| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is mauR [H]
Identifier: 66045943
GI number: 66045943
Start: 3288077
End: 3288964
Strand: Direct
Name: mauR [H]
Synonym: Psyr_2707
Alternate gene names: 66045943
Gene position: 3288077-3288964 (Clockwise)
Preceding gene: 66045940
Following gene: 66045944
Centisome position: 53.96
GC content: 64.64
Gene sequence:
>888_bases ATGCAATATGAAATCACCCACGCCGACCTTTCATTGGTGCTCGCCCTGGTTCGCGGCCGCACGCTGGCACGCGCCGCCGA TCTGTTGCAGGTTGATGTATCGACCGTATTCCGCTCGATCCGTCGCCTGGAAGCAGCCCTCGGTGCAGCGCTGTTTGAAA AGAACCGGCGCGGGTACATACCGACCGATACCGCGCAGGCCATGGCCGAGCAGGCCGAGCGCGCCGAACAGGCGCTTGCT GCTGCGCGCATCGCCCTGCAACAGGGCGAACAGGTCGTCAGCGGCACGGTACGCCTGACCTGTACCGATGCAGTACTGCA TAGCCTGCTATTACCAGCGCTGGCGGACTTCATGCCGCAGTACCCTGCCCTTACGCTGGAGCTGGCCACCTCCAATGCCT TTGCCAACCTCAGCCGTCGCGATGCCGACATCGCCCTGCGCCTGACCAATACGCCACCCGAGCACCTGATCGGACGCTGC CTGGGCAGTGCCGACTACTTTGTCTGTGGCCGAGCCGAATACCGCGAGGCCTTGACGCAGAACCCTGCCTCGATCCCGTG GATCAGCCCGGACGACTCGATGCCCGACCACACCTCGGTAATCTGGCGTAAACAGGCCTTTCCGGGGGTATTACCGAGCT ACCGCTGCAGCAACATGTCGGCAGTCTCGCAGTTGGTCGCTGCCGGCCTGGGCGTCGCGGCGTTGACCGGATTCACGGTC GAGGGCCTTGGAGCGGTCGAACGCCTGAGTGGCCCGCTGGAAGGATGCCGCACCGACCTGTGGCTGCTGACCCGCCCCGA CTGTCGCGCACTGCGTTCTGTGCAGACCCTGCTGGAAGCACTCGCGCCACGACTGCGAGCCGCATTGCAGGTATCCAGCC CCGGCTGA
Upstream 100 bases:
>100_bases GGTCAGCGCCATTTGGACGCTATCCAGCGGGAATGAAACCAGTCTAGGATAGTCATCTGCGCAACAAACATAGGCATTCC GGCAAAGGAACAATGCACCG
Downstream 100 bases:
>100_bases TCAGCCTCTGTGGATCCATTAAATAATAGTTAACAAAATTAATCATTGGATTAATCGCGATCCTGTGGCATTAATAATCA CGAGGAAACAACTTGATTCA
Product: regulatory protein, LysR:LysR, substrate-binding
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MQYEITHADLSLVLALVRGRTLARAADLLQVDVSTVFRSIRRLEAALGAALFEKNRRGYIPTDTAQAMAEQAERAEQALA AARIALQQGEQVVSGTVRLTCTDAVLHSLLLPALADFMPQYPALTLELATSNAFANLSRRDADIALRLTNTPPEHLIGRC LGSADYFVCGRAEYREALTQNPASIPWISPDDSMPDHTSVIWRKQAFPGVLPSYRCSNMSAVSQLVAAGLGVAALTGFTV EGLGAVERLSGPLEGCRTDLWLLTRPDCRALRSVQTLLEALAPRLRAALQVSSPG
Sequences:
>Translated_295_residues MQYEITHADLSLVLALVRGRTLARAADLLQVDVSTVFRSIRRLEAALGAALFEKNRRGYIPTDTAQAMAEQAERAEQALA AARIALQQGEQVVSGTVRLTCTDAVLHSLLLPALADFMPQYPALTLELATSNAFANLSRRDADIALRLTNTPPEHLIGRC LGSADYFVCGRAEYREALTQNPASIPWISPDDSMPDHTSVIWRKQAFPGVLPSYRCSNMSAVSQLVAAGLGVAALTGFTV EGLGAVERLSGPLEGCRTDLWLLTRPDCRALRSVQTLLEALAPRLRAALQVSSPG >Mature_295_residues MQYEITHADLSLVLALVRGRTLARAADLLQVDVSTVFRSIRRLEAALGAALFEKNRRGYIPTDTAQAMAEQAERAEQALA AARIALQQGEQVVSGTVRLTCTDAVLHSLLLPALADFMPQYPALTLELATSNAFANLSRRDADIALRLTNTPPEHLIGRC LGSADYFVCGRAEYREALTQNPASIPWISPDDSMPDHTSVIWRKQAFPGVLPSYRCSNMSAVSQLVAAGLGVAALTGFTV EGLGAVERLSGPLEGCRTDLWLLTRPDCRALRSVQTLLEALAPRLRAALQVSSPG
Specific function: Transcriptional activator of the mau genes involved in methylamine metabolism [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1786401, Length=185, Percent_Identity=26.4864864864865, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI145693193, Length=227, Percent_Identity=24.6696035242291, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1788706, Length=170, Percent_Identity=29.4117647058824, Blast_Score=64, Evalue=8e-12, Organism=Escherichia coli, GI157672245, Length=119, Percent_Identity=31.0924369747899, Blast_Score=63, Evalue=3e-11,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000847 - InterPro: IPR005119 - InterPro: IPR011991 [H]
Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]
EC number: NA
Molecular weight: Translated: 31835; Mature: 31835
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: PS50931 HTH_LYSR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQYEITHADLSLVLALVRGRTLARAADLLQVDVSTVFRSIRRLEAALGAALFEKNRRGYI CCEEECHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PTDTAQAMAEQAERAEQALAAARIALQQGEQVVSGTVRLTCTDAVLHSLLLPALADFMPQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCEEEEEEHHHHHHHHHHHHHHHHCCC YPALTLELATSNAFANLSRRDADIALRLTNTPPEHLIGRCLGSADYFVCGRAEYREALTQ CCCEEEEEECCHHHHHCCCCCCEEEEEECCCCHHHHHHHHHCCCCEEEECCHHHHHHHHC NPASIPWISPDDSMPDHTSVIWRKQAFPGVLPSYRCSNMSAVSQLVAAGLGVAALTGFTV CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCH EGLGAVERLSGPLEGCRTDLWLLTRPDCRALRSVQTLLEALAPRLRAALQVSSPG HHHHHHHHHCCCHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MQYEITHADLSLVLALVRGRTLARAADLLQVDVSTVFRSIRRLEAALGAALFEKNRRGYI CCEEECHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PTDTAQAMAEQAERAEQALAAARIALQQGEQVVSGTVRLTCTDAVLHSLLLPALADFMPQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCEEEEEEHHHHHHHHHHHHHHHHCCC YPALTLELATSNAFANLSRRDADIALRLTNTPPEHLIGRCLGSADYFVCGRAEYREALTQ CCCEEEEEECCHHHHHCCCCCCEEEEEECCCCHHHHHHHHHCCCCEEEECCHHHHHHHHC NPASIPWISPDDSMPDHTSVIWRKQAFPGVLPSYRCSNMSAVSQLVAAGLGVAALTGFTV CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCH EGLGAVERLSGPLEGCRTDLWLLTRPDCRALRSVQTLLEALAPRLRAALQVSSPG HHHHHHHHHCCCHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7957249 [H]