| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66045885
Identifier: 66045885
GI number: 66045885
Start: 3220493
End: 3221476
Strand: Direct
Name: 66045885
Synonym: Psyr_2649
Alternate gene names: NA
Gene position: 3220493-3221476 (Clockwise)
Preceding gene: 66045884
Following gene: 66045886
Centisome position: 52.85
GC content: 53.35
Gene sequence:
>984_bases ATGCCTCGATGGCAACGGAGCAAAATGACCCCAGTAAGCTTGAACTCTGATGAGCTGTCAAAAGAACTGGTGGCCCCCGA TGAAGTGGGCGAGCGGGTCATTATCTACCAAGAAGTCGATGAGAGCGGAGTTGCGACTGGACGTAGTGCGACATTTGCTG ATATTGAGTTCCGTGGCTTGGGGTATGCAGATCTTATAGGGCATACGCTGGGTACTCCCCTAGTCATGCCATTGCGCCTG GCGAATGCTAGGGTCGTTGAGAGCAATTTGCTAGACCTTTCATTAGAGACCCAAGAGACCCAGGTGTCGGTCAGCGCAGT CTTGGATAGCCCGTACTCGTCCAGGGCACTTGGCTTGGTGCGAGATGGCTGGCTACCTTCCGGCATCGCGTTCAGTGATT CGATGATTGTGCTCCCTGACAGATGCGTCTTCAGCGAGTTGGCCGGAAGATTTCGTGCTGGGGAGAAAACAAAATTGGAG GATAAGGACTTCCTTGATTTCCTCATTGGGCGCAAGGTTCGAATCAATCCTCTGTTGTATATGCTTGAAGGCAATCTCAA GAGAAATCCCGACGATGCGAGCATCGAACACCAGTTCGAGGTCGCAACTAAAATTATTAACGCTGCATTGCCATTGGCTC AGATAGTACCGAACGGGCGGGATGGTCTTGAGGGGATAAGAGGCCTTATTCGCGACAGCGAGGCGGGCATGGCGCGCAAG CAGGAATTCCTGACGCGTTTAGCGCCGAAACTGCGGGCTCCGATAGCCGCGCGACGCGTCAATGAGGTCTGGGATGAAGT GTTGGCCACCGCGAAAGCATGTGAAGTCCCAGTACGATCACTTGTCGTGCTGGCTGCCTTGAGCACTGTATGTGTCCCAA ACGGTAAGAGTCCGGCCAAAGGGTTGCTCAAGTTTAACGTAAGGAAATATACGTTTGAGGACGCCTACAACGCCTGGCCG ACCTCCGATCGCTTGAAGTGCTGA
Upstream 100 bases:
>100_bases CAAGCCTCTCGATTGCTGATCCGGGCCTCGGTCAGCGCGTTCTTATGACCAGACGCTGGCACGGCTTTTTGGAGAAAGAT TCGTCGTACGCTTTTTCAGA
Downstream 100 bases:
>100_bases TGCACCTGTTCGCAGCGTTCCCGGATGAGAAGATTCTGCTTTGCACTGGGGATAAGGATCTTGTGCTCTTCTGGGCGGGA ATCAGGCCGTCCGAACTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MPRWQRSKMTPVSLNSDELSKELVAPDEVGERVIIYQEVDESGVATGRSATFADIEFRGLGYADLIGHTLGTPLVMPLRL ANARVVESNLLDLSLETQETQVSVSAVLDSPYSSRALGLVRDGWLPSGIAFSDSMIVLPDRCVFSELAGRFRAGEKTKLE DKDFLDFLIGRKVRINPLLYMLEGNLKRNPDDASIEHQFEVATKIINAALPLAQIVPNGRDGLEGIRGLIRDSEAGMARK QEFLTRLAPKLRAPIAARRVNEVWDEVLATAKACEVPVRSLVVLAALSTVCVPNGKSPAKGLLKFNVRKYTFEDAYNAWP TSDRLKC
Sequences:
>Translated_327_residues MPRWQRSKMTPVSLNSDELSKELVAPDEVGERVIIYQEVDESGVATGRSATFADIEFRGLGYADLIGHTLGTPLVMPLRL ANARVVESNLLDLSLETQETQVSVSAVLDSPYSSRALGLVRDGWLPSGIAFSDSMIVLPDRCVFSELAGRFRAGEKTKLE DKDFLDFLIGRKVRINPLLYMLEGNLKRNPDDASIEHQFEVATKIINAALPLAQIVPNGRDGLEGIRGLIRDSEAGMARK QEFLTRLAPKLRAPIAARRVNEVWDEVLATAKACEVPVRSLVVLAALSTVCVPNGKSPAKGLLKFNVRKYTFEDAYNAWP TSDRLKC >Mature_326_residues PRWQRSKMTPVSLNSDELSKELVAPDEVGERVIIYQEVDESGVATGRSATFADIEFRGLGYADLIGHTLGTPLVMPLRLA NARVVESNLLDLSLETQETQVSVSAVLDSPYSSRALGLVRDGWLPSGIAFSDSMIVLPDRCVFSELAGRFRAGEKTKLED KDFLDFLIGRKVRINPLLYMLEGNLKRNPDDASIEHQFEVATKIINAALPLAQIVPNGRDGLEGIRGLIRDSEAGMARKQ EFLTRLAPKLRAPIAARRVNEVWDEVLATAKACEVPVRSLVVLAALSTVCVPNGKSPAKGLLKFNVRKYTFEDAYNAWPT SDRLKC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36052; Mature: 35921
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRWQRSKMTPVSLNSDELSKELVAPDEVGERVIIYQEVDESGVATGRSATFADIEFRGL CCCCCCCCCCCCCCCHHHHHHHHCCCHHHCCEEEEEEECCCCCCCCCCCCEEEEEEECCC GYADLIGHTLGTPLVMPLRLANARVVESNLLDLSLETQETQVSVSAVLDSPYSSRALGLV CHHHHHHHHHCCCCEEHHHHCCCEEECCCCEEEEECCCHHHEEHHHHHCCCCCCCCHHHH RDGWLPSGIAFSDSMIVLPDRCVFSELAGRFRAGEKTKLEDKDFLDFLIGRKVRINPLLY CCCCCCCCCEECCCEEEECCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCEEEECEEEE MLEGNLKRNPDDASIEHQFEVATKIINAALPLAQIVPNGRDGLEGIRGLIRDSEAGMARK EEECCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHCCCCCCHHHH QEFLTRLAPKLRAPIAARRVNEVWDEVLATAKACEVPVRSLVVLAALSTVCVPNGKSPAK HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCC GLLKFNVRKYTFEDAYNAWPTSDRLKC HHEEEEEHEEEHHHHCCCCCCCCCCCC >Mature Secondary Structure PRWQRSKMTPVSLNSDELSKELVAPDEVGERVIIYQEVDESGVATGRSATFADIEFRGL CCCCCCCCCCCCCCHHHHHHHHCCCHHHCCEEEEEEECCCCCCCCCCCCEEEEEEECCC GYADLIGHTLGTPLVMPLRLANARVVESNLLDLSLETQETQVSVSAVLDSPYSSRALGLV CHHHHHHHHHCCCCEEHHHHCCCEEECCCCEEEEECCCHHHEEHHHHHCCCCCCCCHHHH RDGWLPSGIAFSDSMIVLPDRCVFSELAGRFRAGEKTKLEDKDFLDFLIGRKVRINPLLY CCCCCCCCCEECCCEEEECCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCEEEECEEEE MLEGNLKRNPDDASIEHQFEVATKIINAALPLAQIVPNGRDGLEGIRGLIRDSEAGMARK EEECCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHCCCCCCHHHH QEFLTRLAPKLRAPIAARRVNEVWDEVLATAKACEVPVRSLVVLAALSTVCVPNGKSPAK HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCC GLLKFNVRKYTFEDAYNAWPTSDRLKC HHEEEEEHEEEHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA