Click here to switch to the map view.

The map label for this gene is arnT [H]

Identifier: 66045933

GI number: 66045933

Start: 3273861

End: 3275342

Strand: Reverse

Name: arnT [H]

Synonym: Psyr_2697

Alternate gene names: 66045933

Gene position: 3275342-3273861 (Counterclockwise)

Preceding gene: 66045935

Following gene: 66045924

Centisome position: 53.75

GC content: 59.85

Gene sequence:

>1482_bases
ATGACTTCTCGTGTGCTTTCACCGTTGCTGTTGTTGCTGGGTGCAATGCTGTTTTTCCTCGCGTTGGGCAATCACCAATT
ACAAAACTCGACAGAACCCCGCGTGGCGGGAATTGCCATGGAAATGCACCTGAGCGGCAACTGGGTTACCCCGAAACTGA
ACGATCAACCGTTCCTGGAAAAGCCGCCGATGAGCGTCTGGCTCGACGCTGCGTCCATCGGGGCGTTCGGTGCGACTCTC
TGGGCGGTCAGGCTCGCGTCCGCCTGTGCGGGGCTGTTCAGCGTGTTGCTGCTGTACAGCATGCTGCGTCGCTTCGGGCG
ACCTGCCTCCGTGGCGTGGGTGGCTGCATTCATGCTCGCGACCCAGGCCAGTTTCTGGAGCAATTCGCGTCAGGTGGGCG
AGGACGCGTTGCTGGCGCTGGGTGTGAGCATGGCGTTGCTGGGGTTCTTTCACGCCAGTCAGCGTTTGCGCAGCGACGGA
TTTCCCGCAGGGGCCTGGCTGCTCTTCGTAGTGGGGATCGCGCTGGCAACCCTGAGCAAGGGTGTGCTGGGCCTCGCGAT
GCCGGGTGTGGTCATTTTCGCCTGGCTGGTGTGCGAGTCGGTGCGGAGCAAACGCATTGTTCCCGTCCACTGGCTACGCC
CGGCGATGTTTACCGTCCTGGCTTTGGTGCCTTTGCTGGTATGGCTGTGCTTTCTATACGGGCAGGGCGGTACGCAGTCG
TTGAAGGACGTGCTCTGGACCAACAGTGTCGGACGCTTTAGTGGTTCGTTCGAAGAGGCAGGGCATTACGAGCCCGTGCA
TTATTACCTGAGCAAACTGCCTGAAGCGTTTTTGCCGTGGAATGTGCTCGTCTATCTGGGGCTGTGGCATTTCCGTAAAC
AGCTGCTGGCCAATCGTTACCTGCTGTTTTTCAGCCTGTGGCTGATCGCGCAGTTCCTGCTGTTGTCGCTGGCCTCGAGT
AAACGCATGGTTTATCTGATGTCACTGGCCCCGGCGGCGGCAGTCATCGCGGCGGAATATGCCTTTGTGTTGGGCGAGCG
CATCAAGGCACGCTCGCAAGGCTCTGCATCTGCAGCGTTTGTGCTACGAAACCGACGGGCGATGACGGTTGCCGGGGCGG
TGTTGATCGTGACGGCGTATCTCGGCGCAGCCATGTGGCTGGAACCGCGAGCGGACCGGCAGTTATCGTTCCTGCCGCTG
ACCGACAAGGTTCATGCTCTGCAGGTCCAGGGACGGCATGTTGTTTTGTTTCAGCCCAGCGAACGGCTGGCAGGGGCCAG
CGTGTTCTACAGCCATAGCTTGCTGGACACGTTCACGTCCAGTGCTGAATTGAGCACCTTTCTGACCCGTGCCGACGGCA
ATGTGGCGCTAATGGAAAGCCTGCAGCCTCCCGAACCACCCTTGCGAATGGTCGACAGCGTCAAGGTCGGCGAGCGTATC
TACTATTTCGTCACTCAGGCTCCAGCGACTGTCGGCAACTGA

Upstream 100 bases:

>100_bases
TGTGCCGCCGGTTAACAATTCTTCAACAATTGGCGACTTATACTTCGCCAGACCGATTCGCTTCTTTGCTTGCCCCCCCG
TCAACCCGGTACCTACCTTG

Downstream 100 bases:

>100_bases
CGGCCACCGGAGCAGGGCCGTTACACAACCTGGCTGCTGACAAGCGGGTTACAGGCCGTCCACTGTTTTTGCGGGATTGG
CAGATCGCATGACTCGCCAC

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: 4-amino-4-deoxy-L-arabinose lipid A transferase; Lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase; Undecaprenyl phosphate-alpha-L-Ara4N transferase [H]

Number of amino acids: Translated: 493; Mature: 492

Protein sequence:

>493_residues
MTSRVLSPLLLLLGAMLFFLALGNHQLQNSTEPRVAGIAMEMHLSGNWVTPKLNDQPFLEKPPMSVWLDAASIGAFGATL
WAVRLASACAGLFSVLLLYSMLRRFGRPASVAWVAAFMLATQASFWSNSRQVGEDALLALGVSMALLGFFHASQRLRSDG
FPAGAWLLFVVGIALATLSKGVLGLAMPGVVIFAWLVCESVRSKRIVPVHWLRPAMFTVLALVPLLVWLCFLYGQGGTQS
LKDVLWTNSVGRFSGSFEEAGHYEPVHYYLSKLPEAFLPWNVLVYLGLWHFRKQLLANRYLLFFSLWLIAQFLLLSLASS
KRMVYLMSLAPAAAVIAAEYAFVLGERIKARSQGSASAAFVLRNRRAMTVAGAVLIVTAYLGAAMWLEPRADRQLSFLPL
TDKVHALQVQGRHVVLFQPSERLAGASVFYSHSLLDTFTSSAELSTFLTRADGNVALMESLQPPEPPLRMVDSVKVGERI
YYFVTQAPATVGN

Sequences:

>Translated_493_residues
MTSRVLSPLLLLLGAMLFFLALGNHQLQNSTEPRVAGIAMEMHLSGNWVTPKLNDQPFLEKPPMSVWLDAASIGAFGATL
WAVRLASACAGLFSVLLLYSMLRRFGRPASVAWVAAFMLATQASFWSNSRQVGEDALLALGVSMALLGFFHASQRLRSDG
FPAGAWLLFVVGIALATLSKGVLGLAMPGVVIFAWLVCESVRSKRIVPVHWLRPAMFTVLALVPLLVWLCFLYGQGGTQS
LKDVLWTNSVGRFSGSFEEAGHYEPVHYYLSKLPEAFLPWNVLVYLGLWHFRKQLLANRYLLFFSLWLIAQFLLLSLASS
KRMVYLMSLAPAAAVIAAEYAFVLGERIKARSQGSASAAFVLRNRRAMTVAGAVLIVTAYLGAAMWLEPRADRQLSFLPL
TDKVHALQVQGRHVVLFQPSERLAGASVFYSHSLLDTFTSSAELSTFLTRADGNVALMESLQPPEPPLRMVDSVKVGERI
YYFVTQAPATVGN
>Mature_492_residues
TSRVLSPLLLLLGAMLFFLALGNHQLQNSTEPRVAGIAMEMHLSGNWVTPKLNDQPFLEKPPMSVWLDAASIGAFGATLW
AVRLASACAGLFSVLLLYSMLRRFGRPASVAWVAAFMLATQASFWSNSRQVGEDALLALGVSMALLGFFHASQRLRSDGF
PAGAWLLFVVGIALATLSKGVLGLAMPGVVIFAWLVCESVRSKRIVPVHWLRPAMFTVLALVPLLVWLCFLYGQGGTQSL
KDVLWTNSVGRFSGSFEEAGHYEPVHYYLSKLPEAFLPWNVLVYLGLWHFRKQLLANRYLLFFSLWLIAQFLLLSLASSK
RMVYLMSLAPAAAVIAAEYAFVLGERIKARSQGSASAAFVLRNRRAMTVAGAVLIVTAYLGAAMWLEPRADRQLSFLPLT
DKVHALQVQGRHVVLFQPSERLAGASVFYSHSLLDTFTSSAELSTFLTRADGNVALMESLQPPEPPLRMVDSVKVGERIY
YFVTQAPATVGN

Specific function: Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG1807

COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 83 family [H]

Homologues:

Organism=Escherichia coli, GI1788591, Length=352, Percent_Identity=26.1363636363636, Blast_Score=82, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022839
- InterPro:   IPR003342 [H]

Pfam domain/function: PF02366 PMT [H]

EC number: =2.4.2.43 [H]

Molecular weight: Translated: 54176; Mature: 54045

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSRVLSPLLLLLGAMLFFLALGNHQLQNSTEPRVAGIAMEMHLSGNWVTPKLNDQPFLE
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEECCCEECCCCCCCCCCC
KPPMSVWLDAASIGAFGATLWAVRLASACAGLFSVLLLYSMLRRFGRPASVAWVAAFMLA
CCCHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
TQASFWSNSRQVGEDALLALGVSMALLGFFHASQRLRSDGFPAGAWLLFVVGIALATLSK
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC
GVLGLAMPGVVIFAWLVCESVRSKRIVPVHWLRPAMFTVLALVPLLVWLCFLYGQGGTQS
CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
LKDVLWTNSVGRFSGSFEEAGHYEPVHYYLSKLPEAFLPWNVLVYLGLWHFRKQLLANRY
HHHHHHCCCCHHCCCCHHHCCCCCHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHH
LLFFSLWLIAQFLLLSLASSKRMVYLMSLAPAAAVIAAEYAFVLGERIKARSQGSASAAF
HHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
VLRNRRAMTVAGAVLIVTAYLGAAMWLEPRADRQLSFLPLTDKVHALQVQGRHVVLFQPS
HHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEEECCCEEEEECCC
ERLAGASVFYSHSLLDTFTSSAELSTFLTRADGNVALMESLQPPEPPLRMVDSVKVGERI
HHHCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHCCEE
YYFVTQAPATVGN
EEEEEECCCCCCC
>Mature Secondary Structure 
TSRVLSPLLLLLGAMLFFLALGNHQLQNSTEPRVAGIAMEMHLSGNWVTPKLNDQPFLE
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEECCCEECCCCCCCCCCC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EEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA