| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66045980
Identifier: 66045980
GI number: 66045980
Start: 3329966
End: 3331708
Strand: Reverse
Name: 66045980
Synonym: Psyr_2744
Alternate gene names: NA
Gene position: 3331708-3329966 (Counterclockwise)
Preceding gene: 66045981
Following gene: 66045979
Centisome position: 54.67
GC content: 63.8
Gene sequence:
>1743_bases ATGCAGACGCATACCGTCGCCATTATCGGCATGGGCTCGCGCGGATTGAGCATTCTGGAGCAGTTGATCGGCATGAGTCG CCAAGACGTGCGGCAACCGCTGCGTATCGACGTGTTCGATCCGCAGCCGCCGGGCAGCGGGCTGCACCTTGCGCAGCAGC CGGATTACCTGATGCTCAACACCATGGCCGGTCAGTTGTCGGCGTTTTCCTCGGCTTTCCCGGCGTGTGAACCGCCAGGC CCGACCTTTTTGCAATGGTGCAGCCGTGAGGATGTACGCCTGGACGCGCGCGGCCATGTCAGCCTGGATGGGCAGGGCAG AGCGGTGGCATTTGGCGACTTCGTGCCGCGTGCTCTGCTCGGGCGCTATTTGCAGGACAGTTATCGCTTTCTGCTGCAAC GCTGCCCGGCGCACGTGCAGGTGCGCCACCACGCCGAGCAGGTGCTGAGCTGCCAGCCAAGGTCGCAAACGCCGGGTTTC CGGCTGCGTACCGGCAGTCTGGCAATGAACGTCGACGGCGTGTTCCTCACCAGCGGACATGCGCCTGACCCCCACGTGCA GCAGGACGTCGGCGAGTGCGTGGTCATCGAAGGCCTGGGGCTGACCGCCATGGACACGCTGGCGCATCTGACTGAGGGGC GCGGCGGGCGCTACGTGCGCGATGGCGGCTTCGCCGGCTGGCGTTACCTGCCGTCCGGACGCGAGCCCAGGGTGTTGATG TGTTCCCGTAGCGGATTGCCGTTTCATGCCAGGCCGCAGTGGCATGCCTGCCGTCACGCACCGTTGCCGAGGCTGTTTTT CACGGCCGACGCCATAGCGCGTTTGCGCGAGCAGAGGGAAGGCGGGCGGCTCGACTTTCGCGCCGATGTGCTGCCCCTGA TCAAGGATGAAATGCGTGCCGTGTTTTATCAGGCCAGGGTCCGTATGGAGGCGCCTGGGCGGTTGGCCTCTGTTCAGCGC CTGCTGCGCGAGTCAATCAGCAGACCGGCAGTGTTTGCCCGTCTGGCAGAGCAGTGGGGTGAATTCGAGCCTGAGCACTG GCTGAGCACCCAGCCCTGGTCCGGCGCGCAAGACACATACGGGCAGTGGTTCGTCGACTGGATCAAACGTGACCTGGCCC TGAGTCGGCTGGGCACCGCGCACAGCCCGATCTGTCAGGCACTGGAGGTCTGGCGCGATTATCGCGACCTGTTGCGTCTG GTCGTCGATCGCAACGGCCTGACCGAATCCTCGACGCTGGATTTCTATGGCACCTGGGCGGGACTGAGTAACCGTCTGGT CGGCGGGCCGCAGAAGGAACGCCATGAAGACCTGCTGGCGTTGATCGAAGCCGGGGTCGTGACGCTCTTGCCGCCGATGA GTGACGTGCAAGAGCCACGCAATCGCCTGTCTGCCCGCGTCGTCCACAGCGGTGTGTCGGGCAGTCGTCATGGGTTGATC AACGATCTGCGCAAGCGCGGGCTGATTCGTGCCGCGCATGCCTGGCCTGCCGATGGCATCGACACCGACGCAGCGGGTCG CGCAATCGGTCGCGACGGTGAGGTGCAGCAGCGGCTCTGGGTTCTCGGGCCCGCCGTGGAAGGCTGCACGTTCTACAACC ACTACGTACCGACTCCTGATCCGACCTGTCGCGCGCTGATCGAGGCGCGCCGGGCAGTCGAGTCTTGTCTGGATACGCTG ACAAACAAAACTTCAAGTGGCATCACATTTCAGTTGAACAAAGCCATTCAAGCTTTTAATTAA
Upstream 100 bases:
>100_bases ACCTTGCTGTGGGGCAGCGGGTGTATCGCCAGGCGGTGGCCGAGGGCAGCGCTTTGCCGGTGCCGCAGTTCTTCTTTGAA TCGGCGCGCTGGTGATGGCC
Downstream 100 bases:
>100_bases AAAGGAATTATTACTATGCAAGAAATCACTTTGCTGACCGCCCTCGCTGGGGCGTTCATCGTGTTGATCATCAGCCCTGG TCCGAACTTTCTGGTCATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 580; Mature: 580
Protein sequence:
>580_residues MQTHTVAIIGMGSRGLSILEQLIGMSRQDVRQPLRIDVFDPQPPGSGLHLAQQPDYLMLNTMAGQLSAFSSAFPACEPPG PTFLQWCSREDVRLDARGHVSLDGQGRAVAFGDFVPRALLGRYLQDSYRFLLQRCPAHVQVRHHAEQVLSCQPRSQTPGF RLRTGSLAMNVDGVFLTSGHAPDPHVQQDVGECVVIEGLGLTAMDTLAHLTEGRGGRYVRDGGFAGWRYLPSGREPRVLM CSRSGLPFHARPQWHACRHAPLPRLFFTADAIARLREQREGGRLDFRADVLPLIKDEMRAVFYQARVRMEAPGRLASVQR LLRESISRPAVFARLAEQWGEFEPEHWLSTQPWSGAQDTYGQWFVDWIKRDLALSRLGTAHSPICQALEVWRDYRDLLRL VVDRNGLTESSTLDFYGTWAGLSNRLVGGPQKERHEDLLALIEAGVVTLLPPMSDVQEPRNRLSARVVHSGVSGSRHGLI NDLRKRGLIRAAHAWPADGIDTDAAGRAIGRDGEVQQRLWVLGPAVEGCTFYNHYVPTPDPTCRALIEARRAVESCLDTL TNKTSSGITFQLNKAIQAFN
Sequences:
>Translated_580_residues MQTHTVAIIGMGSRGLSILEQLIGMSRQDVRQPLRIDVFDPQPPGSGLHLAQQPDYLMLNTMAGQLSAFSSAFPACEPPG PTFLQWCSREDVRLDARGHVSLDGQGRAVAFGDFVPRALLGRYLQDSYRFLLQRCPAHVQVRHHAEQVLSCQPRSQTPGF RLRTGSLAMNVDGVFLTSGHAPDPHVQQDVGECVVIEGLGLTAMDTLAHLTEGRGGRYVRDGGFAGWRYLPSGREPRVLM CSRSGLPFHARPQWHACRHAPLPRLFFTADAIARLREQREGGRLDFRADVLPLIKDEMRAVFYQARVRMEAPGRLASVQR LLRESISRPAVFARLAEQWGEFEPEHWLSTQPWSGAQDTYGQWFVDWIKRDLALSRLGTAHSPICQALEVWRDYRDLLRL VVDRNGLTESSTLDFYGTWAGLSNRLVGGPQKERHEDLLALIEAGVVTLLPPMSDVQEPRNRLSARVVHSGVSGSRHGLI NDLRKRGLIRAAHAWPADGIDTDAAGRAIGRDGEVQQRLWVLGPAVEGCTFYNHYVPTPDPTCRALIEARRAVESCLDTL TNKTSSGITFQLNKAIQAFN >Mature_580_residues MQTHTVAIIGMGSRGLSILEQLIGMSRQDVRQPLRIDVFDPQPPGSGLHLAQQPDYLMLNTMAGQLSAFSSAFPACEPPG PTFLQWCSREDVRLDARGHVSLDGQGRAVAFGDFVPRALLGRYLQDSYRFLLQRCPAHVQVRHHAEQVLSCQPRSQTPGF RLRTGSLAMNVDGVFLTSGHAPDPHVQQDVGECVVIEGLGLTAMDTLAHLTEGRGGRYVRDGGFAGWRYLPSGREPRVLM CSRSGLPFHARPQWHACRHAPLPRLFFTADAIARLREQREGGRLDFRADVLPLIKDEMRAVFYQARVRMEAPGRLASVQR LLRESISRPAVFARLAEQWGEFEPEHWLSTQPWSGAQDTYGQWFVDWIKRDLALSRLGTAHSPICQALEVWRDYRDLLRL VVDRNGLTESSTLDFYGTWAGLSNRLVGGPQKERHEDLLALIEAGVVTLLPPMSDVQEPRNRLSARVVHSGVSGSRHGLI NDLRKRGLIRAAHAWPADGIDTDAAGRAIGRDGEVQQRLWVLGPAVEGCTFYNHYVPTPDPTCRALIEARRAVESCLDTL TNKTSSGITFQLNKAIQAFN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64585; Mature: 64585
Theoretical pI: Translated: 8.37; Mature: 8.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTHTVAIIGMGSRGLSILEQLIGMSRQDVRQPLRIDVFDPQPPGSGLHLAQQPDYLMLN CCCEEEEEEEECCCCHHHHHHHHCCCHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEEEE TMAGQLSAFSSAFPACEPPGPTFLQWCSREDVRLDARGHVSLDGQGRAVAFGDFVPRALL HHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCEECCCCEEEECCCCCEEEEHHHHHHHHH GRYLQDSYRFLLQRCPAHVQVRHHAEQVLSCQPRSQTPGFRLRTGSLAMNVDGVFLTSGH HHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCEEEECCEEEEECCC APDPHVQQDVGECVVIEGLGLTAMDTLAHLTEGRGGRYVRDGGFAGWRYLPSGREPRVLM CCCCHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCEEECCCCCCCEECCCCCCCCEEE CSRSGLPFHARPQWHACRHAPLPRLFFTADAIARLREQREGGRLDFRADVLPLIKDEMRA EECCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHH VFYQARVRMEAPGRLASVQRLLRESISRPAVFARLAEQWGEFEPEHWLSTQPWSGAQDTY HHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH GQWFVDWIKRDLALSRLGTAHSPICQALEVWRDYRDLLRLVVDRNGLTESSTLDFYGTWA HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHH GLSNRLVGGPQKERHEDLLALIEAGVVTLLPPMSDVQEPRNRLSARVVHSGVSGSRHGLI CCCCCCCCCCCHHHHHHHHHHHHCCHHEECCCHHHHHHHHHHHHHHHHHCCCCCCCCHHH NDLRKRGLIRAAHAWPADGIDTDAAGRAIGRDGEVQQRLWVLGPAVEGCTFYNHYVPTPD HHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEECCCCCCCC PTCRALIEARRAVESCLDTLTNKTSSGITFQLNKAIQAFN HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHCCC >Mature Secondary Structure MQTHTVAIIGMGSRGLSILEQLIGMSRQDVRQPLRIDVFDPQPPGSGLHLAQQPDYLMLN CCCEEEEEEEECCCCHHHHHHHHCCCHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEEEE TMAGQLSAFSSAFPACEPPGPTFLQWCSREDVRLDARGHVSLDGQGRAVAFGDFVPRALL HHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCEECCCCEEEECCCCCEEEEHHHHHHHHH GRYLQDSYRFLLQRCPAHVQVRHHAEQVLSCQPRSQTPGFRLRTGSLAMNVDGVFLTSGH HHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCEEEECCEEEEECCC APDPHVQQDVGECVVIEGLGLTAMDTLAHLTEGRGGRYVRDGGFAGWRYLPSGREPRVLM CCCCHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCEEECCCCCCCEECCCCCCCCEEE CSRSGLPFHARPQWHACRHAPLPRLFFTADAIARLREQREGGRLDFRADVLPLIKDEMRA EECCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHH VFYQARVRMEAPGRLASVQRLLRESISRPAVFARLAEQWGEFEPEHWLSTQPWSGAQDTY HHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH GQWFVDWIKRDLALSRLGTAHSPICQALEVWRDYRDLLRLVVDRNGLTESSTLDFYGTWA HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHH GLSNRLVGGPQKERHEDLLALIEAGVVTLLPPMSDVQEPRNRLSARVVHSGVSGSRHGLI CCCCCCCCCCCHHHHHHHHHHHHCCHHEECCCHHHHHHHHHHHHHHHHHCCCCCCCCHHH NDLRKRGLIRAAHAWPADGIDTDAAGRAIGRDGEVQQRLWVLGPAVEGCTFYNHYVPTPD HHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEECCCCCCCC PTCRALIEARRAVESCLDTLTNKTSSGITFQLNKAIQAFN HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA