| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66045924
Identifier: 66045924
GI number: 66045924
Start: 3263648
End: 3264058
Strand: Reverse
Name: 66045924
Synonym: Psyr_2688
Alternate gene names: NA
Gene position: 3264058-3263648 (Counterclockwise)
Preceding gene: 66045933
Following gene: 66045923
Centisome position: 53.56
GC content: 58.64
Gene sequence:
>411_bases ATGAACGTCTTCCGAACCCATTGCTCGCCCATTGCCTGGATACTGTACGCCGTTGTCCTGTTCAATGGGCTTGCGTGCAG CATCGGTCACGGTCAGATGATGGCCGCTTTTGCCGGCACTGCAGCGGCTTCGGCTTCTCATGCCGGCCATGGGATGTCAG ATATGCATGGCGGGCATCACACGATGCACATGTCCATGCACGACTCGGCCAGGAAGATGGACATGTCAGGCAGCATGAAG GCACAGTCGGGAGAGTGCTCGTTTGCCGGAACACTGACGCTGACGATGATTTTCTTCGTGGCGCTGGGCTGGCTGATCCG TGTCCGCCGTACTCGTTTTGCGTTGCCCGACCTCTGGCTCGGCAACCTGCCAAGGTATACCCTTCCGGGACTCAATCCAC AGGCCCCTTAG
Upstream 100 bases:
>100_bases TCGGATAACCCATGTCTCCTCGATTATCGGCCCTGCGAGTGCTACTGACCGGCACACCCCGTTCTGTCTAGTTCCGGCCA GAGATGTTAAATTGGTCGCC
Downstream 100 bases:
>100_bases TGCCCATCATGGACGTGTGAGTATCGCTCGCACGAACAGCCGATATTGTCTTTACAGCCTGCCGGAAGGTCATTCCGGCG GGGCGCGTTCATATGTTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MNVFRTHCSPIAWILYAVVLFNGLACSIGHGQMMAAFAGTAAASASHAGHGMSDMHGGHHTMHMSMHDSARKMDMSGSMK AQSGECSFAGTLTLTMIFFVALGWLIRVRRTRFALPDLWLGNLPRYTLPGLNPQAP
Sequences:
>Translated_136_residues MNVFRTHCSPIAWILYAVVLFNGLACSIGHGQMMAAFAGTAAASASHAGHGMSDMHGGHHTMHMSMHDSARKMDMSGSMK AQSGECSFAGTLTLTMIFFVALGWLIRVRRTRFALPDLWLGNLPRYTLPGLNPQAP >Mature_136_residues MNVFRTHCSPIAWILYAVVLFNGLACSIGHGQMMAAFAGTAAASASHAGHGMSDMHGGHHTMHMSMHDSARKMDMSGSMK AQSGECSFAGTLTLTMIFFVALGWLIRVRRTRFALPDLWLGNLPRYTLPGLNPQAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14720; Mature: 14720
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 8.8 %Met (Translated Protein) 11.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 8.8 %Met (Mature Protein) 11.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVFRTHCSPIAWILYAVVLFNGLACSIGHGQMMAAFAGTAAASASHAGHGMSDMHGGHH CCCCHHHCCHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCE TMHMSMHDSARKMDMSGSMKAQSGECSFAGTLTLTMIFFVALGWLIRVRRTRFALPDLWL EEEECCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GNLPRYTLPGLNPQAP CCCCCCCCCCCCCCCC >Mature Secondary Structure MNVFRTHCSPIAWILYAVVLFNGLACSIGHGQMMAAFAGTAAASASHAGHGMSDMHGGHH CCCCHHHCCHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCE TMHMSMHDSARKMDMSGSMKAQSGECSFAGTLTLTMIFFVALGWLIRVRRTRFALPDLWL EEEECCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GNLPRYTLPGLNPQAP CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA