGMSLADTKANVMKIVTAFLD CCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEHHHHHHHHHHHHHHHC TPGKYLIVGTGTPRFGNRALTGQALADASAYKDWVVSYVSQFVPVVNIWDGFTEAMTVEG CCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHEEECC LHPNILGAEFISSRVVPIITANFEFPGIPLPTDAGDIYSAIRPFGCLNANPLLAGASGAL CCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCEEECCCCCC PAGVNAVAGSVLADGYKAVGSGLAGITTRWYKEPAAYGEAQCIELRGNMAAAGGYIYMQP CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEEECCCEEECCCEEEECC TANVVQTNLAAGDVIEMVSAVEIDGSSRGILAWEAELTITKTVNGASSTSYYRSMDKYQE CCHHHHHCCCHHHHHHHHHHEEECCCCCCEEEEEEEEEEEEECCCCCCHHHHHHHHHHCC PFTMPASFSGGLETQRGTIDLTETVITSRMGLYLAAGVPQDSTVKAAQFGIRKV CCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCEEEEECCCCCCCHHHHHHCCCCC >Mature Secondary Structure SLLVNAIQRRQPIRRGLGLLGDSFSGNCHTIATTAFGTEAYGFAAWIAARTGLFPSYLD HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCHHHHC NQGKLGDHTGQFLARLPACIASSTADLWLLLSRTNDSTTAGMSLADTKANVMKIVTAFLD CCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEHHHHHHHHHHHHHHHC TPGKYLIVGTGTPRFGNRALTGQALADASAYKDWVVSYVSQFVPVVNIWDGFTEAMTVEG CCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHEEECC LHPNILGAEFISSRVVPIITANFEFPGIPLPTDAGDIYSAIRPFGCLNANPLLAGASGAL CCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCEEECCCCCC PAGVNAVAGSVLADGYKAVGSGLAGITTRWYKEPAAYGEAQCIELRGNMAAAGGYIYMQP CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEEECCCEEECCCEEEECC TANVVQTNLAAGDVIEMVSAVEIDGSSRGILAWEAELTITKTVNGASSTSYYRSMDKYQE CCHHHHHCCCHHHHHHHHHHEEECCCCCCEEEEEEEEEEEEECCCCCCHHHHHHHHHHCC PFTMPASFSGGLETQRGTIDLTETVITSRMGLYLAAGVPQDSTVKAAQFGIRKV CCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCEEEEECCCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA